Study of Genetic Diversity of Killer Cell Immunoglobulin-like Receptor Loci in the Tujia Ethnic Minority

• Published in: Human immunology Vol. 77; no. 10; pp. 869 - 875
• Main Authors: Wang, Hong-Dan, Feng, Zhan-Qi, Shen, Chun-Mei, Guo, Qian-Nan, Dai, Peng-Fei, Zhang, Yu-Dang, Guo, Yu-Xin, Yan, Jiang-Wei, Zhu, Bo-Feng, Zhang, Li
• Format: Journal Article
• Language: English
• Published: United States Elsevier Inc 01.10.2016
• Subjects: Allergy and Immunology; Asian Continental Ancestry Group; China; Ethnic Groups; Gene Frequency; Genetic diversity; Genetics, Population; Genotype; Humans; Killer cell immunoglobulin-like receptors (KIRs); Killer Cells, Natural - immunology; Linkage Disequilibrium; PCR-SSP; Polymorphism, Genetic; Pseudogenes - genetics; Receptors, KIR - genetics; Tujia ethnic minority; PCR-SSP; Tujia ethnic minority; Genetic diversity; Killer cell immunoglobulin-like receptors (KIRs)
• ISSN: 0198-8859; 1879-1166
• DOI: 10.1016/j.humimm.2016.06.015

Abstract The aim of this study was to analyze the genetic profiles of 14 killer cell immunoglobulin-like receptor ( KIR ) genes and 2 pseudogenes of 124 individuals from Tujia ethnic minority residing in Enshi Tujia and Miao autonomous prefecture of Hubei province of China and investigate the genetic relationships between the Tujia ethnic minority and other reported groups for the first time. Sequence specific primer amplification (PCR-SSP) methods were used to genotype the 14 KIR genes and 2 pseudogenes. The observed carrier frequencies (OF) and the gene frequencies (GF) of the KIR genes were measured. Neighbor-joining (N-J) tree and the principal component analysis (PCA) plot were constructed. All individuals were typed positive for the three framework loci KIR3DL3 , 2DL4 and 3DL2 , as well as for pseudogene KIR3DP1 . The gene frequencies of the other KIR genes ranged from 9% in KIR2DS2 to 98% in KIR2DP1 and KIR3DL1 . The present study of the KIR genes may be a powerful tool for enriching the Chinese ethnical gene information resources of the KIR gene pool, as well as for the anthropological research.