Complete mitochondrial genome of Caloglyphus berlesei (Acaridae: Astigmata): The first representative of the genus Caloglyphus

The complete circular mitochondrial genome (mitogenome) of Caloglyphus berlesei is 14,273 bp in length, and contains 13 protein-coding genes (PCGs), 2 rRNA genes and 22 tRNA genes. Twenty-six genes (9 PCGs, 2 rRNA genes and 15 tRNA genes) are encoded by the majority stand (J-strand), while the remai...

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Published inJournal of stored products research Vol. 59; pp. 282 - 284
Main Authors Sun, Entao, Li, Chaopin, Li, Shu, Gu, Shengli, Nie, Liuwang
Format Journal Article
LanguageEnglish
Published Oxford Elsevier Ltd 01.10.2014
Elsevier
Subjects
Acaridae
Agronomy. Soil science and plant productions
Astigmata
Biological and medical sciences
Caloglyphus
Caloglyphus berlesei
Fundamental and applied biological sciences. Psychology
General agronomy. Plant production
Harvesting. Postharvest. Storage
Largest non-coding region
Mitochondrial genome
Vegetative propagation. Sowing and planting. Harvesting
Acaridae
Largest non-coding region
Caloglyphus berlesei
Mitochondrial genome
Acaridida
Stored food product
Acariformes
Arachnida
Mitochondria
Acari
Arthropoda
Invertebrata
Genome
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Summary:The complete circular mitochondrial genome (mitogenome) of Caloglyphus berlesei is 14,273 bp in length, and contains 13 protein-coding genes (PCGs), 2 rRNA genes and 22 tRNA genes. Twenty-six genes (9 PCGs, 2 rRNA genes and 15 tRNA genes) are encoded by the majority stand (J-strand), while the remaining are located on the minority strand (N-strand). Most inferred tRNA genes of C. berlesei are short (47–63 bp, average 53.6 ± 3.49 bp) and atypical lacking either the D- or T-arm. The largest non-coding region (341 bp) is present between trnF and trnS1, and contains a microsatellite-like (AT)n sequence and putative secondary structure features. This is the first description of a complete mitogenome of a species belonging to the Caloglyphus (Acaridae: Astigmata) genus. •Sequenced the first complete mitogenome from the Caloglyphus genus.•Revealing that Caloglyphus berlesei mitogenome is highly rearranged.•Most inferred tRNA genes of Caloglyphus berlesei are short and atypical.•Evaluation of largest non-coding region within the Astigmata.
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ISSN:0022-474X
1879-1212
DOI:10.1016/j.jspr.2014.06.010