The complete mitochondrial genomes of two sibling species of camellia weevils (Coleoptera: Curculionidae) and patterns of Curculionini speciation

• Published in: Scientific reports Vol. 9; no. 1; p. 3412
• Main Authors: Zhang, Shou-Ke, Shu, Jin-Ping, Wang, Yang-Dong, Liu, Ya-Ning, Peng, Han, Zhang, Wei, Wang, Hao-Jie
• Format: Journal Article
• Language: English
• Published: England Nature Publishing Group 04.03.2019; Nature Publishing Group UK
• Subjects: Bayesian analysis; Binding sites; Curculio; Curculionidae; Genomes; Homology; Mitochondria; Nucleic acids; Phylogeny; Protein structure; Secondary structure; Sibling species; Speciation; tRNA
• ISSN: 2045-2322; 2045-2322
• DOI: 10.1038/s41598-019-39895-8

Complete mitochondrial genomes contain large and diverse datasets for species delineation. To better understand the divergence of the two morphologically indistinguishable weevil species in Curculionini, we first sequenced and compared their complete mitochondrial genomes. The complete mitochondrial genomes of Curculio chinensis and Curculio sp. were 19,713 bp with an A + T content of 76.61% and 19,216 bp with an A + T content of 76.85%, respectively. All 37 of the typical mitochondrial genes were determined in both species. The 13 protein sequences of the two species shared high homology (about 90%) except for ATP8 (73.08%). The differences in secondary structure of ATP8 were the number of possible proteins and nucleic acid binding sites. There were 22 and 15 mismatched base-pairs in the tRNA secondary structures from C. chinensis and Curculio sp., respectively. Maximum Likelihood and Bayesian analyses indicated that Curculio sp. is a novel species closely related to C. chinensis. The divergence time estimation suggests that Cryptorhynchinae and Curculionini lines diverged in the Cenozoic Period, while C. chinensis and Curculio sp. diverged at 6.7079 (95% CI 5-13) Mya. This study demonstrates the utility of using complete mitochondrial gene sets for phylogenetic analysis and enhances our understanding of the genetic basis for the evolution of the Curculionini.