The inefficacy of donepezil on glycated-AChE inhibition: Binding affinity, complex stability and mechanism

• Published in: International journal of biological macromolecules Vol. 160; pp. 35 - 46
• Main Authors: Yekta, Reza, Sadeghi, Leila, Dehghan, Gholamreza
• Format: Journal Article
• Language: English
• Published: Netherlands Elsevier B.V 01.10.2020
• Subjects: Acetylcholinesterase; Acetylcholinesterase - metabolism; Binding Sites; Catalytic Domain; Cholinesterase Inhibitors - therapeutic use; Donepezil; Donepezil - therapeutic use; Glucose - metabolism; Humans; Molecular dynamics simulation; Non-enzymatic glycation; Protein Conformation, alpha-Helical; Protein Domains; Non-enzymatic glycation; Molecular dynamics simulation; Acetylcholinesterase; Donepezil
• ISSN: 0141-8130; 1879-0003
• DOI: 10.1016/j.ijbiomac.2020.05.177

Donepezil (DPZ) is a well-known drug for Alzheimer's disease that inhibits acetylcholinesterase activity (AChE). In the present study, the inhibitory effect of DPZ on non-enzymatic glycated-AChE (GLY-AChE) was studied by different experimental and simulation techniques. The initial investigation revealed that glycation process could reduce AChE activity approximately 60% in the pure enzyme and 38% in the extracted crude AChE from neural cells cultured in the presence of high glucose (HG) concentration. It is suggested that glycation of lysine residues on the structure of AChE could change the conformation of the active site (Trp-86 and His-447) in a way that the orientation of acetylcholine interrupted. The further studies indicated that DPZ is although a strong inhibitor for the native enzyme, it is not able to affect the GLY-AChE activity. The KD values of AChE-DPZ and GLY-AChE-DPZ complexes were estimated to be 1.88 × 10−9 and 2.10 × 10−6, respectively. The stability assessment showed that AChE-DPZ complex is more stable than the glycated complex. Our results indicate that, glycation process could impact on the conformation of the residues involved in the DPZ binding cavity on α-helix domain. Therefore, DPZ is not able to bind its specific cavity to induce its inhibitory effects on GLY-AChE.