Bioinformatics Identification of the Expression and Clinical Significance of E2F Family in Endometrial Cancer

• Published in: Frontiers in genetics Vol. 11; p. 557188
• Main Authors: Zhang, YunZheng, Wang, Zihao, Ma, Jian, Huo, JiaNing, Li, YiBing, Wang, YuShan, Chen, Hao, Shan, LuHe, Ma, Xiaoxin
• Format: Journal Article
• Language: English
• Published: Switzerland Frontiers Media S.A 04.11.2020
• Subjects: bioinformatics analysis; biomarker; E2Fs; endometrial cancer; Genetics; immune infiltration; endometrial cancer; E2Fs; immune infiltration; biomarker; bioinformatics analysis
• ISSN: 1664-8021; 1664-8021
• DOI: 10.3389/fgene.2020.557188

Besides being one of the most prevalent cancers among women, incidence and mortality rates of endometrial cancer (EC) are still increasing. The E2F family of transcriptional factors is involved in cell differentiation, apoptosis, and inhibition of DNA damage response, thus affecting growth and invasion of tumor cells. We used multiple bioinformatics tools to explore the role of E2F family in endometrial cancer. The expression of E2F1/2/3/7/8 was significantly upregulated in endometrial cancer tissues, converse to E2F4, which was downregulated. Methylation downregulates all E2Fs except for E2F2. Accordingly, E2F1/2/3/5/7/8 are potential diagnostic biomarkers for EC. In particular, EC patients displaying upregulated E2F1, and E2F3 expression had a worse overall survival and relapse-free survival. E2F8, E2F7, and E2F1 were the top three, most-frequently altered genes in endometrial cancer. E2F family activates apoptosis pathways, regulates cell cycle, and impairs DNA damage response pathways. Drug-sensitivity analysis demonstrated that the level of E2F2/3/8 negatively correlated with drug resistance. Meanwhile, immune infiltrations analysis revealed that E2F family is associated with recruitment of several immune cells. Enrichment analysis on its part revealed that the E2F family is mainly associated with cell cycle, sequence-specific DNA binding, nuclear transcription factor complex, PI3K-Akt signaling, and p53 signaling pathway. We also identified multiple E2Fs-associated miRNA and kinase targets in endometrial cancer. Our study revealed the unique expression signature and clinical significance of E2F family in EC, demonstrating the potential clinical utility of these transcription factors (TF) in endometrial cancer.