CRISPR/Cas9-mediated SARM1 knockout and epitope-tagged mice reveal that SARM1 does not regulate nuclear transcription, but is expressed in macrophages

• Published in: The Journal of biological chemistry Vol. 297; no. 6; p. 101417
• Main Authors: Doran, Ciara G., Sugisawa, Ryoichi, Carty, Michael, Roche, Fiona, Fergus, Claire, Hokamp, Karsten, Kelly, Vincent P., Bowie, Andrew G.
• Format: Journal Article
• Language: English
• Published: United States Elsevier Inc 01.12.2021; American Society for Biochemistry and Molecular Biology
• Subjects: Animals; Armadillo Domain Proteins - biosynthesis; Armadillo Domain Proteins - genetics; axon degeneration; chemokines; CRISPR-Cas Systems; CRISPR/Cas9; Cytoskeletal Proteins - biosynthesis; Cytoskeletal Proteins - genetics; Epitopes - genetics; Epitopes - metabolism; Gene Expression Regulation; innate immunity; Macrophages - metabolism; Mice; Mice, Knockout; Neurons - metabolism; passenger genes; SARM1; transcription; Transcription, Genetic; Vincristine - metabolism; BCA; transcription; CRISPR/Cas9; axon degeneration; DEG; BMDM; chemokines; passenger genes; LPS; innate immunity; SARM1; IGV; TLR; TIR; SAM
• ISSN: 0021-9258; 1083-351X
• DOI: 10.1016/j.jbc.2021.101417

SARM1 is a toll/interleukin-1 receptor -domain containing protein, with roles proposed in both innate immunity and neuronal degeneration. Murine SARM1 has been reported to regulate the transcription of chemokines in both neurons and macrophages; however, the extent to which SARM1 contributes to transcription regulation remains to be fully understood. Here, we identify differential gene expression in bone-marrow-derived macrophages (BMDMs) from C57BL/6 congenic 129 ES cell-derived Sarm1−/− mice compared with wild type (WT). However, we found that passenger genes, which are derived from the 129 donor strain of mice that flank the Sarm1 locus, confound interpretation of the results, since many of the identified differentially regulated genes come from this region. To re-examine the transcriptional role of SARM1 in the absence of passenger genes, here we generated three Sarm1−/− mice using CRISPR/Cas9. Treatment of neurons from these mice with vincristine, a chemotherapeutic drug causing axonal degeneration, confirmed SARM1's function in that process; however, these mice also showed that lack of SARM1 has no impact on transcription of genes previously shown to be affected such as chemokines. To gain further insight into SARM1 function, we generated an epitope-tagged SARM1 mouse. In these mice, we observed high SARM1 protein expression in the brain and brainstem and lower but detectable levels in macrophages. Overall, the generation of these SARM1 knockout and epitope-tagged mice has clarified that SARM1 is expressed in mouse macrophages yet has no general role in macrophage transcriptional regulation and has provided important new models to further explore SARM1 function.