The complete chloroplast genome sequence of Senna tora and phylogenetic analysis

The complete chloroplast genome sequence of Senna tora was characterized from Illumina pair-end sequencing. The chloroplast genome of S. tora was 161,050 bp in length, containing a large single-copy region (LSC) of 90,411 bp, a small single-copy region (SSC) of 18,537 bp, and two inverted repeat (IR...

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Published inMitochondrial DNA. Part B. Resources Vol. 5; no. 3; pp. 3415 - 3417
Main Authors Xu, Qing, Ma, Lirong, Chen, Guo
Format Journal Article
LanguageEnglish
Published England Taylor & Francis 29.09.2020
Taylor & Francis Ltd
Taylor & Francis Group
Subjects
chloroplast genome
Chloroplasts
genetic information
Genomes
Inverted repeat
Mitogenome Announcement
Nucleotide sequence
phylogenetic analysis
Phylogenetics
Phylogeny
S. tora
Senna tora
S. tora
phylogenetic analysis
genetic information
chloroplast genome
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Summary:The complete chloroplast genome sequence of Senna tora was characterized from Illumina pair-end sequencing. The chloroplast genome of S. tora was 161,050 bp in length, containing a large single-copy region (LSC) of 90,411 bp, a small single-copy region (SSC) of 18,537 bp, and two inverted repeat (IR) regions of 26,050 bp. The overall GC content is 36.20%, while the correponding values of the LSC, SSC, and IR regions are 64.5%, 69.4%, and 60.2%, respectively. The genome contains 129 complete genes, including 8 rRNAs, 37 tRNAs and 84 protein coding genes. The Neighbour-joining phylogenetic analysis showed that S. tora and S. bicapsularis clustered together as sisters to other Senna species.
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ISSN:2380-2359
2380-2359
DOI:10.1080/23802359.2020.1781573