Pramel15 facilitates zygotic nuclear DNMT1 degradation and DNA demethylation

• Published in: Nature communications Vol. 15; no. 1; pp. 7310 - 17
• Main Authors: Tan, Jiajun, Li, Yingfeng, Li, Xiang, Zhu, Xiaoxiao, Liu, Liping, Huang, Hua, Wei, Jiahua, Wang, Hailing, Tian, Yong, Wang, Zhigao, Zhang, Zhuqiang, Zhu, Bing
• Format: Journal Article
• Language: English
• Published: London Nature Publishing Group UK 25.08.2024; Nature Publishing Group; Nature Portfolio
• Subjects: 13/1; 13/89; 14/19; 38/109; 38/23; 38/77; 49/23; 631/136/2435; 631/337/176/1988; 631/80/474/2085; 64/60; 82/58; 82/83; Animals; Cell Nucleus - metabolism; Cullin; Degradation; Demethylation; Deoxyribonucleic acid; Developmental stages; DNA; DNA (Cytosine-5-)-Methyltransferase 1 - genetics; DNA (Cytosine-5-)-Methyltransferase 1 - metabolism; DNA biosynthesis; DNA Demethylation; DNA Methylation; DNA methyltransferase; DNA Replication; DNMT1 protein; Embryo, Mammalian - metabolism; Embryogenesis; Embryonic Development - genetics; Embryonic growth stage; Embryos; Epigenetics; Female; Gene Expression Regulation, Developmental; Genetic screening; Humanities and Social Sciences; Male; Mice; Mice, Knockout; multidisciplinary; Nuclei (cytology); Proteasomes; Proteolysis; Science; Science (multidisciplinary); Stochasticity; Zygote - metabolism; Zygotes
• ISSN: 2041-1723; 2041-1723
• DOI: 10.1038/s41467-024-51614-0

In mammals, global passive demethylation contributes to epigenetic reprogramming during early embryonic development. At this stage, the majority of DNA-methyltransferase 1 (DNMT1) protein is excluded from nucleus, which is considered the primary cause. However, whether the remaining nuclear activity of DNMT1 is regulated by additional mechanisms is unclear. Here, we report that nuclear DNMT1 abundance is finetuned through proteasomal degradation in mouse zygotes. We identify a maternal factor, Pramel15, which targets DNMT1 for degradation via Cullin-RING E3 ligases. Loss of Pramel15 elevates DNMT1 levels in the zygote pronuclei, impairs zygotic DNA demethylation, and causes a stochastic gain of DNA methylation in early embryos. Thus, Pramel15 can modulate the residual level of DNMT1 in the nucleus during zygotic DNA replication, thereby ensuring efficient DNA methylation reprogramming in early embryos. Epigenetic reprogramming involves global loss of DNA methylation, but how this is regulated is not completely understood. Here, Tan et al. run a reverse genetic screen and report that nuclear DNMT1 is finetuned by maternal factor Pramel15 through proteasomal degradation in mouse zygotes.