Entomopathogen ID: a curated sequence resource for entomopathogenic fungi

• Published in: Antonie van Leeuwenhoek Vol. 111; no. 6; pp. 897 - 904
• Main Authors: Dunlap, Christopher A., Ramirez, José Luis, Mascarin, Gabriel Moura, Labeda, David P.
• Format: Journal Article
• Language: English
• Published: Cham Springer International Publishing 01.06.2018; Springer Nature B.V
• Subjects: Accessibility; Animals; Biomedical and Life Sciences; DNA, Fungal - genetics; Entomopathogenic fungi; Fungi; Hypocreales - classification; Hypocreales - genetics; Insecta - microbiology; Life Sciences; Loci; Medical Microbiology; Microbiology; Nucleotide sequence; Original Paper; Pathogens; Phylogeny; Plant Sciences; Soil Science & Conservation; MLSA; Beauveria; Metarhizium; Metacordyceps; Cordyceps; Isaria
• ISSN: 0003-6072; 1572-9699
• DOI: 10.1007/s10482-017-0988-2

We report the development of a publicly accessible, curated nucleotide sequence database of hypocrealean entomopathogenic fungi. The goal is to provide a platform for users to easily access sequence data from taxonomic reference strains. The database can be used to accurately identify unknown entomopathogenic fungi based on sequence data for a variety of phylogenetically informative loci. The database provides full multi-locus sequence alignment capabilities. The initial release contains data compiled for 525 strains covering the phylogenetic diversity of three important entomopathogenic families: Clavicipitaceae , Cordycipitaceae , and Ophiocordycipitaceae . Furthermore, Entomopathogen ID can be expanded to other fungal clades of insect pathogens, as sequence data becomes available. The database will allow isolate characterisation and evolutionary analyses. We contend that this freely available, web-accessible database will facilitate the broader community to accurately identify fungal entomopathogens, which will allow users to communicate research results more effectively.