Association of BLK and BANK1 Polymorphisms and Interactions With Rheumatoid Arthritis in a Latin-American Population
has been identified as a risk factor to rheumatoid arthritis (RA) primarily in Asian or European-derived populations. However, this finding has not been evaluated in other populations such as Latin-Americans, except for Colombians. On the other hand, single nucleotide variants (SNVs) have been scarc...
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Published in | Frontiers in genetics Vol. 11; p. 58 |
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Main Authors | , , , , , , |
Format | Journal Article |
Language | English |
Published |
Switzerland
Frontiers Media S.A
20.02.2020
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Subjects | |
Online Access | Get full text |
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Summary: | has been identified as a risk factor to rheumatoid arthritis (RA) primarily in Asian or European-derived populations. However, this finding has not been evaluated in other populations such as Latin-Americans, except for Colombians. On the other hand,
single nucleotide variants (SNVs) have been scarcely studied in RA patients.
The aim of this study was to determine whether the BLK rs2736340T/C, rs13277113A/G, and BANK1 rs10516487G/A (R61H) and rs3733197G/A (A383T) polymorphisms are risk factors to RA in a sample of patients from Central Mexico.
We studied 957 women; 487 controls and 470 patients with RA by means of a TaqMan® SNP genotyping assay with fluorescent probes for the
rs13277113A/G, rs2736340T/C and
10516487G/A (R61H) and rs3733197G/A (A383T) variants.
The
rs2736340T/C and rs13277113A/G variants were associated with risk for RA: C vs T; OR 1.39,
= 0.001, and G vs A; OR 1.37,
= 0.004, respectively. In addition, there was also an association between
R61H and RA: A vs G; OR 1.49,
= 0.003, but no with
A383T. We also identified an interaction significant between genotypes of
rs2736340T/C-
rs10516487G/A and RA: OR 1.65,
= 0.0001.
Our data suggest that both
and
confer susceptibility to RA in Mexican patients. The individual association of
rs1054857G/A with RA had not been previously reported in a particular population (except for pooled patients from several countries), therefore, our study presents the first evidence of association between this
variant and RA. |
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Bibliography: | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 Reviewed by: Guillaume Lettre, Université de Montréal, Canada; Armand Valsesia, Nestle Institute of Health Sciences (NIHS), Switzerland This article was submitted to Genomic Medicine, a section of the journal Frontiers in Genetics Edited by: Taru Tukiainen, Institute for Molecular Medicine Finland (FIMM), Finland |
ISSN: | 1664-8021 1664-8021 |
DOI: | 10.3389/fgene.2020.00058 |