Spectrum of mutations in Lebanese patients with phenylalanine hydroxylase deficiency

• Published in: Gene Vol. 515; no. 1; pp. 117 - 122
• Main Authors: Karam, Pascale E., Alhamra, Rasha Shahabeddeen, Nemer, Georges, Usta, Julnar
• Format: Journal Article
• Language: English
• Published: Netherlands Elsevier B.V 15.02.2013
• Subjects: Age; Alleles; Child, Preschool; Consanguinity; Ethnic groups; Exons; Female; genes; Genetic Association Studies; genetic heterogeneity; Genotypes; Genotype–phenotype; homozygosity; Homozygote; Humans; Inborn errors of metabolism; Infant; Infant, Newborn; Lebanon; Male; Muslims; Mutation; Neonates; Nonsense mutation; paH gene; patients; phenotype; Phenylalanine; Phenylalanine 4-monooxygenase; Phenylalanine Hydroxylase - deficiency; Phenylalanine Hydroxylase - genetics; Phenylketonuria; Phenylketonurias - genetics; Pilot Projects; PKU; Polymorphism, Genetic; screening; Lebanon; Mediterranean region; Lebanon; MHP; Phenylalanine; Genotype–phenotype; AV; PAH; IVS; HR; PKU; Phe; PRA; BH4
• ISSN: 0378-1119; 1879-0038
• DOI: 10.1016/j.gene.2012.11.018

Phenylketonuria is an autosomal recessive inborn error of metabolism resulting from phenylalanine hydroxylase deficiency. Genetic basis of phenylalanine hydroxylase deficiency has been reported in various European and Asian countries with few reports available in Arab populations of the Mediterranean region. This is the first pilot study describing phenotype and genotype of 23 Lebanese patients with phenylketonuria. 48% of the patients presented mainly with neurological signs at a mean age of 2years 9months, as newborn screening is not yet a nationwide policy. 56.5% of the patients had classical phenylketonuria. Thirteen different mutations were identified: splice site 52%, frameshift 31%, and missense 17% with no nonsense mutations. IVS10-11G>A was found mainly in Christians at high relative frequency whereas Muslims carried the G352fs and R261Q mutations. A rare splice mutation IVS7+1G>T, not described before, was identified in the homozygous state in one family with moderate phenylketonuria phenotype. Genotype–phenotype correlation using Guldberg arbitrary value method showed high consistency between predicted and observed phenotypes. Calculated homozygosity rate was 0.07 indicating the genetic heterogeneity in our patients. Our findings underline the admixture of different ethnicities and religions in Lebanon that might help tracing back the PAH gene flux history across the Mediterranean region. ► We screen 23 Lebanese patients for mutations in the phenylalanine hydroxylase gene. ► High heterogeneity rate and high genotype–phenotype consistency are found. ► We describe unreported homozygous IVS7+1G>T mutation with a moderate phenotype. ► Our findings might help tracing back gene flux history across Mediterranean region.