Enhancing the Predictions of Cytomegalovirus Infection in Severe Ulcerative Colitis Using a Deep Learning Ensemble Model: Development and Validation Study

• Published in: JMIR medical informatics Vol. 13; p. e64987
• Main Authors: Kim, Jeong Heon, Choe, A Reum, Byeon, Ju Ran, Park, Yehyun, Song, Eun Mi, Kim, Seong-Eun, Jeong, Eui Sun, Lee, Rena, Kim, Jin Sung, Ahn, So Hyun, Jung, Sung Ae
• Format: Journal Article
• Language: English
• Published: Canada JMIR Publications 01.07.2025
• Subjects: Accuracy; Artificial intelligence; Automation; Biopsy; Blood tests; Clinical Information and Decision Making; Clinical outcomes; Colitis, Ulcerative - complications; Colitis, Ulcerative - virology; Colorectal surgery; Cytomegalovirus; Cytomegalovirus Infections - diagnosis; Datasets; Decision Support for Health Professionals; Deep Learning; Endoscopy; Female; Gastroenterology and Hepatology; Herpes viruses; Humans; Imaging Informatics; Infections; Infectious Diseases (non-STD/STI); Inflammatory bowel disease; Intervention; Machine Learning; Male; Medical imaging; Morphology; Ontologies, Classifications, and Coding; Original Paper; Patients; Validation studies; Viral infections; deep learning; endoscopy; ulcerative colitis; cytomegalovirus; classification
• ISSN: 2291-9694; 2291-9694
• DOI: 10.2196/64987

Cytomegalovirus (CMV) reactivation in patients with severe ulcerative colitis (UC) leads to worse outcomes; yet, early detection remains challenging due to the reliance on time-intensive biopsy procedures. This study explores the use of deep learning to differentiate CMV from severe UC through endoscopic imaging, offering a potential noninvasive diagnostic tool. We analyzed 86 endoscopic images using an ensemble of deep learning models, including DenseNet (Densely Connected Convolutional Network) 121 pretrained on ImageNet. Advanced preprocessing and test-time augmentation (TTA) were applied to optimize model performance. The models were evaluated using metrics such as accuracy, precision, recall, F1-score, and area under the curve. The ensemble approach, enhanced by TTA, achieved high performance, with an accuracy of 0.836, precision of 0.850, recall of 0.904, and an F1-score of 0.875. Models without TTA showed a significant drop in these metrics, emphasizing TTA's importance in improving classification performance. This study demonstrates that deep learning models can effectively distinguish CMV from severe UC in endoscopic images, paving the way for early, noninvasive diagnosis and improved patient care.