Keratin 17 and Collagen type 1 genes: Esophageal cancer molecular marker discovery and evaluation

ABSTRACT One hundred eighty pairs of tissues of esophageal squamous cell carcinoma (ESCC) were tested by the transcriptome sequencing in order to explore etiology factors. The chi‐square test and correlation analysis demonstrated that the relative expression levels of keratin 17 (KRT17) and collagen...

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Published inThe clinical respiratory journal Vol. 18; no. 7; pp. e13793 - n/a
Main Authors Pan, Huiwen, Hong, Jie, Shao, Aizhong, Zhao, Zhiguo, Ding, Guowen, Fang, Zhijie, Chen, Keping, Zhu, Jingfeng
Format Journal Article
LanguageEnglish
Published England John Wiley & Sons, Inc 01.07.2024
John Wiley and Sons Inc
Wiley
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Summary:ABSTRACT One hundred eighty pairs of tissues of esophageal squamous cell carcinoma (ESCC) were tested by the transcriptome sequencing in order to explore etiology factors. The chi‐square test and correlation analysis demonstrated that the relative expression levels of keratin 17 (KRT17) and collagen type I α1 chain (COL1A1) were significantly higher in EC with diabetes. Expression of KRT17 was correlated with blood glucose (r = 0.204, p = 0.001) and tumor size (r = −0.177, p = 0.038) in patients. COL1A1 correlated with age (r = −0.170, p = 0.029) and blood glucose levels (r = 0.190, p = 0.015). Experimental results of qRT‐PCR: KRT17 and COL1A1 genes were highly expressed in ESCC (p < 0.05). When the two genes were used as a combination test, the positive detection rate of EC was 90.6%, and the ROC curve had greater power. The KRT17 and COL1A1 genes had the potential to be biomarkers for the diagnosis of ESCC. Testing the KRT17 gene and the COL1A1 gene from 180 paired ESCC tissues by using transcriptome technology, para‐cacinoma tissues as a control group and carcinoma tissues as a case group. Recording every factor, including patient sex, age, smoking, alcohol, blood glucose, and tumor size, from the electronic medical system. Analyzing experimental data from two groups, both KRT17 and COL1A1 mRNA were highly expressed in case tissues, which are also correlated with age, blood glucose and tumor size. KRT17 and COL1A1 are potential biomarkers for esophageal cancer in the Chinese population.
Bibliography:Funding information
This research was funded by the Jiangsu University Medical Education Collaborative Innovation Fund (JDY2023007). Zhenjiang City Research Projects of the Jinshan Medical Talent (2022‐JSYZ‐20). Key R&D Plan‐Social Development Project in Zhenjiang City (SH2022041).
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Funding information This research was funded by the Jiangsu University Medical Education Collaborative Innovation Fund (JDY2023007). Zhenjiang City Research Projects of the Jinshan Medical Talent (2022‐JSYZ‐20). Key R&D Plan‐Social Development Project in Zhenjiang City (SH2022041).
ISSN:1752-6981
1752-699X
1752-699X
DOI:10.1111/crj.13793