Identification of Autism Spectrum Disorder Using Topological Data Analysis

• Published in: Journal of digital imaging Vol. 37; no. 3; pp. 1023 - 1037
• Main Authors: Zhang, Xudong, Gao, Yaru, Zhang, Yunge, Li, Fengling, Li, Huanjie, Lei, Fengchun
• Format: Journal Article
• Language: English
• Published: Cham Springer International Publishing 01.06.2024; Springer Nature B.V
• Subjects: Accuracy; Algorithms; Autism; Autism Spectrum Disorder - diagnosis; Autism Spectrum Disorder - epidemiology; Brain; Brain - diagnostic imaging; Brain - pathology; Child; Complexity; Data analysis; Data exchange; Databases, Factual; Homogeneity; Humans; Imaging; Magnetic Resonance Imaging; Mathematical models; Medicine; Medicine & Public Health; Neuroimaging; Radiology; Representations; Topology; ABIDE; Persistent homology; Topological data analysis; Autism spectrum disorder; Machine learning
• ISSN: 2948-2933; 0897-1889; 2948-2925; 2948-2933; 1618-727X
• DOI: 10.1007/s10278-024-01002-3

Autism spectrum disorder (ASD) is a pervasive brain development disease. Recently, the incidence rate of ASD has increased year by year and posed a great threat to the lives and families of individuals with ASD. Therefore, the study of ASD has become very important. A suitable feature representation that preserves the data intrinsic information and also reduces data complexity is very vital to the performance of established models. Topological data analysis (TDA) is an emerging and powerful mathematical tool for characterizing shapes and describing intrinsic information in complex data. In TDA, persistence barcodes or diagrams are usually regarded as visual representations of topological features of data. In this paper, the Regional Homogeneity (ReHo) data of subjects obtained from Autism Brain Imaging Data Exchange (ABIDE) database were used to extract features by using TDA. The average accuracy of cross validation on ABIDE I database was 95.6% that was higher than any other existing methods (the highest accuracy among existing methods was 93.59%). The average accuracy for sampling with the same resolutions with the ABIDE I on the ABIDE II database was 96.5% that was also higher than any other existing methods (the highest accuracy among existing methods was 75.17%).