Plant snoRNA database

The Plant snoRNA database (http://www.scri.sari.ac.uk/plant_snoRNA/) provides information on small nucleolar RNAs from Arabidopsis and eighteen other plant species. Information includes sequences, expression data, methylation and pseudouridylation target modification sites, initial gene organization...

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Published inNucleic acids research Vol. 31; no. 1; pp. 432 - 435
Main Authors Brown, John W. S., Echeverria, Manuel, Qu, Liang-Hu, Lowe, Todd M., Bachellerie, Jean-Pierre, Hüttenhofer, Alexander, Kastenmayer, James P., Green, Pamela J., Shaw, Paul, Marshall, Dave F.
Format Journal Article
LanguageEnglish
Published England Oxford University Press 01.01.2003
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Summary:The Plant snoRNA database (http://www.scri.sari.ac.uk/plant_snoRNA/) provides information on small nucleolar RNAs from Arabidopsis and eighteen other plant species. Information includes sequences, expression data, methylation and pseudouridylation target modification sites, initial gene organization (polycistronic, single gene and intronic) and the number of gene variants. The Arabidopsis information is divided into box C/D and box H/ACA snoRNAs, and within each of these groups, by target sites in rRNA, snRNA or unknown. Alignments of orthologous genes and gene variants from different plant species are available for many snoRNA genes. Plant snoRNA genes have been given a standard nomenclature, designed wherever possible, to provide a consistent identity with yeast and human orthologues.
Bibliography:Received August 15, 2002; Accepted August 25, 2002
To whom correspondence should be addressed. Tel: +44 1382 568533; Fax: +44 1382 562426; Email: jbrown@scri.sari.ac.uk
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ISSN:0305-1048
1362-4962
1362-4962
DOI:10.1093/nar/gkg009