Paving the Way to Unveil the Diversity and Evolution of Phage Genomes

• Published in: Viruses Vol. 12; no. 9; p. 905
• Main Authors: Reyes, Alejandro, Vives, Martha J
• Format: Journal Article
• Language: English
• Published: Switzerland MDPI AG 19.08.2020; MDPI
• Subjects: Bacteria - virology; Bacteriophages - classification; Bacteriophages - genetics; Bacteriophages - isolation & purification; Bacteriophages - physiology; Biology; Computer applications; E coli; Evolution; Evolution, Molecular; Experiments; Genetic diversity; Genetic Variation; Genome, Viral; Genomes; Host range; Methods; Molecular evolution; molecular methods; Molecular modelling; Mutation; next generation sequencing; Phages; Phylogenetics; Research methodology; Researchers; Salmonella; Studies; viral diversity; viral evolution; viromes; Viruses; molecular methods; viral evolution; viral diversity; viromes; next generation sequencing
• ISSN: 1999-4915; 1999-4915
• DOI: 10.3390/v12090905

Phage biology has been developing for the last hundred years, and the potential of phages as tools and treatments has been known since their early discovery. However, the lack of knowledge of the molecular mechanisms coded in phage genomes hindered the development of the field. With current molecular methods, the last decade has been a resurgence of the field. The Special Issue on "Diversity and Evolution of Phage Genomes" is a great example with its 17 manuscripts published. It covers some of the latest methods to sample and characterize environmental and host associated viromes, considering experimental biases and computational developments. Furthermore, the use of molecular tools coupled with traditional methods has allowed to isolate and characterize viruses from different hosts and environments with such diversity that even a new viral class is being proposed. The viruses described cover all different phage families and lifestyles. However, is not only about diversity; the molecular evolution is studied in a set of manuscripts looking at phage-host interactions and their capacity to uncover the frequency and type of mutations behind the bacterial resistance mechanisms and viral pathogenesis, and such methods are opening new ways into identifying potential receptors and characterizing the bacterial host range.