SEQEL: a tool for biological sequence manipulation in Emacs

Summary Sequences are arguably the most common biological data. An easy-to-use tool can greatly facilitate daily manipulation and analysis of biological sequences. Here, we present SEQEL, a tool providing a convenient environment for editing, formatting and rendering of DNA, RNA and protein sequence...

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Bibliographic Details
Published inBioinformatics Advances Vol. 1; no. 1; p. vbab019
Main Authors Xu, Zhenjiang Zech, Lu, Hui
Format Journal Article
LanguageEnglish
Published England Oxford University Press 2021
Subjects
Application Note
Nucleotide sequence
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Summary:Summary Sequences are arguably the most common biological data. An easy-to-use tool can greatly facilitate daily manipulation and analysis of biological sequences. Here, we present SEQEL, a tool providing a convenient environment for editing, formatting and rendering of DNA, RNA and protein sequences. This is accomplished by extending the commonly used text editor, Emacs, which is available for Windows, Linux and Mac OS. Availability and Implementation The unit tested ELISP source code for seqel is freely available from https://github.com/rnaer/seqel along with documentation. Contact zhenjiang.xu@gmail.com
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The authors wish it to be known that, in their opinion, the first two authors should be regarded as Joint Authors.
ISSN:1367-4803
2635-0041
2635-0041
DOI:10.1093/bioadv/vbab019