Awakening the HSC: Dynamic Modeling of HSC Maintenance Unravels Regulation of the TP53 Pathway and Quiescence

• Published in: Frontiers in physiology Vol. 11; p. 848
• Main Authors: Ikonomi, Nensi, Kühlwein, Silke D., Schwab, Julian D., Kestler, Hans A.
• Format: Journal Article
• Language: English
• Published: Frontiers Media S.A 31.07.2020
• Subjects: Boolean network; dynamic modeling; hematopoietic stem cell; maintenance of quiescence; Physiology; stem cell awakening; TP53
• ISSN: 1664-042X; 1664-042X
• DOI: 10.3389/fphys.2020.00848

Hematopoietic stem cells (HSCs) provide all types of blood cells during the entire life of the organism. HSCs are mainly quiescent and can eventually enter the cell cycle to differentiate. HSCs are maintained and tightly regulated in a particular environment. The stem cell niche regulates dormancy and awakening. Deregulations of this interplay can lead to hematopoietic failure and diseases. In this paper, we present a Boolean network model that recapitulates HSC regulation in virtue of external signals coming from the niche. This Boolean network integrates and summarizes the current knowledge of HSC regulation and is based on extensive literature research. Furthermore, dynamic simulations suggest a novel systemic regulation of TP53 in homeostasis. Thereby, our model indicates that TP53 activity is balanced depending on external stimulations, engaging a regulatory mechanism involving ROS regulators and RAS activated transcription factors. Finally, we investigated different mouse models and compared them to in silico knockout simulations. Here, the model could recapitulate in vivo observed behaviors and thus sustains our results.