Plasmid diversity among genetically related Klebsiella pneumoniae blaKPC-2 and blaKPC-3 isolates collected in the Dutch national surveillance
Carbapenemase-producing Klebsiella pneumoniae emerged as a nosocomial pathogen causing morbidity and mortality in patients. For infection prevention it is important to track the spread of K. pneumoniae and its plasmids between patients. Therefore, the major aim was to recapitulate the contents and d...
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Published in | Scientific reports Vol. 10; no. 1; p. 16778 |
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Main Authors | , , , , , , , |
Format | Journal Article |
Language | English |
Published |
London
Nature Publishing Group UK
08.10.2020
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Subjects | |
Online Access | Get full text |
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Summary: | Carbapenemase-producing
Klebsiella pneumoniae
emerged as a nosocomial pathogen causing morbidity and mortality in patients. For infection prevention it is important to track the spread of
K. pneumoniae
and its plasmids between patients. Therefore, the major aim was to recapitulate the contents and diversity of the plasmids of genetically related
K. pneumoniae
strains harboring the beta-lactamase gene
bla
KPC-2
or
bla
KPC-3
to determine their dissemination in the Netherlands and the former Dutch Caribbean islands from 2014 to 2019. Next-generation sequencing was combined with long-read third-generation sequencing to reconstruct 22 plasmids. wgMLST revealed five genetic clusters comprised of
K. pneumoniae bla
KPC-2
isolates and four clusters consisted of
bla
KPC-3
isolates. KpnCluster-019
bla
KPC-2
isolates were found both in the Netherlands and the Caribbean islands, while
bla
KPC-3
cluster isolates only in the Netherlands. Each
K. pneumoniae bla
KPC-2
or
bla
KPC-3
cluster was characterized by a distinct resistome and plasmidome. However, the large and medium plasmids contained a variety of antibiotic resistance genes, conjugation machinery, cation transport systems, transposons, toxin/antitoxins, insertion sequences and prophage-related elements. The small plasmids carried genes implicated in virulence. Thus, implementing long-read plasmid sequencing analysis for
K. pneumoniae
surveillance provided important insights in the transmission of a KpnCluster-019
bla
KPC-2
strain between the Netherlands and the Caribbean. |
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Bibliography: | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
ISSN: | 2045-2322 2045-2322 |
DOI: | 10.1038/s41598-020-73440-2 |