Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil

• Published in: Brazilian journal of microbiology Vol. 48; no. 4; pp. 612 - 614
• Main Authors: Melo, Ricardo Rodrigues de, Persinoti, Gabriela Felix, Paixão, Douglas Antonio Alvaredo, Squina, Fábio Márcio, Ruller, Roberto, Sato, Helia Harumi
• Format: Journal Article
• Language: English
• Published: Brazil Elsevier Editora Ltda 01.10.2017; Springer Nature B.V; Elsevier; Sociedade Brasileira de Microbiologia
• Subjects: Actinobacteria; Bacterial Proteins - genetics; Bacterial Proteins - metabolism; Base Composition; Biomass; Brazil; Carbohydrates; Draft genome sequence; Enzymes; Genome Announcement; Genome, Bacterial; Genomes; Glycoside hydrolase; Glycoside hydrolases; Glycoside Hydrolases - genetics; Glycoside Hydrolases - metabolism; MICROBIOLOGY; Multigene Family; Nucleotide sequence; Phylogeny; Proteins; Secretion; Soil bacteria; Soil Microbiology; Soil microorganisms; Soils; Streptomyces; Streptomyces - classification; Streptomyces - enzymology; Streptomyces - genetics; Streptomyces - isolation & purification; Streptomyces; Draft genome sequence; Actinobacteria; Glycoside hydrolases; Soil bacteria
• ISSN: 1517-8382; 1678-4405; 1678-4405
• DOI: 10.1016/j.bjm.2016.11.010

Here, we show the draft genome sequence of Streptomyces sp. F1, a strain isolated from soil with great potential for secretion of hydrolytic enzymes used to deconstruct cellulosic biomass. The draft genome assembly of Streptomyces sp. strain F1 has 69 contigs with a total genome size of 8,142,296bp and G+C 72.65%. Preliminary genome analysis identified 175 proteins as Carbohydrate-Active Enzymes, being 85 glycoside hydrolases organized in 33 distinct families. This draft genome information provides new insights on the key genes encoding hydrolytic enzymes involved in biomass deconstruction employed by soil bacteria.