Immunogenetics of prostate cancer and benign hyperplasia - the potential use of an HLA-G variant as a tag SNP for prostate cancer risk
Human leukocyte antigen G (HLA‐G) is an immunomodulatory molecule with important roles both physiologically as well as an escape mechanism of cancer cells. In this study, we evaluated the impact of eight polymorphisms at the 3′ untranslated region (3′UTR) of the HLA‐G gene in the development of pros...
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Published in | HLA Vol. 87; no. 2; pp. 79 - 88 |
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Main Authors | , , , , , |
Format | Journal Article |
Language | English |
Published |
Oxford, UK
Blackwell Publishing Ltd
01.02.2016
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Subjects | |
Online Access | Get full text |
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Summary: | Human leukocyte antigen G (HLA‐G) is an immunomodulatory molecule with important roles both physiologically as well as an escape mechanism of cancer cells. In this study, we evaluated the impact of eight polymorphisms at the 3′ untranslated region (3′UTR) of the HLA‐G gene in the development of prostate cancer (PCa) and benign prostatic hyperplasia (BPH). A total of 468 DNA samples of Brazilian men predominantly Euro‐descendant with PCa (N = 187), BPH (N = 152) and healthy control individuals (N = 129) were evaluated. The HLA‐G 3′UTR region was amplified by polymerase chain reaction (PCR), sequenced and genotyped to identify the 14 bp insertion/deletion (rs371194629), +3003T/C (rs1707), +3010C/G (rs1710), +3027A/C (rs17179101), +3035C/T (rs17179108), +3142G/C (rs1063320), +3187A/G (rs9380142) and +3196C/G (rs1610696) polymorphisms. Regression logistic and chi‐square tests were performed to verify the influence of single nucleotide polymorphisms (SNPs) in PCa and/or BPH susceptibility, as well as in PCa progression (clinicopathological status). Our data showed the UTR‐4 haplotype as a risk factor to PCa in comparison with control [odds ratio (OR) 2.35, 95% confidence interval (CI) 1.39–3.96, Padjusted = 0.003) and BPH groups (OR 1.82, 95% CI 1.15–2.86, Padjusted = 0.030). Further, the ‘non‐14bp Ins_ + 3142G_+3187A’ haplotype (OR 1.56, 95% CI 1.10–2.20, Padjusted = 0.036), the +3003CT genotype (OR 4.44, 95% CI 1.33–4.50, Padjusted = 0.032) and the +3003C allele (OR 2.33, 95% CI 1.38–3.92, Padjusted = 0.016) also conferred susceptibility to PCa. Our data suggest an important influence of HLA‐G 3′UTR polymorphisms in PCa susceptibility and support the use of the +3003 variant as a tag SNP for PCa risk. |
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Bibliography: | Conselho Nacional de Desenvolvimento Científico e Tecnológico CNPq - No. 306349/2011-6; No. 141916/2012-5; No. 135450/2009-8; No. 473115/2011-5 ark:/67375/WNG-DMBLZ014-J Table S1. Allelic and genotypic distribution of HLA-G 3′ untranslated region polymorphisms among cases and control groups.Table S2. Linkage disequilibrium patterns for the pairs of polymorphic sites evaluated at the HLA-G 3′ untranslated region in control group.Table S3. Linkage disequilibrium patterns for the pairs of polymorphic sites evaluated at the HLA-G 3′ untranslated region in BPH group.Table S4. Linkage disequilibrium patterns for pairs of polymorphic sites evaluated at the HLA-G 3′ untranslated region in prostate cancer group.Table S5. Distribution of the HLA-G 3′ untranslated region alleles and genotypes among Gleason score and tumor stage groups of prostate cancer.Table S6. Distribution of the HLA-G 3′ untranslated region haplotypes among Gleason score and tumor stage groups of prostate cancer. Fundo do Incentivo à Pesquisa e Eventos/Hospital de Clínicas de Porto Alegre FIPE/HCPA - No. 14-0462 istex:A9B62D76B047573FD109FBB7D297985C564E106D ArticleID:TAN12741 Fundação de Amparo à Pesquisa do Estado do Rio Grande do Sul - No. 10/1516-6; No. 12/2151-2 |
ISSN: | 2059-2302 2059-2310 |
DOI: | 10.1111/tan.12741 |