X-ray crystallographic characterization and phasing of a fucose-specific lectin from Aleuria aurantia
A fucose‐specific lectin from Aleuria aurantia was crystallized in its native form and was also cocrystallized with HgCl2. Crystallization was performed using the sitting‐drop vapour‐diffusion method with ammonium sulfate as a precipitant. Both the Hg‐free native crystals and the Hg cocrystals belon...
Saved in:
Published in | Acta crystallographica. Section D, Biological crystallography. Vol. 59; no. 2; pp. 378 - 380 |
---|---|
Main Authors | , , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
5 Abbey Square, Chester, Cheshire CH1 2HU, England
Munksgaard International Publishers
01.02.2003
|
Subjects | |
Online Access | Get full text |
Cover
Loading…
Abstract | A fucose‐specific lectin from Aleuria aurantia was crystallized in its native form and was also cocrystallized with HgCl2. Crystallization was performed using the sitting‐drop vapour‐diffusion method with ammonium sulfate as a precipitant. Both the Hg‐free native crystals and the Hg cocrystals belong to the hexagonal space group P6522. The unit‐cell parameters for the Hg‐free form are a = 84.0, c = 250.1 Å and for the Hg cocrystals are a = 83.9, c = 254.3 Å. Both forms of the crystals diffract X‐rays to 2.3 Å resolution and are suitable for high‐resolution crystal structure determination. Initial phasing was successfully performed by the MAD method using the Hg cocrystals and the electron density obtained was good enough for model building. |
---|---|
AbstractList | A fucose-specific lectin from Aleuria aurantia was crystallized in its native form and was also cocrystallized with HgCl(2). Crystallization was performed using the sitting-drop vapour-diffusion method with ammonium sulfate as a precipitant. Both the Hg-free native crystals and the Hg cocrystals belong to the hexagonal space group P6(5)22. The unit-cell parameters for the Hg-free form are a = 84.0, c = 250.1 A and for the Hg cocrystals are a = 83.9, c = 254.3 A. Both forms of the crystals diffract X-rays to 2.3 A resolution and are suitable for high-resolution crystal structure determination. Initial phasing was successfully performed by the MAD method using the Hg cocrystals and the electron density obtained was good enough for model building. A fucose‐specific lectin from Aleuria aurantia was crystallized in its native form and was also cocrystallized with HgCl2. Crystallization was performed using the sitting‐drop vapour‐diffusion method with ammonium sulfate as a precipitant. Both the Hg‐free native crystals and the Hg cocrystals belong to the hexagonal space group P6522. The unit‐cell parameters for the Hg‐free form are a = 84.0, c = 250.1 Å and for the Hg cocrystals are a = 83.9, c = 254.3 Å. Both forms of the crystals diffract X‐rays to 2.3 Å resolution and are suitable for high‐resolution crystal structure determination. Initial phasing was successfully performed by the MAD method using the Hg cocrystals and the electron density obtained was good enough for model building. |
Author | Ando, Akikazu Sugawara, Yoko Kita, Akiko Higuchi, Yoshiki Peapus, Diane H. Kamiya, Nobuo Nagata, Yoshiho Fujihashi, Masahiro Yamada, Tsuyoshi Nakajima, Eijiro Saito, Jun-ichi Miki, Kunio |
Author_xml | – sequence: 1 givenname: Masahiro surname: Fujihashi fullname: Fujihashi, Masahiro – sequence: 2 givenname: Diane H. surname: Peapus fullname: Peapus, Diane H. – sequence: 3 givenname: Eijiro surname: Nakajima fullname: Nakajima, Eijiro – sequence: 4 givenname: Tsuyoshi surname: Yamada fullname: Yamada, Tsuyoshi – sequence: 5 givenname: Jun-ichi surname: Saito fullname: Saito, Jun-ichi – sequence: 6 givenname: Akiko surname: Kita fullname: Kita, Akiko – sequence: 7 givenname: Yoshiki surname: Higuchi fullname: Higuchi, Yoshiki – sequence: 8 givenname: Yoko surname: Sugawara fullname: Sugawara, Yoko – sequence: 9 givenname: Akikazu surname: Ando fullname: Ando, Akikazu – sequence: 10 givenname: Nobuo surname: Kamiya fullname: Kamiya, Nobuo – sequence: 11 givenname: Yoshiho surname: Nagata fullname: Nagata, Yoshiho – sequence: 12 givenname: Kunio surname: Miki fullname: Miki, Kunio |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/12554959$$D View this record in MEDLINE/PubMed |
BookMark | eNqFkEtv1DAUhS1URB_wA9ggr9gF_Izj5ajAgDQqSC1Q2Fh3nJuOIRMHOxEMvx5XM4JKXbC6R7rfdxbnlBwNcUBCnnL2gnNmXl4yy4xSyjLBhOBGPyAnXFpbMabM0Z18TE5z_sZYoaR5RI650FpZbU8IXlcJdtSnXZ6g7-NNgnETPPUbSOAnTOE3TCEOFIaWjhvIYbihsaNAu9nHjFUe0YeuGD36KQy0S3FLFz3OKQCFOcEwBXhMHnbQZ3xyuGfk45vXV-dvq9X75bvzxaryslGyUq2ARlloda0ECDDodatsrVAjgK99IzWWdytaBW2jRAdc2MaYer3u6rqTZ-T5vndM8ceMeXLbkD32PQwY5-xMoZVqbAH5HvQp5pywc2MKW0g7x5m73dbd27Y4zw7l83qL7T_jMGYBmj3wM_S4-3-jW3x5dXXJuJZFrfZqyBP--qtC-u5qIwv6-WLp1PLDV_bJrty1_AN0RZcV |
CitedBy_id | crossref_primary_10_1128_AEM_02051_18 crossref_primary_10_3109_07388550903365048 crossref_primary_10_1016_j_bbrc_2011_09_027 crossref_primary_10_1016_j_bbagen_2006_01_015 crossref_primary_10_1371_journal_pone_0189375 crossref_primary_10_1002_pmic_201600064 crossref_primary_10_1002_chem_202000593 crossref_primary_10_1074_jbc_M302642200 |
ContentType | Journal Article |
DBID | BSCLL CGR CUY CVF ECM EIF NPM AAYXX CITATION 7X8 |
DOI | 10.1107/S0907444902022175 |
DatabaseName | Istex Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed CrossRef MEDLINE - Academic |
DatabaseTitle | MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) CrossRef MEDLINE - Academic |
DatabaseTitleList | MEDLINE MEDLINE - Academic |
Database_xml | – sequence: 1 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Engineering Anatomy & Physiology Chemistry |
EISSN | 1399-0047 |
EndPage | 380 |
ExternalDocumentID | 10_1107_S0907444902022175 12554959 AYDTS0153 ark_67375_WNG_4GPZ0V9L_X |
Genre | article Research Support, Non-U.S. Gov't Journal Article |
GroupedDBID | --- -ET -~X .3N .GA .Y3 05W 0R~ 10A 186 1OB 1OC 1Y6 23M 2WC 31~ 33P 36B 3SF 4.4 50Y 50Z 51W 51X 52M 52N 52O 52P 52S 52T 52U 52W 52X 53G 5GY 5HH 5LA 66C 6J9 6TJ 702 7PT 8-0 8-1 8-3 8-4 8-5 8UM 8WZ 930 A03 A6W AAESR AAEVG AAHHS AANLZ AAONW AASGY AAXRX AAZKR ABCQN ABCUV ABDBF ABEML ABJNI ABPVW ACAHQ ACBWZ ACCFJ ACCZN ACGFO ACGFS ACNCT ACPOU ACXBN ACXQS ADBBV ADEOM ADIYS ADIZJ ADMGS ADOZA ADZOD AEEZP AEIGN AEIMD AEQDE AEUQT AEUYR AFBPY AFEBI AFFPM AFGKR AFPWT AFZJQ AHBTC AI. AITYG AIURR AIWBW AJBDE AJXKR ALAGY ALMA_UNASSIGNED_HOLDINGS ALUQN AMBMR AMYDB ASPBG ATUGU AUFTA AVWKF AZBYB AZFZN AZVAB BAFTC BDRZF BHBCM BMNLL BNHUX BROTX BRXPI BSCLL BTSUX BY8 CAG COF CS3 D-E D-F DCZOG DPXWK DR2 DRFUL DRSTM EAD EAP EBC EBD EBS EJD EMB EMK EMOBN EST ESX F00 F01 F04 F5P FEDTE G-S G.N GODZA GX1 H.T H.X HF~ HGLYW HH5 HVGLF HZI HZ~ I-F IHE IX1 J0M K48 LATKE LC2 LC3 LEEKS LH4 LITHE LOXES LP6 LP7 LUTES LW6 LYRES MK4 MRFUL MRSTM MSFUL MSSTM MVM MXFUL MXSTM N04 N05 N9A NEJ NF~ O66 P2P P2W P2X P4D PALCI Q.N Q11 QB0 R.K RCJ RIWAO RJQFR RNS ROL RX1 SJN SUPJJ SV3 TN5 TUS UB1 UPT V2E V8K VH1 W8V W99 WBFHL WBKPD WIH WIK WOHZO WQJ WRC WYISQ XG1 ZCG ZZTAW ~02 ~IA ~WT CGR CUY CVF ECM EIF NPM AAYXX CITATION 7X8 |
ID | FETCH-LOGICAL-c3843-4d2a849ad5642a2a7ec5d4964e5eaac6c835e9add2d4ad842fa1298776bbf66f3 |
IEDL.DBID | DR2 |
ISSN | 1399-0047 0907-4449 |
IngestDate | Sat Aug 17 00:57:11 EDT 2024 Fri Aug 23 03:10:23 EDT 2024 Sat Sep 28 08:37:38 EDT 2024 Sat Aug 24 01:02:09 EDT 2024 Wed Oct 30 09:53:39 EDT 2024 |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 2 |
Language | English |
LinkModel | DirectLink |
MergedId | FETCHMERGED-LOGICAL-c3843-4d2a849ad5642a2a7ec5d4964e5eaac6c835e9add2d4ad842fa1298776bbf66f3 |
Notes | ArticleID:AYDTS0153 ark:/67375/WNG-4GPZ0V9L-X istex:6E1068DB84D04107BF747E74C24A28A6533ED36F ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
PMID | 12554959 |
PQID | 72984489 |
PQPubID | 23479 |
PageCount | 3 |
ParticipantIDs | proquest_miscellaneous_72984489 crossref_primary_10_1107_S0907444902022175 pubmed_primary_12554959 wiley_primary_10_1107_S0907444902022175_AYDTS0153 istex_primary_ark_67375_WNG_4GPZ0V9L_X |
PublicationCentury | 2000 |
PublicationDate | 2003-02 February 2003 2003-Feb 2003-02-01 20030201 |
PublicationDateYYYYMMDD | 2003-02-01 |
PublicationDate_xml | – month: 02 year: 2003 text: 2003-02 |
PublicationDecade | 2000 |
PublicationPlace | 5 Abbey Square, Chester, Cheshire CH1 2HU, England |
PublicationPlace_xml | – name: 5 Abbey Square, Chester, Cheshire CH1 2HU, England – name: United States |
PublicationTitle | Acta crystallographica. Section D, Biological crystallography. |
PublicationTitleAlternate | Acta Cryst. D |
PublicationYear | 2003 |
Publisher | Munksgaard International Publishers |
Publisher_xml | – name: Munksgaard International Publishers |
SSID | ssj0002237 |
Score | 1.7822994 |
Snippet | A fucose‐specific lectin from Aleuria aurantia was crystallized in its native form and was also cocrystallized with HgCl2. Crystallization was performed using... A fucose-specific lectin from Aleuria aurantia was crystallized in its native form and was also cocrystallized with HgCl(2). Crystallization was performed... |
SourceID | proquest crossref pubmed wiley istex |
SourceType | Aggregation Database Index Database Publisher |
StartPage | 378 |
SubjectTerms | Ascomycota - chemistry Crystallization - methods Crystallography, X-Ray - methods fucose-specific lectins Fungal Proteins - chemistry Lectins - chemistry Mercuric Chloride - chemistry Static Electricity |
Title | X-ray crystallographic characterization and phasing of a fucose-specific lectin from Aleuria aurantia |
URI | https://api.istex.fr/ark:/67375/WNG-4GPZ0V9L-X/fulltext.pdf https://onlinelibrary.wiley.com/doi/abs/10.1107%2FS0907444902022175 https://www.ncbi.nlm.nih.gov/pubmed/12554959 https://search.proquest.com/docview/72984489 |
Volume | 59 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwpV1Pb9MwFH-axmFwgK2DUdiGD2gHpIw2cWL7WHVs0wQTgg0KF-vFdkS1kU6lkSgnPgKfkU_Cs5N0G0NCgkukyLHj_-_38_tjgKeOO0IB0kSGhEPEJT3yxL8qxftIElFZTxRfHWeHp_xolI6WYNj6wtTxIRYHbn5lhP3aL3DMm1tIerWa0fM6zhUBnpiAtXc07yfCm3XtvbkMIUXiL1ywknhv-x4XjWaTynh-o4RrsumW7-avfwKe13FsEET798C2TajtT852q1m-a779Ft3xP9u4CncboMoG9cxagyVXdmB9UBJJ_zxnOyyYjoYz-Q6sDNtr4zpw50qEw3UYj35-_zHFOTPTOeHQ8yZC9tgws4gUXTuCMiwtu_iE_uyCTQqGrAjG9JTfe4N6iybmVQzjknmXGDY4dxUtHoYVSVvapu7D6f6Lk-Fh1NzuEJlE8iTiNkbJFdqUKBDGKJxJLVcZd6lDNJkhbOgo2caWo5U8LpCwiRQiy_Miy4rkASyXk9I9BGaMot7JJEGPlBNbkIWRInciEShzyW0XnrXjqi_qIB46kJ-e0De6uAs7YeQXX-L0zFu_iVS_Pz7Q_OD1x9479VKPuvCknRqa-tgrWrB0k-qL9lUg2qu6sFHPmMu_EoMjSkop_TDuf6-OHnzYO3lLoC159A95HsPtYH0YzMw3YXk2rdwWoahZvh2WyS_4mxCu |
link.rule.ids | 315,783,787,1378,27938,27939,46308,46732 |
linkProvider | Wiley-Blackwell |
linkToHtml | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwpV1LTxsxEB7xOACHPkKBtKX4UHGotDTZ9a7tY0SAtA1R1YY29GJ5ba-IgA1Ks1LTU38Cv5Ff0rE3G0qpVKm9rLTy2uvXeL7PnhkDvLTUIgrgOtCoHALK8ZFG7lUI2lSoEYVxRPG4l3RO6NtBPFiAduULU8aHmG-4Ocnw67UTcLchXUp5ozxndMSOUoGIJ0RkHS_CMop95O4xaH-4DSKFCtBfsRI5f_sGZbOzTSzk9b0i7minZdfR3_4EPe8iWa-KDh-CrRpRWqCc7xWTdE9__y2-4_-28hE8mGFV0ion12NYsHkN1ls58vTLKdkl3nrUb8vXYGW_ujmuBmu_BDlch-Hg5sf1WE2JHk8Ril7MgmQPNdHzYNGlLyhRuSFXZ8ptX5BRRhTJvD095ncOoc6oibhThmFOnFcMaV3YAuWHqAIVLq5UT-Dk8KC_3wlmFzwEOuI0CqgJFadCmRhZkAoVszo2VCTUxlYpnWiEhxaTTWioMpyGmUJ4whlL0jRLkizagKV8lNstIFoL7J2EI_qIKRIGnmnOUssipnjKqanDq2pg5VUZx0N6_tNg8l4X12HXD_38SzU-dwZwLJafe0eSHr3_0vgkunJQh51qbkjsY3fWonI7Kr5KVwVkvqIOm-WUuf0rkjhkpZjS9AP_9-rI1mm7_xFxW_T0H_LswEqnf9yV3Te9d89g1Rsjeqvz57A0GRd2G0HVJH3hZeYn_8IUyA |
linkToPdf | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwpV1bb9MwFD4amwTjgUvHpdzmB7QHpIwsOUnsx6qlGzCqCTboeLEc29GqjbQqjUR54ifwG_klHDtNxxgSErxEihw7vh2f77PPOQZ4atESCuA60KQcAuT0yGP3KgTuKNKIwjii-GaQ7h3hq2EyXIFu4wtTx4dYbrg5yfDrtRPwiSlqIQ_rY0bH6xAFAZ6IgHVyBdYwjUNn19V7ex5DivSfv2Eldu72IWaLo00q5PmlIi4opzXXz1_-hDwvAlmvifo3wTRtqA1QTrerWb6tv_4W3vE_G3kLbiyQKuvUU-s2rNiyBRudklj6pznbYt521G_Kt-Bat7k3rgXXfwlxuAGj4Y9v36dqzvR0TkD0bBEie6SZXoaKrj1BmSoNm5wot3nBxgVTrPDW9JTfuYM6kybmzhhGJXM-MaxzZiuSHqYqUre0Tt2Bo_6Lw-5esLjeIdAxxzhAEymOQpmEOJCKVGZ1YlCkaBOrlE41gUNLySYyqAzHqFAETniWpXlepGkR34XVclza-8C0FtQ7KSfskSDRBV5onuU2izPFc46mDc-acZWTOoqH9OwnzOSlLm7Dlh_55ZdqeurM37JEfhjsStw9-Bi-F_ty2IbNZmpI6mN30qJKO64-S1cF4r2iDffqGXP-V6JwxEkpZceP-9-rIzvHvcN3hNriB_-QZxOuHvT6cv_l4PVDWPeWiN7k_BGszqaVfUyIapY_8RLzE6drE3c |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=X-ray+crystallographic+characterization+and+phasing+of+a+fucose-specific+lectin+from+Aleuria+aurantia&rft.jtitle=Acta+crystallographica.+Section+D%2C+Biological+crystallography.&rft.au=Fujihashi%2C+Masahiro&rft.au=Peapus%2C+Diane+H&rft.au=Nakajima%2C+Eijiro&rft.au=Yamada%2C+Tsuyoshi&rft.date=2003-02-01&rft.issn=0907-4449&rft.volume=59&rft.spage=378&rft.epage=380&rft_id=info:doi/10.1107%2FS0907444902022175&rft.externalDBID=NO_FULL_TEXT |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1399-0047&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1399-0047&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1399-0047&client=summon |