De Novo Assembly of a Sarcocarp Transcriptome Set Identifies AaMYB1 as a Regulator of Anthocyanin Biosynthesis in Actinidia arguta var. purpurea

• Published in: International journal of molecular sciences Vol. 23; no. 20; p. 12120
• Main Authors: Niu, Bei, Li, Qiaohong, Fan, Lijuan, Shi, Xiaodong, Liu, Yuan, Zhuang, Qiguo, Qin, Xiaobo
• Format: Journal Article
• Language: English
• Published: Basel MDPI AG 11.10.2022; MDPI
• Subjects: Actinidia; Actinidia arguta; Actinidia arguta var. purpurea; Ammonia; anthocyanin; Anthocyanins; Biosynthesis; Carbohydrates; Chalcone synthase; Correlation analysis; Enzymes; Flavonoids; Fruits; Gene expression; Genes; Kiwifruit; Metabolism; Metabolites; Molecular modelling; MYB transcription factor; Phenylalanine; Phenylalanine ammonia-lyase; regulation; Seeds; Signal transduction; Transcription factors; transcriptome; Transcriptomes; Transcriptomics
• ISSN: 1422-0067; 1661-6596; 1422-0067
• DOI: 10.3390/ijms232012120

The kiwifruit (Actinidia arguta var. purpurea) produces oval shaped fruits containing a slightly green or mauve outer exocarp and a purple-flesh endocarp with rows of tiny black seeds. The flesh color of the fruit results from a range of anthocyanin compounds, and is an important trait for kiwifruit consumers. To elucidate the molecular mechanisms involved in anthocyanin biosynthesis of the sarcocarp during A. arguta fruit development, de novo assembly and transcriptomic profile analyses were performed. Based on significant Gene Ontology (GO) biological terms, differentially expressed genes were identified in flavonoid biosynthetic and metabolic processes, pigment biosynthesis, carbohydrate metabolic processes, and amino acid metabolic processes. The genes closely related to anthocyanin biosynthesis, such as phenylalanine ammonia-lyase (PAL), chalcone synthase (CHS), and anthocyanidin synthase (ANS), displayed significant up-regulation during fruit development according to the transcriptomic data, which was further confirmed by qRT-PCR. Meanwhile, a series of transcription factor genes were identified among the DEGs. Through a correlation analysis. AaMYB1 was found to be significantly correlated with key genes of anthocyanin biosynthesis, especially with CHS. Through a transient expression assay, AaMYB1 induced anthocyanin accumulation in tobacco leaves. These data provide an important basis for exploring the related mechanisms of sarcocarp anthocyanin biosynthesis in A. arguta. This study will provide a strong foundation for functional studies on A. arguta and will facilitate improved breeding of A. arguta fruit.