In situ kinetic measurements of α-synuclein aggregation reveal large population of short-lived oligomers

• Published in: PloS one Vol. 16; no. 1; p. e0245548
• Main Authors: Zurlo, Enrico, Kumar, Pravin, Meisl, Georg, Dear, Alexander J, Mondal, Dipro, Claessens, Mireille M A E, Knowles, Tuomas P J, Huber, Martina
• Format: Journal Article
• Language: English
• Published: United States Public Library of Science 2021; Public Library of Science (PLoS)
• Subjects: Agglomeration; Biology and Life Sciences; Chemistry; Diseases; Editing; Experiments; Fluorescence; Intermediates; Labeling; Labelling; Labels; Laboratories; Membrane trafficking; Membranes; Methodology; Methods; Mutagenesis; Oligomers; Physical Sciences; Physics; Protein expression; Protein structure; Proteins; Research and Analysis Methods; Roads; Room temperature; Science and technology; Signal to noise ratio; Simulation; Synuclein; Time measurement; Visualization; United Kingdom > UK; Netherlands; Germany
• ISSN: 1932-6203; 1932-6203
• DOI: 10.1371/journal.pone.0245548

Knowledge of the mechanisms of assembly of amyloid proteins into aggregates is of central importance in building an understanding of neurodegenerative disease. Given that oligomeric intermediates formed during the aggregation reaction are believed to be the major toxic species, methods to track such intermediates are clearly needed. Here we present a method, electron paramagnetic resonance (EPR), by which the amount of intermediates can be measured over the course of the aggregation, directly in the reacting solution, without the need for separation. We use this approach to investigate the aggregation of α-synuclein (αS), a synaptic protein implicated in Parkinson's disease and find a large population of oligomeric species. Our results show that these are primary oligomers, formed directly from monomeric species, rather than oligomers formed by secondary nucleation processes, and that they are short-lived, the majority of them dissociates rather than converts to fibrils. As demonstrated here, EPR offers the means to detect such short-lived intermediate species directly in situ. As it relies only on the change in size of the detected species, it will be applicable to a wide range of self-assembling systems, making accessible the kinetics of intermediates and thus allowing the determination of their rates of formation and conversion, key processes in the self-assembly reaction.