The Complete Chloroplast Genome Of Castanopsis Fargesii Franch. (Fagaceae)

Castanopsis fargesii (Fagaceae) is a major dominant tree species in evergreen broad-leaved forests of subtropical China, with significant ecological and economical values. The complete chloroplast genome sequences of C. fargesii was reported based on the Illumina Hiseq 2500 platform. The complete ch...

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Bibliographic Details
Published inMitochondrial DNA. Part B. Resources Vol. 4; no. 1; pp. 1656 - 1657
Main Authors Ye, Xue-Min, Guo, Yang-Ping, Lei, Xian-Gao, Sun, Rong-Xi
Format Journal Article
LanguageEnglish
Published Abingdon Taylor & Francis 02.01.2019
Taylor & Francis Ltd
Taylor & Francis Group
Subjects
Castanopsis
Castanopsis fargesii
chloroplast genome
Chloroplasts
Coniferous forests
Dominant species
Fagaceae
Genomes
phylogenetic analysis
Phylogeny
rRNA
Transfer RNA
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Summary:Castanopsis fargesii (Fagaceae) is a major dominant tree species in evergreen broad-leaved forests of subtropical China, with significant ecological and economical values. The complete chloroplast genome sequences of C. fargesii was reported based on the Illumina Hiseq 2500 platform. The complete chloroplast genome was 160,601 bp with a typical quadripartite structure, containing a pair of inverted repeated (IR) regions (25,693 bp) that was separated by a large single copy (LSC) region of 90,258 bp, and a small single copy (SSC) region of 18,987 bp. It harbours 123 functional genes, including 78 protein-coding genes, 37 transfer RNA and 8 ribosomal RNA genes. The ML phylogenetic analysis indicated C. fargesii is closely related to Castanopsis hainanensis.
ISSN:2380-2359
2380-2359
DOI:10.1080/23802359.2019.1605850