Effect of Pseudorepeat Rearrangement on α-Synuclein Misfolding, Vesicle Binding, and Micelle Binding

• Published in: Journal of molecular biology Vol. 390; no. 3; pp. 516 - 529
• Main Authors: Rao, Jampani Nageswara, Kim, Yujin E., Park, Leena S., Ulmer, Tobias S.
• Format: Journal Article
• Language: English
• Published: England Elsevier Ltd 17.07.2009
• Subjects: alpha-Synuclein - chemistry; alpha-Synuclein - genetics; alpha-Synuclein - metabolism; DNA Shuffling; membrane proteins; Micelles; Microscopy, Electron, Transmission; Models, Biological; Models, Molecular; NMR spectroscopy; Nuclear Magnetic Resonance, Biomolecular; Protein Binding; Protein Conformation; Protein Folding; protein misfolding; Recombination, Genetic; Repetitive Sequences, Amino Acid - genetics; sodium lauroyl sarcosinate; α-synuclein; SaS; NOE; sodium lauroyl sarcosinate; LUV; SLAS; bS; aS; membrane proteins; SUV; protein misfolding; LPPG; MFR; NMR spectroscopy; α-synuclein
• ISSN: 0022-2836; 1089-8638
• DOI: 10.1016/j.jmb.2009.05.058

The pathological and physiological hallmarks of the protein α-synuclein (aS) are its misfolding into cytotoxic aggregates and its binding to synaptic vesicles, respectively. Both events are mediated by seven 11-residue amphiphilic pseudorepeats and, most generally, involve a transition from intrinsically unstructured conformations to structured conformations. Based on aS interactions with aggregation-inhibiting small molecules, an aS variant termed shuffled α-synuclein (SaS), wherein the first six pseudorepeats had been rearranged, was introduced. Here, the effects of this rearrangement on misfolding, vesicle binding, and micelle binding are examined in reference to aS and β-synuclein to study the sequence characteristics underlying these processes. Fibrillization correlates with the distinct clustering of residues with high β-sheet propensities, while vesicle affinities depend on the mode of pseudorepeat interchange and loss. In the presence of micelles, the pseudorepeat region of SaS adopts an essentially continuous helix, whereas aS and β-synuclein encounter a distinct helix break, indicating that a more homogeneous distribution of surfactant affinities in SaS prevented the formation of an extensive helix break in the micelle-bound state. By demonstrating the importance of the distribution of β-sheet propensities and by revealing inhomogeneous aS surfactant affinities, the present study provides novel insights into two central themes of synuclein biology.