The first complete chloroplast genome of Alsophila costularis (Cyatheaceae), a least concerned relict tree fern

It is the first report on complete chloroplast genome of Alsophila costularis, a least concerned relict tree fern. The genome size is 156,675 bp, with the typical quadripartite structure containing a pair of inverted repeats (IRs) of 24,356 bp separated by a large single-copy (LSC) region and a smal...

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Bibliographic Details
Published inMitochondrial DNA. Part B. Resources Vol. 4; no. 1; pp. 1897 - 1898
Main Authors Wang, Ting, He, Ziqing, Wang, Zhen, Sun, Xinyao, Su, Yingjuan
Format Journal Article
LanguageEnglish
Published Abingdon Taylor & Francis 02.01.2019
Taylor & Francis Ltd
Taylor & Francis Group
Subjects
a least concerned relict tree fern
Alsophila
Alsophila costularis
chloroplast genome
Chloroplasts
Ferns
Genomes
Phylogeny
Pseudogenes
rRNA
tRNA
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Summary:It is the first report on complete chloroplast genome of Alsophila costularis, a least concerned relict tree fern. The genome size is 156,675 bp, with the typical quadripartite structure containing a pair of inverted repeats (IRs) of 24,356 bp separated by a large single-copy (LSC) region and a small single-copy (SSC) region of 86,338 bp and 21,625 bp, respectively. A total of 133 genes are predicted, including 89 protein-coding genes, eight ribosomal RNA genes, 33 tRNA genes, and three pseudogenes. The ML phylogenetic tree revealed A. costularisis as sister to Alsophila spinulosa.
ISSN:2380-2359
2380-2359
DOI:10.1080/23802359.2019.1614888