Genomic analyses of the Daphnia pulex peptidome

• Published in: General and comparative endocrinology Vol. 171; no. 2; pp. 131 - 150
• Main Authors: Christie, Andrew E, McCoole, Matthew D, Harmon, Sarah M, Baer, Kevin N, Lenz, Petra H
• Format: Journal Article
• Language: English
• Published: United States Elsevier Inc 01.04.2011
• Subjects: A-type allatostatin (AST-A); adipokinetic hormone; Adipokinetic hormone (AKH); allatostatin; allatotropin; Allatotropin (ATR); Animals; B-type allatostatin (AST-B); Bursicon α; Bursicon β; C-type allatostatin (AST-C); Calcitonin-like diuretic hormone (CLDH); Cladocera; Corazonin; Crustacea; Crustacean cardioactive peptide (CCAP); Crustacean hyperglycemic hormone (CHH); Daphnia - genetics; Daphnia pulex; diuretic hormone; Ecdysis-triggering hormone (ETH); eclosion hormone; Eclosion hormone (EH); Endocrinology & Metabolism; FMRFamide-like peptide (FLP); Freshwater; genes; Genome; Genome - genetics; genome mining; Insulin-like peptide (ILP); Invertebrate Hormones - genetics; Molt-inhibiting hormone (MIH); Neurohormone; Neuropeptide; Neuropeptide F (NPF); Neuropeptides - genetics; Oligopeptides - genetics; Orcokinin; Pigment-dispersing hormone (PDH); prediction; Proctolin; Red pigment concentrating hormone (RPCH); red pigment-concentrating hormone; Short neuropeptide F (sNPF); SIFamide; Sulfakinin; Tachykinin-related peptide (TRP); Transcriptome; Bursicon α; Proctolin; Bursicon β; Cladocera; Transcriptome; A-type allatostatin (AST-A); Orcokinin; Neuropeptide; Crustacea; Crustacean cardioactive peptide (CCAP); Pigment-dispersing hormone (PDH); Tachykinin-related peptide (TRP); Allatotropin (ATR); Daphnia pulex; Crustacean hyperglycemic hormone (CHH); Sulfakinin; Short neuropeptide F (sNPF); Corazonin; FMRFamide-like peptide (FLP); Adipokinetic hormone (AKH); SIFamide; Insulin-like peptide (ILP); Ecdysis-triggering hormone (ETH); Molt-inhibiting hormone (MIH); Eclosion hormone (EH); B-type allatostatin (AST-B); C-type allatostatin (AST-C); Calcitonin-like diuretic hormone (CLDH); Neurohormone; Neuropeptide F (NPF); Genome; Red pigment concentrating hormone (RPCH)
• ISSN: 0016-6480; 1095-6840
• DOI: 10.1016/j.ygcen.2011.01.002

Research highlights ► This is the first characterization of a crustacean peptidome based on a fully sequenced genome. ► 24 genes, representing 23 distinct peptide families/subfamilies, were identified. ► 96 peptides were predicted, including the first crustacean isoform of allatotropin.