Molecular and cellular evolution of the primate dorsolateral prefrontal cortex

The granular dorsolateral prefrontal cortex (dlPFC) is an evolutionary specialization of primates that is centrally involved in cognition. We assessed more than 600,000 single-nucleus transcriptomes from adult human, chimpanzee, macaque, and marmoset dlPFC. Although most cell subtypes defined transc...

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Published inScience (American Association for the Advancement of Science) Vol. 377; no. 6614; p. eabo7257
Main Authors Ma, Shaojie, Skarica, Mario, Li, Qian, Xu, Chuan, Risgaard, Ryan D, Tebbenkamp, Andrew T N, Mato-Blanco, Xoel, Kovner, Rothem, Krsnik, Željka, de Martin, Xabier, Luria, Victor, Martí-Pérez, Xavier, Liang, Dan, Karger, Amir, Schmidt, Danielle K, Gomez-Sanchez, Zachary, Qi, Cai, Gobeske, Kevin T, Pochareddy, Sirisha, Debnath, Ashwin, Hottman, Cade J, Spurrier, Joshua, Teo, Leon, Boghdadi, Anthony G, Homman-Ludiye, Jihane, Ely, John J, Daadi, Etienne W, Mi, Da, Daadi, Marcel, Marín, Oscar, Hof, Patrick R, Rasin, Mladen-Roko, Bourne, James, Sherwood, Chet C, Santpere, Gabriel, Girgenti, Matthew J, Strittmatter, Stephen M, Sousa, André M M, Sestan, Nenad
Format Journal Article
LanguageEnglish
Published United States The American Association for the Advancement of Science 30.09.2022
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Summary:The granular dorsolateral prefrontal cortex (dlPFC) is an evolutionary specialization of primates that is centrally involved in cognition. We assessed more than 600,000 single-nucleus transcriptomes from adult human, chimpanzee, macaque, and marmoset dlPFC. Although most cell subtypes defined transcriptomically are conserved, we detected several that exist only in a subset of species as well as substantial species-specific molecular differences across homologous neuronal, glial, and non-neural subtypes. The latter are exemplified by human-specific switching between expression of the neuropeptide somatostatin and tyrosine hydroxylase, the rate-limiting enzyme in dopamine production in certain interneurons. The above molecular differences are also illustrated by expression of the neuropsychiatric risk gene , which is human-specific in microglia and primate-specific in layer 4 granular neurons. We generated a comprehensive survey of the dlPFC cellular repertoire and its shared and divergent features in anthropoid primates.
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These authors contributed equally to this work
Author contributions: S.M., M.S., A.M.M.S., and N.S. conceived and designed the study. M.S., A.M.M.S., L.T., A.G.B., J.H.-L., M.D., J.B., P.R.H., C.C.S., N.S. collected and processed the tissue specimens and dissected the samples for analyses. M.S. performed the snRNA-seq and sn-multiome experiments. S.M., Q.L., and C.X. analyzed the snRNA-seq data. S.M. and D.L. analyzed the sn-multiome data. R.D.R., D.K.S., Z.G.-S., A.D., and C.J.H performed RNA in situ hybridization validating species-specific subtypes. Z.K., M.R., A.T.N.T., R.K., R.D.R., Z.G.-S., A.D. and C.Q. conducted FOXP2 immunohistochemistry and in situ hybridization. A.T.N.T generated the mouse in utero electroporation RNA-seq data and S.M. and Q.L. analyzed the data. X. M.-B., S.M., X.D.M., X. M.-P. and G.S. performed additional FOXP2 analysis. R.D.R., D.K.S., A.D., and A.M.M.S. conducted SST and TH experiments. V.L., A.K., and S.M. analyzed SST sequence evolution. S.M., M.S., A.M.M.S., Q.L., C.X., R.K., D.K.S., Z.G.-S., K.T.G., S.P., J.S., L.T., A.G.B., J.H.-L., J.J.E., E.W.D., D.M., M.D., O.M., P.R.H., J.B., C.C.S., G.S., M.J.G., and S.M.S. contributed to additional data collection and interpretation. S.M., M.S., A.M.M.S., and N.S. wrote the manuscript. All authors edited the manuscript.
ISSN:0036-8075
1095-9203
1095-9203
DOI:10.1126/science.abo7257