Bacteroides luti sp. nov., an anaerobic, cellulolytic and xylanolytic bacterium isolated from methanogenic sludge
A mesophilic, anaerobic, cellulolytic and xylanolytic strain, UasXn-3T, was isolated from anaerobic granular sludge in a mesophilic upflow anaerobic sludge blanket reactor, which was used to treat municipal sewage. The cells were Gram-stain-negative, non-motile, and non-spore-forming rods. The optim...
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Published in | International journal of systematic and evolutionary microbiology Vol. 64; no. Pt 5; pp. 1770 - 1774 |
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Format | Journal Article |
Language | English |
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01.05.2014
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Abstract | A mesophilic, anaerobic, cellulolytic and xylanolytic strain, UasXn-3T, was isolated from anaerobic granular sludge in a mesophilic upflow anaerobic sludge blanket reactor, which was used to treat municipal sewage. The cells were Gram-stain-negative, non-motile, and non-spore-forming rods. The optimal temperature for growth was 37-40 °C and the optimal pH for growth was pH 6.5-7.0. Strain UasXn-3T could grow on several polysaccharides and sugars, including cellulose, cellobiose, xylan, xylose, glucose, fructose, arabinose, mannose, raffinose, trehalose and starch. The DNA G+C content was 44.4 mol%. On the basis of comparative 16S rRNA gene sequence analysis, strain UasXn-3T was identified as a member of the genus Bacteroides and most closely related to Bacteroides oleiciplenus, B. intestinalis, B. cellulosilyticus and B. graminisolvens (sequence similarities of 91.3-91.6%). Since the genetic and phenotypic properties suggest that strain UasXn-3T represents a novel species, we propose the name Bacteroides luti sp. nov. The type strain is UasXn-3T (=JCM 19020T=DSM 26991T). |
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AbstractList | A mesophilic, anaerobic, cellulolytic and xylanolytic strain, UasXn-3
T
, was isolated from anaerobic granular sludge in a mesophilic upflow anaerobic sludge blanket reactor, which was used to treat municipal sewage. The cells were Gram-stain-negative, non-motile, and non-spore-forming rods. The optimal temperature for growth was 37–40 °C and the optimal pH for growth was pH 6.5–7.0. Strain UasXn-3
T
could grow on several polysaccharides and sugars, including cellulose, cellobiose, xylan, xylose, glucose, fructose, arabinose, mannose, raffinose, trehalose and starch. The DNA G+C content was 44.4 mol%. On the basis of comparative 16S rRNA gene sequence analysis, strain UasXn-3
T
was identified as a member of the genus
Bacteroides
and most closely related to
Bacteroides oleiciplenus
,
B. intestinalis
,
B. cellulosilyticus
and
B. graminisolvens
(sequence similarities of 91.3–91.6 %). Since the genetic and phenotypic properties suggest that strain UasXn-3
T
represents a novel species, we propose the name
Bacteroides luti
sp. nov. The type strain is UasXn-3
T
( = JCM 19020
T
= DSM 26991
T
). A mesophilic, anaerobic, cellulolytic and xylanolytic strain, UasXn-3T, was isolated from anaerobic granular sludge in a mesophilic upflow anaerobic sludge blanket reactor, which was used to treat municipal sewage. The cells were Gram-stain-negative, non-motile, and non-spore-forming rods. The optimal temperature for growth was 37-40 °C and the optimal pH for growth was pH 6.5-7.0. Strain UasXn-3T could grow on several polysaccharides and sugars, including cellulose, cellobiose, xylan, xylose, glucose, fructose, arabinose, mannose, raffinose, trehalose and starch. The DNA G+C content was 44.4 mol%. On the basis of comparative 16S rRNA gene sequence analysis, strain UasXn-3T was identified as a member of the genus Bacteroides and most closely related to Bacteroides oleiciplenus, B. intestinalis, B. cellulosilyticus and B. graminisolvens (sequence similarities of 91.3-91.6%). Since the genetic and phenotypic properties suggest that strain UasXn-3T represents a novel species, we propose the name Bacteroides luti sp. nov. The type strain is UasXn-3T (=JCM 19020T=DSM 26991T). |
Author | Hatamoto, Masashi Kaneshige, Masami Yamaguchi, Takashi Nakamura, Akinobu |
Author_xml | – sequence: 1 givenname: Masashi surname: Hatamoto fullname: Hatamoto, Masashi organization: Department of Environmental Systems Engineering, Nagaoka University of Technology, Nagaoka, Niigata 940-2188, Japan – sequence: 2 givenname: Masami surname: Kaneshige fullname: Kaneshige, Masami organization: Department of Environmental Systems Engineering, Nagaoka University of Technology, Nagaoka, Niigata 940-2188, Japan – sequence: 3 givenname: Akinobu surname: Nakamura fullname: Nakamura, Akinobu organization: Department of Environmental Systems Engineering, Nagaoka University of Technology, Nagaoka, Niigata 940-2188, Japan – sequence: 4 givenname: Takashi surname: Yamaguchi fullname: Yamaguchi, Takashi organization: Department of Environmental Systems Engineering, Nagaoka University of Technology, Nagaoka, Niigata 940-2188, Japan |
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References | Foresti (r5) 2002; 45 Sakamoto (r15) 2010; 60 Robert (r13) 2007; 57 Syutsubo (r17) 2011; 64 Chouari (r4) 2005; 7 Hungate (r9) 1969; 3B Watanabe (r22) 2010; 60 Sakamoto (r14) 2011; 157 Takahashi (r18) 2011; 5 Qiu (r12) 2004; 70 Ueki (r21) 2011; 61 Tamura (r19) 2011; 28 Hatamoto (r8) 2007c; 73 Bibby (r3) 2010; 44 Khan (r10) 2011; 55 Song (r16) 2011; vol. 4 Akasaka (r1) 2003; 43 Bakir (r2) 2006; 56 Hatamoto (r7) 2007b; 57 Ueki (r20) 2008; 58 Nishiyama (r11) 2009; 59 Hatamoto (r6) 2007a; 73 |
References_xml | – volume: 5 start-page: 821 year: 2011 ident: r18 article-title: Evaluation of treatment characteristics and sludge properties in a UASB reactor treating municipal sewage at ambient temperature publication-title: Int J Environ Res contributor: fullname: Takahashi – volume: 61 start-page: 448 year: 2011 ident: r21 article-title: Bacteroides paurosaccharolyticus sp. nov., isolated from a methanogenic reactor treating waste from cattle farms publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.022566-0 contributor: fullname: Ueki – volume: 70 start-page: 1617 year: 2004 ident: r12 article-title: Identification and isolation of anaerobic, syntrophic phthalate isomer-degrading microbes from methanogenic sludges treating wastewater from terephthalate manufacturing publication-title: Appl Environ Microbiol doi: 10.1128/AEM.70.3.1617-1626.2004 contributor: fullname: Qiu – volume: 57 start-page: 1516 year: 2007 ident: r13 article-title: Bacteroides cellulosilyticus sp. nov., a cellulolytic bacterium from the human gut microbial community publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.64998-0 contributor: fullname: Robert – volume: 73 start-page: 4119 year: 2007c ident: r8 article-title: Diversity of anaerobic microorganisms involved in long-chain fatty acid degradation in methanogenic sludges as revealed by RNA-based stable isotope probing publication-title: Appl Environ Microbiol doi: 10.1128/AEM.00362-07 contributor: fullname: Hatamoto – volume: 3B start-page: 117 year: 1969 ident: r9 article-title: A roll tube method for cultivation of strick anaerobes publication-title: Methods Microbiol doi: 10.1016/S0580-9517(08)70503-8 contributor: fullname: Hungate – volume: 64 start-page: 1959 year: 2011 ident: r17 article-title: Evaluation of sludge properties in a pilot-scale UASB reactor for sewage treatment in a temperate region publication-title: Water Sci Technol doi: 10.2166/wst.2011.762 contributor: fullname: Syutsubo – volume: 60 start-page: 1864 year: 2010 ident: r22 article-title: Bacteroides clarus sp. nov., Bacteroides fluxus sp. nov. and Bacteroides oleiciplenus sp. nov., isolated from human faeces publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.015107-0 contributor: fullname: Watanabe – volume: 60 start-page: 2984 year: 2010 ident: r15 article-title: hsp60 and 16S rRNA gene sequence relationships among species of the genus Bacteroides with the finding that Bacteroides suis and Bacteroides tectus are heterotypic synonyms of Bacteroides pyogenes publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.021154-0 contributor: fullname: Sakamoto – volume: vol. 4 start-page: 27 volume-title: Bergey’s Manual of Systematic Bacteriology year: 2011 ident: r16 article-title: Genus I. Bacteroides contributor: fullname: Song – volume: 45 start-page: 181 year: 2002 ident: r5 article-title: Anaerobic treatment of domestic sewage: established technologies and perspectives publication-title: Water Sci Technol doi: 10.2166/wst.2002.0324 contributor: fullname: Foresti – volume: 58 start-page: 346 year: 2008 ident: r20 article-title: Bacteroides propionicifaciens sp. nov., isolated from rice-straw residue in a methanogenic reactor treating waste from cattle farms publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.65486-0 contributor: fullname: Ueki – volume: 43 start-page: 149 year: 2003 ident: r1 article-title: Phylogeny of numerically abundant culturable anaerobic bacteria associated with degradation of rice plant residue in Japanese paddy field soil publication-title: FEMS Microbiol Ecol doi: 10.1111/j.1574-6941.2003.tb01054.x contributor: fullname: Akasaka – volume: 56 start-page: 151 year: 2006 ident: r2 article-title: Bacteroides intestinalis sp. nov., isolated from human faeces publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.63914-0 contributor: fullname: Bakir – volume: 44 start-page: 4252 year: 2010 ident: r3 article-title: Pyrosequencing of the 16S rRNA gene to reveal bacterial pathogen diversity in biosolids publication-title: Water Res doi: 10.1016/j.watres.2010.05.039 contributor: fullname: Bibby – volume: 57 start-page: 2137 year: 2007b ident: r7 article-title: Syntrophomonas palmitatica sp. nov., an anaerobic, syntrophic, long-chain fatty-acid-oxidizing bacterium isolated from methanogenic sludge publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.64981-0 contributor: fullname: Hatamoto – volume: 157 start-page: 3388 year: 2011 ident: r14 article-title: Identification and classification of the genus Bacteroides by multilocus sequence analysis publication-title: Microbiology doi: 10.1099/mic.0.052332-0 contributor: fullname: Sakamoto – volume: 28 start-page: 2731 year: 2011 ident: r19 article-title: mega5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods publication-title: Mol Biol Evol doi: 10.1093/molbev/msr121 contributor: fullname: Tamura – volume: 59 start-page: 1901 year: 2009 ident: r11 article-title: Bacteroides graminisolvens sp. nov., a xylanolytic anaerobe isolated from a methanogenic reactor treating cattle waste publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.008268-0 contributor: fullname: Nishiyama – volume: 7 start-page: 1104 year: 2005 ident: r4 article-title: Novel predominant archaeal and bacterial groups revealed by molecular analysis of an anaerobic sludge digester publication-title: Environ Microbiol doi: 10.1111/j.1462-2920.2005.00795.x contributor: fullname: Chouari – volume: 73 start-page: 1332 year: 2007a ident: r6 article-title: Identification and cultivation of anaerobic, syntrophic long-chain fatty acid-degrading microbes from mesophilic and thermophilic methanogenic sludges publication-title: Appl Environ Microbiol doi: 10.1128/AEM.02053-06 contributor: fullname: Hatamoto – volume: 55 start-page: 1232 year: 2011 ident: r10 article-title: Sustainable options of post treatment of UASB effluent treating sewage: A review publication-title: Resour Conserv Recycling doi: 10.1016/j.resconrec.2011.05.017 contributor: fullname: Khan |
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Snippet | A mesophilic, anaerobic, cellulolytic and xylanolytic strain, UasXn-3T, was isolated from anaerobic granular sludge in a mesophilic upflow anaerobic sludge... A mesophilic, anaerobic, cellulolytic and xylanolytic strain, UasXn-3 T , was isolated from anaerobic granular sludge in a mesophilic upflow anaerobic sludge... |
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SubjectTerms | Bacterial Typing Techniques Bacteroides - classification Bacteroides - genetics Bacteroides - isolation & purification Base Composition DNA, Bacterial - genetics Fatty Acids - chemistry Japan Methane - metabolism Molecular Sequence Data Phylogeny RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Sewage - microbiology |
Title | Bacteroides luti sp. nov., an anaerobic, cellulolytic and xylanolytic bacterium isolated from methanogenic sludge |
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