Chromosome-level and haplotype-resolved genome assembly of Dracaena cambodiana (Asparagaceae)

• Published in: Scientific data Vol. 11; no. 1; pp. 873 - 9
• Main Authors: Chen, Bao-Zheng, Li, Da-Wei, Wang, Wei-Jia, Xin, Ya-Xuan, Wang, Wei-Bin, Li, Xu-Zhen, Hao, Ting-Ting, Dong, Yang, Yu, Wen-Bin
• Format: Journal Article
• Language: English
• Published: England Nature Publishing Group 13.08.2024; Nature Publishing Group UK; Nature Portfolio
• Subjects: Asparagaceae; Blood; China; Chromosomes, Plant - genetics; Data Descriptor; Dracaena - genetics; Dracaena cambodiana; Genome, Plant; Genomes; Genomics; Haplotypes; Ornamental plants; Plant Extracts; Protected species; China
• ISSN: 2052-4463; 2052-4463
• DOI: 10.1038/s41597-024-03670-w

Dracaena cambodiana Pierre ex Gagn. (Asparagaceae) is the source plant of Dragon's blood and has high ornamental values in gardening. Currently, this species is classified as the second-class state-protected species in the National Key Protected Wild Plants (NKPWP) of China. However, limited genomic data has hindered a more comprehensive scientific understanding of the processes involved in the production of Dragon's blood and the related conservation genomics research. In this study, we assembled a haplotype-resolved genome of D. cambodiana. The haploid genomes, haplotype A and haplotype B, are 1,015.22 Mb and 1,003.13 Mb in size, respectively. The completeness of haplotype A and haplotype B genomes was 98.60% and 98.20%, respectively, using the "embryophyta_10" dataset. Haplotype A and haplotype B genomes contained 27,361 and 27,066 protein-coding genes, respectively, with nearly all being functionally annotated. These findings provide new insights into the genomic characteristics of D. cambodiana and will offer additional genomic resources for studying the biosynthesis mechanism of Dragon's blood and the horticultural application of Dragon trees.