A review: Exploring the metabolic and structural characterisation of beta pleated amyloid fibril in human tissue using Raman spectrometry and SAXS

• Published in: Progress in biophysics and molecular biology Vol. 182; pp. 59 - 74
• Main Authors: Mohd Nor Ihsan, N.S., Abdul Sani, S.F., Looi, L.M., Cheah, P.L., Chiew, S.F., Pathmanathan, Dharini, Bradley, D.A.
• Format: Journal Article
• Language: English
• Published: England Elsevier Ltd 01.09.2023
• Subjects: Amyloid - chemistry; Amyloid beta-Peptides - chemistry; Amyloid fibril tissue; Amyloidosis - pathology; Humans; Metabolite database; Optical diagnostic; Proteomics; Raman spectroscopy; SAXS; Scattering, Small Angle; Spectrum Analysis, Raman - methods; X-Ray Diffraction; β-pleated amyloid; Metabolite database; Optical diagnostic; β-pleated amyloid; Amyloid fibril tissue; Raman spectroscopy; SAXS
• ISSN: 0079-6107; 1873-1732; 1873-1732
• DOI: 10.1016/j.pbiomolbio.2023.06.002

Amyloidosis is a deleterious condition caused by abnormal amyloid fibril build-up in living tissues. To date, 42 proteins that are linked to amyloid fibrils have been discovered. Amyloid fibril structure variation can affect the severity, progression rate, or clinical symptoms of amyloidosis. Since amyloid fibril build-up is the primary pathological basis for various neurodegenerative illnesses, characterization of these deadly proteins, particularly utilising optical techniques have been a focus. Spectroscopy techniques provide significant non-invasive platforms for the investigation of the structure and conformation of amyloid fibrils, offering a wide spectrum of analyses ranging from nanometric to micrometric size scales. Even though this area of study has been intensively explored, there still remain aspects of amyloid fibrillization that are not fully known, a matter hindering progress in treating and curing amyloidosis. This review aims to provide recent updates and comprehensive information on optical techniques for metabolic and proteomic characterization of β-pleated amyloid fibrils found in human tissue with thorough literature analysis of publications. Raman spectroscopy and SAXS are well established experimental methods for study of structural properties of biomaterials. With suitable models, they offer extended information for valid proteomic analysis under physiologically relevant conditions. This review points to evidence that despite limitations, these techniques are able to provide for the necessary output and proteomics indication in order to extrapolate the aetiology of amyloid fibrils for reliable diagnostic purposes. Our metabolic database may also contribute to elucidating the nature and function of the amyloid proteome in development and clearance of amyloid diseases.