Nucleic acid-based fluorescent methods for the determination of DNA repair enzyme activities: A review
DNA repair pathways are closely associated with the maintenance of genomic integrity, disease outbreak, and the development of therapeutics. Owing to these significances, novel analytical methods for enzymes that are involved in the DNA repair pathways have been actively investigated. This review fo...
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Published in | Analytica chimica acta Vol. 1060; pp. 30 - 44 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
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Elsevier B.V
04.07.2019
Elsevier BV |
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Abstract | DNA repair pathways are closely associated with the maintenance of genomic integrity, disease outbreak, and the development of therapeutics. Owing to these significances, novel analytical methods for enzymes that are involved in the DNA repair pathways have been actively investigated. This review focuses on discussions on nucleic acid-based methods, especially those based on the fluorescence, for the determination of DNA repair enzymes. Furthermore, this review not only provides meaningful insights in creating ingenious fluorescent detection methods but it also suggests future directions that will be followed in developing new analytical technologies for the DNA repair enzymes.
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•Nucleic acid-based fluorescent methods for assaying DNA repair enzymes, are summarized.•Novel assays which utilize functional nucleic acids, are discussed.•Ultra-sensitive strategies that rely on isothermal nucleic acid amplification, are discussed.•Future directions in the area of fluorescent enzyme assays are suggested. |
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AbstractList | DNA repair pathways are closely associated with the maintenance of genomic integrity, disease outbreak, and the development of therapeutics. Owing to these significances, novel analytical methods for enzymes that are involved in the DNA repair pathways have been actively investigated. This review focuses on discussions on nucleic acid-based methods, especially those based on the fluorescence, for the determination of DNA repair enzymes. Furthermore, this review not only provides meaningful insights in creating ingenious fluorescent detection methods but it also suggests future directions that will be followed in developing new analytical technologies for the DNA repair enzymes. DNA repair pathways are closely associated with the maintenance of genomic integrity, disease outbreak, and the development of therapeutics. Owing to these significances, novel analytical methods for enzymes that are involved in the DNA repair pathways have been actively investigated. This review focuses on discussions on nucleic acid-based methods, especially those based on the fluorescence, for the determination of DNA repair enzymes. Furthermore, this review not only provides meaningful insights in creating ingenious fluorescent detection methods but it also suggests future directions that will be followed in developing new analytical technologies for the DNA repair enzymes. [Display omitted] •Nucleic acid-based fluorescent methods for assaying DNA repair enzymes, are summarized.•Novel assays which utilize functional nucleic acids, are discussed.•Ultra-sensitive strategies that rely on isothermal nucleic acid amplification, are discussed.•Future directions in the area of fluorescent enzyme assays are suggested. |
Author | Kim, Hansol Park, Hyun Gyu Lee, Chang Yeol Park, Ki Soo |
Author_xml | – sequence: 1 givenname: Chang Yeol surname: Lee fullname: Lee, Chang Yeol organization: Department of Chemical and Biomolecular Engineering (BK 21+ program), KAIST, Daehak-ro 291, Yuseong-gu, Daejeon, 34141, Republic of Korea – sequence: 2 givenname: Hansol surname: Kim fullname: Kim, Hansol organization: Department of Chemical and Biomolecular Engineering (BK 21+ program), KAIST, Daehak-ro 291, Yuseong-gu, Daejeon, 34141, Republic of Korea – sequence: 3 givenname: Ki Soo orcidid: 0000-0002-0545-0970 surname: Park fullname: Park, Ki Soo email: kskonkuk@gmail.com organization: Department of Biological Engineering, College of Engineering, Konkuk University, Seoul, 05029, Republic of Korea – sequence: 4 givenname: Hyun Gyu orcidid: 0000-0001-9978-3890 surname: Park fullname: Park, Hyun Gyu email: hgpark@kaist.ac.kr organization: Department of Chemical and Biomolecular Engineering (BK 21+ program), KAIST, Daehak-ro 291, Yuseong-gu, Daejeon, 34141, Republic of Korea |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/30902329$$D View this record in MEDLINE/PubMed |
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Cites_doi | 10.1021/ja404653q 10.1016/j.bios.2016.07.038 10.1021/ac302424f 10.1016/j.bios.2014.02.040 10.1093/nar/gkr504 10.1021/ja051362f 10.1039/C5AN02483H 10.1021/acs.chemrev.7b00063 10.1021/ja310585e 10.1093/nar/gks975 10.1016/j.tet.2006.07.113 10.1016/j.bios.2017.06.052 10.1039/C7AY00709D 10.1016/j.foodchem.2018.10.130 10.1016/j.ab.2010.10.011 10.1021/ac300745f 10.1038/35077232 10.1021/jp951507c 10.1021/ja076411y 10.1039/C7CC07057H 10.1038/35002510 10.1016/j.dnarep.2009.11.009 10.1038/35020524 10.1016/j.ab.2016.10.001 10.1039/b923462d 10.1016/j.bios.2016.08.022 10.1023/A:1022609714768 10.1039/c3cc41129j 10.1126/science.280.5366.1066 10.1093/carcin/bgi319 10.1039/C0CC04312E 10.1021/ja8005644 10.1093/carcin/bgn250 10.1021/acschembio.7b00919 10.1039/C5CC02060C 10.1093/mutage/geq028 10.1016/j.bios.2012.10.037 10.1021/ac500192r 10.1016/j.bios.2016.11.032 10.1073/pnas.0610677104 10.1111/cas.12366 10.1016/1074-5521(94)90014-0 10.1016/S1074-5521(97)90123-X 10.1021/jo049824f 10.1002/anie.201001375 10.1073/pnas.92.10.4641 10.1039/C5CC05565B 10.1039/C3CC47444E 10.1021/bi100304b 10.1006/jmbi.1997.1281 10.1186/1757-2215-6-74 10.1021/ja0021316 10.1021/acs.analchem.6b04673 10.1039/b413959c 10.1039/C5SC00228A 10.1039/b716774a 10.1002/anie.200901555 10.1039/C7NR07348H 10.1038/344467a0 10.1039/C5AN01032B 10.1016/j.snb.2013.01.063 10.1002/med.20226 10.1002/anie.201304631 10.1021/cr980321h 10.1021/ac500834g 10.1021/jacs.5b01778 10.1039/C4NR00944D 10.1016/j.talanta.2018.01.075 10.1016/j.molcel.2005.01.016 10.1371/journal.pone.0131330 10.1016/j.bios.2012.08.053 10.1002/chem.201704346 10.1111/j.1349-7006.2007.00671.x 10.1038/nbt0396-303 10.3390/molecules22122108 10.1002/cbic.200700542 10.1021/ja031931o 10.1016/j.bios.2015.02.005 10.1016/j.saa.2015.06.052 10.1371/journal.pone.0081667 10.1039/b712421j 10.1002/anie.201005375 10.1039/C7CC06290G 10.1038/nchem.957 10.1016/j.copbio.2013.10.013 10.1074/jbc.M109.042143 10.1016/j.tet.2006.08.108 10.1006/jmbi.1997.1165 10.1039/C7RA09226A 10.1039/C5SC02808F 10.1039/C5CC05010C 10.1016/j.bios.2014.10.029 10.1021/nl101773c 10.1038/nature06451 10.1007/s00216-016-9522-z 10.1002/anie.201005246 10.1039/C6AN01165A 10.1039/C8CS00011E 10.1039/C7CC00946A 10.1016/j.talanta.2014.07.092 10.1016/j.ceb.2006.03.004 10.1002/ijc.27512 10.1016/j.trac.2018.09.013 10.1021/ac4038043 10.1073/pnas.95.1.288 10.1016/j.ccr.2009.12.046 10.1002/anie.200907256 10.1016/j.aca.2016.11.003 10.1002/ange.200901887 10.1016/j.chembiol.2011.07.003 10.1016/j.bios.2015.01.069 10.1038/nnano.2007.104 10.1093/nar/gkw1205 10.1146/annurev.anchem.111808.073617 10.1039/c2an16287c 10.1016/j.bios.2017.11.028 10.1002/chem.201802822 10.1021/jacs.6b00986 10.1016/j.molcel.2010.09.019 10.1161/01.CIR.0000026393.47805.21 10.1039/C5AN00304K 10.1021/acs.analchem.7b02899 10.2174/157340609789117840 10.1074/jbc.M108856200 10.1021/ac2013114 10.1002/chem.200902166 10.1021/acsbiomaterials.8b00204 10.1039/c2cc17148a 10.1016/j.bios.2010.10.026 10.1016/j.bios.2014.09.068 10.1021/acs.analchem.7b01655 10.1016/j.ab.2018.06.014 10.1016/j.bios.2017.03.035 10.1002/anie.201100477 10.1039/C5AN02255J 10.1039/c3sc51228b 10.1039/C4CC05309E 10.1021/ac401966d 10.1016/j.snb.2018.02.054 10.1038/nrc1652 10.1021/cr030183i 10.1016/j.bios.2009.07.002 10.1007/s00216-016-9398-y 10.1002/anie.201108135 10.2174/1389450111007011336 10.1039/c3cc49873e 10.1088/0957-4484/25/4/045101 10.1021/ja902951b 10.1039/C6AY00900J 10.1021/acs.analchem.8b03959 10.1002/anie.201801806 10.1021/ja071641y 10.1016/j.chembiol.2003.12.012 10.1038/nrc3399 10.1002/ange.201403615 10.1073/pnas.0504926102 10.1021/acschembio.5b00452 10.1039/C5CC04759E 10.1039/C4CC06170E 10.1073/pnas.0407024101 10.1021/ja055846n 10.1039/C5CS00607D 10.1039/C5AN00968E 10.1016/j.aca.2017.08.042 10.1002/anie.200800960 10.1016/j.bios.2012.10.064 10.1089/cbr.2012.1287 10.1007/s00604-017-2610-8 10.1021/ac501730u 10.1073/pnas.0408039101 10.1039/C6NR01427E 10.1039/b710306a 10.1021/acs.analchem.5b01634 10.1016/j.ab.2007.04.049 10.1016/j.dnarep.2013.04.015 10.1021/bi00083a032 10.1155/2015/419318 10.1002/cbic.200700296 10.1021/ja034450d 10.1021/ac301669y 10.1016/j.bios.2016.01.046 10.1002/chem.201003646 10.1016/j.cbpa.2006.04.003 10.1039/C7NR04060A 10.1021/ac1025896 10.1006/jmbi.1996.0640 10.1017/S0033583510000090 10.1038/362709a0 10.1021/cr0306743 10.1021/acs.accounts.7b00262 |
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Keywords | Fluorescent biosensor DNA repair enzyme Inhibitor Disease DNA damage Nucleic acid |
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References | Conlon, Yang, Wu, Chen, Martinez, Kim, Stevens, Marti, Jockusch, Turro (bib161) 2008; 130 Ma, Liu, Zhang, Zhang (bib67) 2017; 53 Wang, Cao, Chiuman, Li, Xi (bib133) 2010; 49 Park, Lee, Kang, Park (bib142) 2017; 88 Li, Lu (bib128) 2000; 122 Huang, Gao, Jia, Kim, Li (bib166) 2014; 86 Donley, Jaruga, Coskun, Dizdaroglu, McCullough, Lloyd (bib178) 2015; 10 Liu, Chang, Li (bib123) 2017; 50 He, Wang, Tan, Liu, Lin, He, Li, Huang, Li (bib189) 2003; 125 Tao, Li, Ren, Qu (bib34) 2015; 44 Wilhelmsson (bib89) 2010; 43 Jiang, Liu, Khusbu, Ma, Ping, Zhang, Wu, Chen (bib104) 2018; 555 Zhang, Shi, Jin (bib170) 2015; 140 David, Williams (bib13) 1998; 98 Ge, Tang, Xi, Li, Yu, Jiang, Chu (bib77) 2014; 6 Kong, Xu, Xu, Xiang, Yuan, Chai (bib93) 2013; 42 Wu, Ma, Zhao, Chen, Deng (bib144) 2019; 277 Wu, Wang, Fan, Zhou, Liu, Wang (bib72) 2015; 51 Lee, Park, Park (bib85) 2017; 98 Leung, Chan, Man, Wang, Lam, Cheng, Fong, Hsiao, Ma (bib98) 2010; 83 Wang, Pan, Wei, Liu, Wang (bib172) 2017; 53 Germann, Johnson, Spring (bib19) 2012; 32 Roy, Ohulchanskyy, Bharali, Pudavar, Mistretta, Kaur, Prasad (bib190) 2005; 102 Friedrichs, Simmel (bib139) 2007; 8 Wilson, Gao, Kool (bib192) 2007; 63 Leung, Zhong, He, Lu, Chan, Ma (bib26) 2013; 4 Navani, Li (bib40) 2006; 10 Hoeijmakers (bib7) 2001; 411 Elbaz, Shlyahovsky, Willner (bib126) 2008 Fire, Xu (bib149) 1995; 92 Ge, Huang, Xi, Yu, Jiang, Chu (bib167) 2014; 50 Liu, Cao, Lu (bib27) 2009; 109 Qing, He, Huang, Wang, Zou, Qing, Mao, Shi, He (bib65) 2014; 86 Yurke, Turberfield, Mills, Simmel, Neumann (bib158) 2000; 406 Xu, Gao, Li, Jin (bib159) 2016; 80 Tian, Kong, Zhu, Chen, Chu (bib115) 2015; 131 Klarmann, Hawkins, Le Grice (bib16) 2002; 4 Yang, Mu, Chen, Wang, Gao (bib36) 2018; 4 Sultana, McNeill, Abbotts, Mohammed, Zdzienicka, Qutob, Seedhouse, Laughton, Fischer, Patel (bib182) 2012; 131 Li, Chen, Xu, Wen, Yang, Liu (bib46) 2018; 24 Mirbahai, Kershaw, Green, Hayden, Meldrum, Hodges (bib59) 2010; 9 Liu, Martin (bib88) 2002; 277 Qing, He, He, Ye, Shangguan, Liu, Yuan, Wang (bib116) 2017; 94 Dirks, Pierce (bib164) 2004; 101 Xi, Li, Du, Yu, Jiang (bib169) 2016; 141 Martin, McCabe, Mullarkey, Cummins, Burgess, Nakabeppu, Oka, Kay, Lord, Ashworth (bib183) 2010; 17 Cronican, Beier, Davis, Tseng, Li, Thompson, Shih, May, Cepko, Kung (bib78) 2011; 18 Shah, Cho, Thulstrup, Bhang, Ahn, Choi, Rorvig-Lund, Yang (bib117) 2014; 25 Wang, Ren, Zhang, Tang, Zhang (bib52) 2017; 89 Kimura, Kawai, Fujitsuka, Majima (bib90) 2007; 63 Beiranvand, Abbasi, Dehdashtian, Karimi, Azadbakht (bib50) 2017; 518 Shi, Liu, Ma, Zhong (bib145) 2013; 86 Porchetta, Vallée-Bélisle, Plaxco, Ricci (bib57) 2012; 134 Cleaver (bib6) 2005; 5 Liu, Lu (bib127) 2007 Yin, Choi, Calvert, Pierce (bib155) 2008; 451 Zhang, Seelig (bib157) 2011; 3 He, Leung, Wang, Chan, Leung, Ma (bib107) 2014; 50 Li, Ellington, Chen (bib156) 2011; 39 Zhao, Fan, Peng, Zhao, Tong, Wang, Liu (bib75) 2017; 90 Kankia (bib92) 2011; 409 Chen, Yang, Wu, Conlon, Kim, Lin, Tan (bib68) 2008; 9 Famulok, Hartig, Mayer (bib132) 2007; 107 Khusbu, Zhou, Chen, Ma, Wang (bib103) 2018; 109 Deuss, den Heeten, Laan, Kamer (bib121) 2011; 17 Deng, Jin, Chen, Wang (bib97) 2012; 137 Huang, Wu, Chen, Zhu, Yang, Yang, Wang, Tan (bib160) 2011; 50 Lee, Park, Park (bib84) 2015; 51 Park, Park (bib31) 2014; 28 Lee, Kim, Ahn, Park, Park (bib147) 2017; 7 Zhang, Kong, Lu (bib39) 2011; 4 El-Yazbi, Loppnow (bib83) 2013; 85 Jia, Li, Liu, Cheng (bib143) 2010; 49 Wang, Li, Li, Li, Huang, Nie, Yao (bib81) 2015; 51 Feng, Duan, Liu, Feng, Wang, Li, Zhu (bib177) 2009; 48 Liu, Tang, Wang, Tan, Li, Guo, Meng, Ma (bib63) 2005; 130 Kermani, Hosseini, Dadmehr, Ganjali (bib110) 2016; 408 Qing, He, He, Wang, Xu, Qing, Yang (bib29) 2013; 52 Patel, Suri, Jiang, Jiang, Fan, Kumar, Nonin (bib47) 1997; 272 Kolpashchikov, Stojanovic (bib140) 2005; 127 Bharali, Klejbor, Stachowiak, Dutta, Roy, Kaur, Bergey, Prasad, Stachowiak (bib191) 2005; 102 Park, Lee, Park (bib86) 2012; 48 Liu, Lai, Huang, Zhao, Wang, Weng, Zhou (bib111) 2015; 68 Bath, Turberfield (bib28) 2007; 2 Yao, Xiang, Deng, Xia, Fu (bib150) 2013; 181 Zhang, Li, Tang, Zhang (bib176) 2017; 89 Ali, Aguirre, Lazim, Li (bib131) 2011; 50 Jin, Yang, Zhang, Liu, Zhou, Wang, Zhang (bib73) 2018 Wu, Ma, Liu, He, Zeng, Wang (bib106) 2017; 9 Zhou, Shen, Sun, Wang, Zhang, Pei (bib105) 2015; 140 Su, Zhu, Zhang, Xiao, Zhao (bib60) 2012; 84 Lan, Chen, Chang (bib118) 2011; 26 Lee, Jang, Park, Park (bib162) 2017; 9 Wilson, Kool (bib51) 2017; 13 Martinet, Knaapen, De Meyer, Herman, Kockx (bib21) 2002; 106 Song, Zhang, Zhao (bib62) 2009; 25 Lee, Park, Park (bib146) 2018; 262 Zhai, Liu, Huang, Fang, Zhao (bib186) 2016; 45 Beharry, Lacoste, O'Connor, Kool (bib187) 2016; 138 Liu, Yang, Wang, Tan, Li, Tang (bib82) 2007; 366 Andreassen, Ho, D'andrea (bib4) 2006; 27 Tatyana, Francesca, Luca, Giovanni, Yung-Chi, Ginger, Enzo (bib17) 2009; 5 Johnson, Okyere, Joseph, Musier-Forsyth, Kankia (bib91) 2012; 41 Zhou, Xu, Dong, Wang (bib95) 2015; 65 Wu, Wang, Zhu, Jiang (bib163) 2015; 68 Jacobs, Calkins, Jadhav, Dorjsuren, Maloney, Simeonov, Jaruga, Dizdaroglu, McCullough, Lloyd (bib179) 2013; 8 Maynard, Schurman, Harboe, de Souza-Pinto, Bohr (bib8) 2008; 30 Tao, Song, Sato, Nishizawa, Teramae, Tong, Xiang (bib108) 2015; 51 Qi, Xiu, Yu, Huang, Li (bib49) 2017; 87 Moeller, Arap, Pasqualini (bib14) 2010; 11 Harroun, Prévost-Tremblay, Lauzon, Desrosiers, Wang, Pedro, Vallée-Bélisle (bib42) 2018; 10 Lawrence, Phillips, Liu (bib80) 2007; 129 Zhou, Xi, Liang, Chen, Tang, Jiang (bib74) 2013; 41 Zhuang, Lai, Chen, Tang (bib151) 2014; 50 Lee, Kang, Park, Park (bib154) 2018; 185 Essers, Vermeulen, Houtsmuller (bib5) 2006; 18 Hollenstein, Hipolito, Lam, Dietrich, Perrin (bib125) 2008; 47 Wang, Zhou, Liu, Zhao, Fan, Wang, Tong (bib43) 2017; 89 Nakayama, Sintim (bib129) 2009; 131 Ono, Wang, Koo, Engstrom, David, Kool (bib188) 2012; 51 Lindahl (bib1) 1993; 362 Helbock, Beckman, Shigenaga, Walter, Woodall, Yeo, Ames (bib20) 1998; 95 Krasheninina, Novopashina, Apartsin, Venyaminova (bib66) 2017; 22 Curtin (bib180) 2012; 12 Cruz, Withers, Li (bib134) 2004; 11 Wu, Hu, Li, Wang, Gao, Lu, Fan (bib69) 2011; 47 Hong, Sooter (bib48) 2015 Kim, Estabrook, Braun, Lee, Reich (bib76) 2007 Hu, Pu, Huang, Ren, Qu (bib100) 2010; 16 Seidel, Schulz, Sauer (bib61) 1996; 100 Zhou, Saran, Liu (bib41) 2017; 117 Wu, Ma, Deng, Fang, Tang, Zhu, Wang (bib102) 2018; 182 Wu, Liu, Yang, Jiang (bib168) 2015; 137 Xu, Li (bib96) 2015; 151 Leung, He, Ma, Zhong, Chan, Zhou, Mergny, Leung, Ma (bib99) 2013; 49 Ma, Liu, Wang, Jin, Wang (bib101) 2016; 408 Flaender, Costa, Nonglaton, Saint-Pierre, Gasparutto (bib173) 2016; 141 Tyagi, Kramer (bib56) 1996; 14 Porchetta, Vallée-Bélisle, Plaxco, Ricci (bib58) 2013; 135 Wang, Wang, Zhang, Tang, Zhang (bib54) 2017; 53 Dodson, Schrock, Lloyd (bib18) 1993; 32 Gao, Hu, Zhang, Gao, Hong (bib24) 2013; 28 Vosch, Antoku, Hsiang, Richards, Gonzalez, Dickson (bib32) 2007; 104 Priet, Gros, Navarro, Boretto, Canard, Quérat, Sire (bib15) 2005; 17 Park, Lee, Park, Park (bib124) 2017; 23 Gines, Saint-Pierre, Gasparutto (bib175) 2014; 58 Hu, Liu, Kong, Donovan, Zhang, Tan, Shen, Yu (bib112) 2013; 42 Rotaru, Dutta, Jentzsch, Gothelf, Mokhir (bib30) 2010; 49 Jiang, Wei, Xu, Yuan, Xiang (bib45) 2017; 949 Lei, Huang, Nie, Hu, Li, Lu, Han, Yao (bib79) 2014; 126 Li, Fu, Park (bib87) 2010; 46 Santiago-Gonzalez, Monguzzi, Capitani, Prato, Santambrogio, Meinardi, Brovelli (bib38) 2018; 57 Yeh, Sharma, Han, Martinez, Werner (bib114) 2010; 10 Le, Xing, Lee, Leadon, Weinfeld (bib22) 1998; 280 Ciccia, Elledge (bib2) 2010; 40 Maehara, Egashira, Oki, Kakeji, Tsuzuki (bib9) 2008; 99 Park, Mangal, Frey, Harvey, Blair, Penning (bib23) 2009; 284 Chen, Liu, Cao, Ren, Qu (bib37) 2018; 47 Huang, Zhao, Shi, Chen, Chen, Liang (bib174) 2011; 83 Lin, Cai, Wang, Zhu, Yang, Chen (bib94) 2014; 86 Cao, Jin, Li (bib113) 2016; 8 Jiang, Krosky, Seiple, Stivers (bib184) 2005; 127 Bruner, Norman, Verdine (bib11) 2000; 403 Dang, Jayasena (bib136) 1996; 264 Obtułowicz, Swoboda, Speina, Gackowski, Rozalski, Siomek, Janik, Janowska, Cieśla, Jawien (bib10) 2010; 25 Song, Liang, Zhang, Wang, Li, Fan (bib70) 2009; 121 Yakimovich, Alekseev, Maksimenko, Voronina, Lunin (bib138) 2003; 68 Zhang, Cai, Qi, Lu, Qian (bib109) 2013; 85 Richards, Choi, Hsiang, Antoku, Vosch, Bongiorno, Tzeng, Dickson (bib33) 2008; 130 Du, Li, Xiao, Yu, Jiang (bib55) 2017; 991 Shi, Zhang, Cheng, Li, Jin (bib171) 2015; 140 Ahn, Lee, Park, Park (bib148) 2017; 13 Yu, Wu, Huang, Chen, Tan (bib185) 2016; 7 Wang, Wu, Liu, Chu (bib165) 2015; 87 Wang, Elbaz, Teller, Willner (bib130) 2011; 50 Xu, Wang, Guo, Zhou, Lv, Chen, Liu (bib25) 2013; 6 Condie, Yan, Gerson, Wang (bib53) 2015; 10 Breaker, Joyce (bib120) 1994; 1 Verdine, Bruner (bib3) 1997; 4 Petty, Zheng, Hud, Dickson (bib35) 2004; 126 Robertson, Joyce (bib119) 1990; 344 Park, Lee, Park (bib141) 2015; 51 Hosoya, Miyagawa (bib181) 2014; 105 Fujimoto, Shimizu, Inouye (bib64) 2004; 69 Li, Qiu, Hou, Deng (bib152) 2015; 64 Adornetto, Porchetta, Palleschi, Plaxco, Ricci (bib122) 2015; 6 Park (bib135) 2017; 102 Lin, Jayasena (bib137) 1997; 271 Xiang, Lu (bib44) 2012; 84 Iyama, Wilson (bib12) 2013; 12 Wu, Yan, Xu, Jiang (bib153) 2016; 141 Cen, Yang, Yu, Chen, Chu (bib71) 2016; 8 Lee (10.1016/j.aca.2018.12.055_bib154) 2018; 185 Li (10.1016/j.aca.2018.12.055_bib152) 2015; 64 Essers (10.1016/j.aca.2018.12.055_bib5) 2006; 18 Yakimovich (10.1016/j.aca.2018.12.055_bib138) 2003; 68 Dirks (10.1016/j.aca.2018.12.055_bib164) 2004; 101 Richards (10.1016/j.aca.2018.12.055_bib33) 2008; 130 Germann (10.1016/j.aca.2018.12.055_bib19) 2012; 32 Shi (10.1016/j.aca.2018.12.055_bib145) 2013; 86 Zhang (10.1016/j.aca.2018.12.055_bib176) 2017; 89 Santiago-Gonzalez (10.1016/j.aca.2018.12.055_bib38) 2018; 57 Du (10.1016/j.aca.2018.12.055_bib55) 2017; 991 Navani (10.1016/j.aca.2018.12.055_bib40) 2006; 10 Conlon (10.1016/j.aca.2018.12.055_bib161) 2008; 130 Leung (10.1016/j.aca.2018.12.055_bib99) 2013; 49 Ahn (10.1016/j.aca.2018.12.055_bib148) 2017; 13 Ma (10.1016/j.aca.2018.12.055_bib67) 2017; 53 Hu (10.1016/j.aca.2018.12.055_bib100) 2010; 16 Wang (10.1016/j.aca.2018.12.055_bib54) 2017; 53 Wilhelmsson (10.1016/j.aca.2018.12.055_bib89) 2010; 43 Xu (10.1016/j.aca.2018.12.055_bib159) 2016; 80 Deuss (10.1016/j.aca.2018.12.055_bib121) 2011; 17 Friedrichs (10.1016/j.aca.2018.12.055_bib139) 2007; 8 Tian (10.1016/j.aca.2018.12.055_bib115) 2015; 131 Jiang (10.1016/j.aca.2018.12.055_bib45) 2017; 949 Qing (10.1016/j.aca.2018.12.055_bib65) 2014; 86 Wang (10.1016/j.aca.2018.12.055_bib172) 2017; 53 Wu (10.1016/j.aca.2018.12.055_bib168) 2015; 137 Leung (10.1016/j.aca.2018.12.055_bib26) 2013; 4 Iyama (10.1016/j.aca.2018.12.055_bib12) 2013; 12 Li (10.1016/j.aca.2018.12.055_bib87) 2010; 46 Robertson (10.1016/j.aca.2018.12.055_bib119) 1990; 344 Tyagi (10.1016/j.aca.2018.12.055_bib56) 1996; 14 Qi (10.1016/j.aca.2018.12.055_bib49) 2017; 87 Wang (10.1016/j.aca.2018.12.055_bib43) 2017; 89 Park (10.1016/j.aca.2018.12.055_bib142) 2017; 88 Wang (10.1016/j.aca.2018.12.055_bib133) 2010; 49 Gines (10.1016/j.aca.2018.12.055_bib175) 2014; 58 Zhou (10.1016/j.aca.2018.12.055_bib105) 2015; 140 He (10.1016/j.aca.2018.12.055_bib107) 2014; 50 Qing (10.1016/j.aca.2018.12.055_bib29) 2013; 52 Lee (10.1016/j.aca.2018.12.055_bib85) 2017; 98 Andreassen (10.1016/j.aca.2018.12.055_bib4) 2006; 27 Park (10.1016/j.aca.2018.12.055_bib135) 2017; 102 Patel (10.1016/j.aca.2018.12.055_bib47) 1997; 272 Zhao (10.1016/j.aca.2018.12.055_bib75) 2017; 90 Dang (10.1016/j.aca.2018.12.055_bib136) 1996; 264 Yin (10.1016/j.aca.2018.12.055_bib155) 2008; 451 Hong (10.1016/j.aca.2018.12.055_bib48) 2015 Kong (10.1016/j.aca.2018.12.055_bib93) 2013; 42 Wu (10.1016/j.aca.2018.12.055_bib69) 2011; 47 Bharali (10.1016/j.aca.2018.12.055_bib191) 2005; 102 Vosch (10.1016/j.aca.2018.12.055_bib32) 2007; 104 Moeller (10.1016/j.aca.2018.12.055_bib14) 2010; 11 Fire (10.1016/j.aca.2018.12.055_bib149) 1995; 92 Wu (10.1016/j.aca.2018.12.055_bib163) 2015; 68 Cleaver (10.1016/j.aca.2018.12.055_bib6) 2005; 5 Rotaru (10.1016/j.aca.2018.12.055_bib30) 2010; 49 Breaker (10.1016/j.aca.2018.12.055_bib120) 1994; 1 Li (10.1016/j.aca.2018.12.055_bib156) 2011; 39 Ma (10.1016/j.aca.2018.12.055_bib101) 2016; 408 El-Yazbi (10.1016/j.aca.2018.12.055_bib83) 2013; 85 Zhou (10.1016/j.aca.2018.12.055_bib95) 2015; 65 Khusbu (10.1016/j.aca.2018.12.055_bib103) 2018; 109 Verdine (10.1016/j.aca.2018.12.055_bib3) 1997; 4 Feng (10.1016/j.aca.2018.12.055_bib177) 2009; 48 Ali (10.1016/j.aca.2018.12.055_bib131) 2011; 50 Lan (10.1016/j.aca.2018.12.055_bib118) 2011; 26 Adornetto (10.1016/j.aca.2018.12.055_bib122) 2015; 6 Donley (10.1016/j.aca.2018.12.055_bib178) 2015; 10 Johnson (10.1016/j.aca.2018.12.055_bib91) 2012; 41 Liu (10.1016/j.aca.2018.12.055_bib88) 2002; 277 Deng (10.1016/j.aca.2018.12.055_bib97) 2012; 137 Ge (10.1016/j.aca.2018.12.055_bib77) 2014; 6 Cao (10.1016/j.aca.2018.12.055_bib113) 2016; 8 Xiang (10.1016/j.aca.2018.12.055_bib44) 2012; 84 Lin (10.1016/j.aca.2018.12.055_bib94) 2014; 86 Famulok (10.1016/j.aca.2018.12.055_bib132) 2007; 107 Ciccia (10.1016/j.aca.2018.12.055_bib2) 2010; 40 Curtin (10.1016/j.aca.2018.12.055_bib180) 2012; 12 Jia (10.1016/j.aca.2018.12.055_bib143) 2010; 49 Zhang (10.1016/j.aca.2018.12.055_bib157) 2011; 3 Lindahl (10.1016/j.aca.2018.12.055_bib1) 1993; 362 Xu (10.1016/j.aca.2018.12.055_bib96) 2015; 151 Liu (10.1016/j.aca.2018.12.055_bib123) 2017; 50 Yu (10.1016/j.aca.2018.12.055_bib185) 2016; 7 Elbaz (10.1016/j.aca.2018.12.055_bib126) 2008 Park (10.1016/j.aca.2018.12.055_bib23) 2009; 284 Liu (10.1016/j.aca.2018.12.055_bib127) 2007 He (10.1016/j.aca.2018.12.055_bib189) 2003; 125 Zhou (10.1016/j.aca.2018.12.055_bib74) 2013; 41 Krasheninina (10.1016/j.aca.2018.12.055_bib66) 2017; 22 Flaender (10.1016/j.aca.2018.12.055_bib173) 2016; 141 Porchetta (10.1016/j.aca.2018.12.055_bib57) 2012; 134 Cen (10.1016/j.aca.2018.12.055_bib71) 2016; 8 Hoeijmakers (10.1016/j.aca.2018.12.055_bib7) 2001; 411 Liu (10.1016/j.aca.2018.12.055_bib82) 2007; 366 Lee (10.1016/j.aca.2018.12.055_bib84) 2015; 51 Qing (10.1016/j.aca.2018.12.055_bib116) 2017; 94 Wu (10.1016/j.aca.2018.12.055_bib106) 2017; 9 Obtułowicz (10.1016/j.aca.2018.12.055_bib10) 2010; 25 Jacobs (10.1016/j.aca.2018.12.055_bib179) 2013; 8 Cronican (10.1016/j.aca.2018.12.055_bib78) 2011; 18 Liu (10.1016/j.aca.2018.12.055_bib27) 2009; 109 Beiranvand (10.1016/j.aca.2018.12.055_bib50) 2017; 518 Chen (10.1016/j.aca.2018.12.055_bib68) 2008; 9 Cruz (10.1016/j.aca.2018.12.055_bib134) 2004; 11 Yang (10.1016/j.aca.2018.12.055_bib36) 2018; 4 Helbock (10.1016/j.aca.2018.12.055_bib20) 1998; 95 Xi (10.1016/j.aca.2018.12.055_bib169) 2016; 141 Kim (10.1016/j.aca.2018.12.055_bib76) 2007 Li (10.1016/j.aca.2018.12.055_bib128) 2000; 122 Jiang (10.1016/j.aca.2018.12.055_bib104) 2018; 555 Shah (10.1016/j.aca.2018.12.055_bib117) 2014; 25 Su (10.1016/j.aca.2018.12.055_bib60) 2012; 84 Zhuang (10.1016/j.aca.2018.12.055_bib151) 2014; 50 Martinet (10.1016/j.aca.2018.12.055_bib21) 2002; 106 Gao (10.1016/j.aca.2018.12.055_bib24) 2013; 28 Song (10.1016/j.aca.2018.12.055_bib62) 2009; 25 Wu (10.1016/j.aca.2018.12.055_bib153) 2016; 141 Maehara (10.1016/j.aca.2018.12.055_bib9) 2008; 99 Bruner (10.1016/j.aca.2018.12.055_bib11) 2000; 403 Petty (10.1016/j.aca.2018.12.055_bib35) 2004; 126 Dodson (10.1016/j.aca.2018.12.055_bib18) 1993; 32 Nakayama (10.1016/j.aca.2018.12.055_bib129) 2009; 131 Martin (10.1016/j.aca.2018.12.055_bib183) 2010; 17 Wang (10.1016/j.aca.2018.12.055_bib52) 2017; 89 Kolpashchikov (10.1016/j.aca.2018.12.055_bib140) 2005; 127 Yurke (10.1016/j.aca.2018.12.055_bib158) 2000; 406 Xu (10.1016/j.aca.2018.12.055_bib25) 2013; 6 Priet (10.1016/j.aca.2018.12.055_bib15) 2005; 17 Klarmann (10.1016/j.aca.2018.12.055_bib16) 2002; 4 Park (10.1016/j.aca.2018.12.055_bib124) 2017; 23 David (10.1016/j.aca.2018.12.055_bib13) 1998; 98 Tatyana (10.1016/j.aca.2018.12.055_bib17) 2009; 5 Hollenstein (10.1016/j.aca.2018.12.055_bib125) 2008; 47 Ono (10.1016/j.aca.2018.12.055_bib188) 2012; 51 Wu (10.1016/j.aca.2018.12.055_bib72) 2015; 51 Zhang (10.1016/j.aca.2018.12.055_bib39) 2011; 4 Leung (10.1016/j.aca.2018.12.055_bib98) 2010; 83 Liu (10.1016/j.aca.2018.12.055_bib111) 2015; 68 Lee (10.1016/j.aca.2018.12.055_bib147) 2017; 7 Chen (10.1016/j.aca.2018.12.055_bib37) 2018; 47 Wang (10.1016/j.aca.2018.12.055_bib81) 2015; 51 Maynard (10.1016/j.aca.2018.12.055_bib8) 2008; 30 Mirbahai (10.1016/j.aca.2018.12.055_bib59) 2010; 9 Wang (10.1016/j.aca.2018.12.055_bib130) 2011; 50 Zhang (10.1016/j.aca.2018.12.055_bib170) 2015; 140 Yeh (10.1016/j.aca.2018.12.055_bib114) 2010; 10 Lin (10.1016/j.aca.2018.12.055_bib137) 1997; 271 Harroun (10.1016/j.aca.2018.12.055_bib42) 2018; 10 Fujimoto (10.1016/j.aca.2018.12.055_bib64) 2004; 69 Wang (10.1016/j.aca.2018.12.055_bib165) 2015; 87 Huang (10.1016/j.aca.2018.12.055_bib160) 2011; 50 Le (10.1016/j.aca.2018.12.055_bib22) 1998; 280 Song (10.1016/j.aca.2018.12.055_bib70) 2009; 121 Lei (10.1016/j.aca.2018.12.055_bib79) 2014; 126 Park (10.1016/j.aca.2018.12.055_bib86) 2012; 48 Shi (10.1016/j.aca.2018.12.055_bib171) 2015; 140 Porchetta (10.1016/j.aca.2018.12.055_bib58) 2013; 135 Tao (10.1016/j.aca.2018.12.055_bib34) 2015; 44 Wu (10.1016/j.aca.2018.12.055_bib102) 2018; 182 Park (10.1016/j.aca.2018.12.055_bib141) 2015; 51 Lawrence (10.1016/j.aca.2018.12.055_bib80) 2007; 129 Lee (10.1016/j.aca.2018.12.055_bib146) 2018; 262 Wilson (10.1016/j.aca.2018.12.055_bib192) 2007; 63 Park (10.1016/j.aca.2018.12.055_bib31) 2014; 28 Kermani (10.1016/j.aca.2018.12.055_bib110) 2016; 408 Kimura (10.1016/j.aca.2018.12.055_bib90) 2007; 63 Ge (10.1016/j.aca.2018.12.055_bib167) 2014; 50 Zhai (10.1016/j.aca.2018.12.055_bib186) 2016; 45 Jin (10.1016/j.aca.2018.12.055_bib73) 2018 Sultana (10.1016/j.aca.2018.12.055_bib182) 2012; 131 Tao (10.1016/j.aca.2018.12.055_bib108) 2015; 51 Beharry (10.1016/j.aca.2018.12.055_bib187) 2016; 138 Wu (10.1016/j.aca.2018.12.055_bib144) 2019; 277 Huang (10.1016/j.aca.2018.12.055_bib166) 2014; 86 Yao (10.1016/j.aca.2018.12.055_bib150) 2013; 181 Li (10.1016/j.aca.2018.12.055_bib46) 2018; 24 Zhou (10.1016/j.aca.2018.12.055_bib41) 2017; 117 Kankia (10.1016/j.aca.2018.12.055_bib92) 2011; 409 Zhang (10.1016/j.aca.2018.12.055_bib109) 2013; 85 Hu (10.1016/j.aca.2018.12.055_bib112) 2013; 42 Hosoya (10.1016/j.aca.2018.12.055_bib181) 2014; 105 Bath (10.1016/j.aca.2018.12.055_bib28) 2007; 2 Condie (10.1016/j.aca.2018.12.055_bib53) 2015; 10 Jiang (10.1016/j.aca.2018.12.055_bib184) 2005; 127 Liu (10.1016/j.aca.2018.12.055_bib63) 2005; 130 Wilson (10.1016/j.aca.2018.12.055_bib51) 2017; 13 Roy (10.1016/j.aca.2018.12.055_bib190) 2005; 102 Seidel (10.1016/j.aca.2018.12.055_bib61) 1996; 100 Lee (10.1016/j.aca.2018.12.055_bib162) 2017; 9 Huang (10.1016/j.aca.2018.12.055_bib174) 2011; 83 |
References_xml | – start-page: 4872 year: 2007 end-page: 4874 ident: bib127 article-title: Colorimetric Cu publication-title: Chem. Commun. contributor: fullname: Lu – volume: 87 start-page: 439 year: 2017 end-page: 446 ident: bib49 article-title: Simple and rapid chemiluminescence aptasensor for Hg publication-title: Biosens. Bioelectron. contributor: fullname: Li – volume: 50 start-page: 2935 year: 2014 end-page: 2938 ident: bib151 article-title: A rolling circle amplification-based DNA machine for miRNA screening coupling catalytic hairpin assembly with DNAzyme formation publication-title: Chem. Commun. contributor: fullname: Tang – volume: 105 start-page: 370 year: 2014 end-page: 388 ident: bib181 article-title: Targeting DNA damage response in cancer therapy publication-title: Cancer Sci. contributor: fullname: Miyagawa – volume: 22 start-page: 2108 year: 2017 ident: bib66 article-title: Recent advances in nucleic acid targeting probes and supramolecular constructs based on pyrene-modified oligonucleotides publication-title: Molecules contributor: fullname: Venyaminova – volume: 277 start-page: 273 year: 2019 end-page: 278 ident: bib144 article-title: Sensitive aptamer-based fluorescene assay for ochratoxin A based on RNase H signal amplification publication-title: Food Chem. contributor: fullname: Deng – volume: 49 start-page: 5665 year: 2010 end-page: 5667 ident: bib30 article-title: Selective dsDNA-templated formation of copper nanoparticles in solution publication-title: Angew. Chem. Int. Ed. contributor: fullname: Mokhir – volume: 5 start-page: 398 year: 2009 end-page: 410 ident: bib17 article-title: Inhibition of HIV-1 ribonuclease H activity by novel frangula-emodine derivatives publication-title: Med. Chem. contributor: fullname: Enzo – volume: 1 start-page: 223 year: 1994 end-page: 229 ident: bib120 article-title: A DNA enzyme that cleaves RNA publication-title: Chem. Biol. contributor: fullname: Joyce – volume: 46 start-page: 3271 year: 2010 end-page: 3273 ident: bib87 article-title: Pyrrolo-dC based fluorescent aptasensors for the molecular recognition of targets publication-title: Chem. Commun. contributor: fullname: Park – volume: 49 start-page: 7553 year: 2010 end-page: 7562 ident: bib133 article-title: Probing the function of nucleotides in the catalytic cores of the 8-17 and 10-23 DNAzymes by abasic nucleotide and C3 spacer substitutions publication-title: Biochemistry contributor: fullname: Xi – volume: 135 start-page: 13238 year: 2013 end-page: 13241 ident: bib58 article-title: Allosterically tunable, DNA-based switches triggered by heavy metals publication-title: J. Am. Chem. Soc. contributor: fullname: Ricci – volume: 51 start-page: 13373 year: 2015 end-page: 13376 ident: bib81 article-title: DNA-mediated supercharged fluorescent protein/graphene oxide interaction for label-free fluorescence assay of base excision repair enzyme activity publication-title: Chem. Commun. contributor: fullname: Yao – volume: 85 start-page: 8455 year: 2013 end-page: 8461 ident: bib109 article-title: DNA-templated silver nanoclusters for fluorescence turn-on assay of acetylcholinesterase activity publication-title: Anal. Chem. contributor: fullname: Qian – volume: 129 start-page: 10110 year: 2007 end-page: 10112 ident: bib80 article-title: Supercharging proteins can impart unusual resilience publication-title: J. Am. Chem. Soc. contributor: fullname: Liu – volume: 10 start-page: 3106 year: 2010 end-page: 3110 ident: bib114 article-title: A DNA-silver nanocluster probe that fluoresces upon hybridization publication-title: Nano Lett. contributor: fullname: Werner – volume: 137 start-page: 6829 year: 2015 end-page: 6836 ident: bib168 article-title: Electrostatic nucleic acid nanoassembly enables hybridization chain reaction in living cells for ultrasensitive mRNA imaging publication-title: J. Am. Chem. Soc. contributor: fullname: Jiang – volume: 94 start-page: 456 year: 2017 end-page: 463 ident: bib116 article-title: Dumbbell DNA-templated CuNPs as a nano-fluorescent probe for detection of enzymes involved in ligase-mediated DNA repair publication-title: Biosens. Bioelectron. contributor: fullname: Wang – volume: 181 start-page: 382 year: 2013 end-page: 387 ident: bib150 article-title: Sensitive and specific HBV genomic DNA detection using RCA-based QCM biosensor publication-title: Sensor. Actuator. B Chem. contributor: fullname: Fu – volume: 5 start-page: 564 year: 2005 end-page: 573 ident: bib6 article-title: Cancer in xeroderma pigmentosum and related disorders of DNA repair publication-title: Nat. Rev. Canc. contributor: fullname: Cleaver – volume: 9 start-page: 16149 year: 2017 end-page: 16153 ident: bib162 article-title: A label-free and enzyme-free signal amplification strategy for a sensitive RNase H activity assay publication-title: Nanoscale contributor: fullname: Park – volume: 4 start-page: 3781 year: 2013 end-page: 3795 ident: bib26 article-title: Luminescent oligonucleotide-based detection of enzymes involved with DNA repair publication-title: Chem. Sci. contributor: fullname: Ma – volume: 121 start-page: 8826 year: 2009 end-page: 8830 ident: bib70 article-title: Gold-nanoparticle-based multicolor nanobeacons for sequence-specific DNA analysis publication-title: Angew. Chem. Int. Ed. contributor: fullname: Fan – volume: 141 start-page: 96 year: 2016 end-page: 99 ident: bib169 article-title: A highly sensitive strategy for base excision repair enzyme activity detection based on graphene oxide mediated fluorescence quenching and hybridization chain reaction publication-title: Analyst contributor: fullname: Jiang – volume: 84 start-page: 5059 year: 2012 end-page: 5065 ident: bib60 article-title: In situ, real-time monitoring of the 3′ to 5′ exonucleases secreted by living cells publication-title: Anal. Chem. contributor: fullname: Zhao – volume: 89 start-page: 4488 year: 2017 end-page: 4494 ident: bib52 article-title: Excision repair-initiated enzyme-assisted bicyclic cascade signal amplification for ultrasensitive detection of uracil-DNA glycosylase publication-title: Anal. Chem. contributor: fullname: Zhang – volume: 949 start-page: 83 year: 2017 end-page: 88 ident: bib45 article-title: Coupling hybridization chain reaction with DNAzyme recycling for enzyme-free and dual amplified sensitive fluorescent detection of methyltransferase activity publication-title: Anal. Chim. Acta contributor: fullname: Xiang – volume: 991 start-page: 127 year: 2017 end-page: 132 ident: bib55 article-title: A label-free and highly sensitive strategy for uracil-DNA glycosylase activity detection based on stem-loop primer-mediated exponential amplification (SPEA) publication-title: Anal. Chim. Acta contributor: fullname: Jiang – volume: 9 start-page: 355 year: 2008 end-page: 359 ident: bib68 article-title: Light-switching excimer beacon assays for ribonuclease H kinetic study publication-title: Chembiochem contributor: fullname: Tan – volume: 47 start-page: 1201 year: 2011 end-page: 1203 ident: bib69 article-title: A graphene oxide-based nano-beacon for DNA phosphorylation analysis publication-title: Chem. Commun. contributor: fullname: Fan – volume: 277 start-page: 2725 year: 2002 end-page: 2731 ident: bib88 article-title: Promoter clearance by T7 RNA polymerase initial bubble collapse and transcript dissociation monitored by base analog fluorescence publication-title: J. Biol. Chem. contributor: fullname: Martin – volume: 48 start-page: 4549 year: 2012 end-page: 4551 ident: bib86 article-title: Mismatched pyrrolo-dC-modified duplex DNA as a novel probe for sensitive detection of silver ions publication-title: Chem. Commun. contributor: fullname: Park – volume: 48 start-page: 5316 year: 2009 end-page: 5321 ident: bib177 article-title: Fluorescence logic-signal-based multiplex detection of nucleases with the assembly of a cationic conjugated polymer and branched DNA publication-title: Angew. Chem. Int. Ed. contributor: fullname: Zhu – volume: 64 start-page: 505 year: 2015 end-page: 510 ident: bib152 article-title: A dumbell probe-mediated rolling circle amplification strategy for highly sensitive transcription factor detection publication-title: Biosens. Bioelectron. contributor: fullname: Deng – volume: 89 start-page: 7684 year: 2017 end-page: 7692 ident: bib176 article-title: Homogeneously sensitive detection of multiple DNA glycosylases with intrinsically fluorescent nucleotides publication-title: Anal. Chem. contributor: fullname: Zhang – volume: 4 start-page: 183 year: 2002 end-page: 194 ident: bib16 article-title: Uncovering the complexities of retroviral ribonuclease H reveals its potential as a therapeutic target publication-title: AIDS Rev. contributor: fullname: Le Grice – volume: 109 start-page: 1 year: 2018 end-page: 18 ident: bib103 article-title: Thioflavin T as a fluorescence probe for biosensing applications publication-title: TrAC Trends Anal. Chem. (Reference Ed.) contributor: fullname: Wang – volume: 122 start-page: 10466 year: 2000 end-page: 10467 ident: bib128 article-title: A highly sensitive and selective catalytic DNA biosensor for lead ions publication-title: J. Am. Chem. Soc. contributor: fullname: Lu – volume: 51 start-page: 9942 year: 2015 end-page: 9945 ident: bib141 article-title: Target DNA induced switches of DNA polymerase activity publication-title: Chem. Commun. contributor: fullname: Park – volume: 27 start-page: 883 year: 2006 end-page: 892 ident: bib4 article-title: DNA damage responses and their many interactions with the replication fork publication-title: Carcinogenesis contributor: fullname: D'andrea – volume: 44 start-page: 8636 year: 2015 end-page: 8663 ident: bib34 article-title: Metal nanoclusters: novel probes for diagnostic and therapeutic applications publication-title: Chem. Soc. Rev. contributor: fullname: Qu – volume: 28 start-page: 17 year: 2014 end-page: 24 ident: bib31 article-title: Technological applications arising from the interactions of DNA bases with metal ions publication-title: Curr. Opin. Biotechnol. contributor: fullname: Park – volume: 30 start-page: 2 year: 2008 end-page: 10 ident: bib8 article-title: Base excision repair of oxidative DNA damage and association with cancer and aging publication-title: Carcinogenesis contributor: fullname: Bohr – volume: 107 start-page: 3715 year: 2007 end-page: 3743 ident: bib132 article-title: Functional aptamers and aptazymes in biotechnology, diagnostics, and therapy publication-title: Chem. Rev. contributor: fullname: Mayer – volume: 51 start-page: 1689 year: 2012 end-page: 1692 ident: bib188 article-title: Direct fluorescence monitoring of DNA base excision repair publication-title: Angew. Chem. Int. Ed. contributor: fullname: Kool – volume: 50 start-page: 295 year: 2011 end-page: 299 ident: bib130 article-title: Amplified detection of DNA through an autocatalytic and catabolic DNAzyme-mediated process publication-title: Angew. Chem. Int. Ed. contributor: fullname: Willner – volume: 8 year: 2013 ident: bib179 article-title: Inhibition of DNA glycosylases via small molecule purine analogs publication-title: PLoS One contributor: fullname: Lloyd – volume: 98 start-page: 210 year: 2017 end-page: 214 ident: bib85 article-title: Pyrrolo-dC modified duplex DNA as a novel probe for the sensitive assay of base excision repair enzyme activity publication-title: Biosens. Bioelectron. contributor: fullname: Park – start-page: 4342 year: 2007 end-page: 4344 ident: bib76 article-title: Specific and sensitive detection of nucleic acids and RNases using gold nanoparticle-RNA-fluorescent dye conjugates publication-title: Chem. Commun. contributor: fullname: Reich – volume: 85 start-page: 4321 year: 2013 end-page: 4327 ident: bib83 article-title: Chimeric RNA–DNA molecular beacons for quantification of nucleic acids, single nucleotide polymophisms, and nucleic acid damage publication-title: Anal. Chem. contributor: fullname: Loppnow – volume: 86 start-page: 6758 year: 2014 end-page: 6762 ident: bib94 article-title: Label-free fluorescence strategy for sensitive detection of adenosine triphosphate using a loop DNA probe with low background noise publication-title: Anal. Chem. contributor: fullname: Chen – volume: 68 start-page: 736 year: 2015 end-page: 740 ident: bib111 article-title: DNA methyltransferase activity detection based on fluorescent silver nanocluster hairpin-shaped DNA probe with 5’-C-rich/G-rich-3’ tails publication-title: Biosens. Bioelectron. contributor: fullname: Zhou – volume: 42 start-page: 31 year: 2013 end-page: 35 ident: bib112 article-title: Double-strand DNA-templated formation of copper nanoparticles as fluorescent probe for label free nuclease enzymedetection publication-title: Biosens. Bioelectron. contributor: fullname: Yu – volume: 16 start-page: 2605 year: 2010 end-page: 2610 ident: bib100 article-title: A quadruplex-based, label-free, and real-time fluorescence assay for RNase H activity and inhibition publication-title: Chem. Eur J. contributor: fullname: Qu – volume: 101 start-page: 15275 year: 2004 end-page: 15278 ident: bib164 article-title: Triggered amplification by hybridization chain reaction publication-title: Proc. Natl. Acad. Sci. U.S.A. contributor: fullname: Pierce – volume: 366 start-page: 237 year: 2007 end-page: 243 ident: bib82 article-title: Real-time monitoring of uracil removal by uracil–DNA glycosylase using fluorescent resonance energy transfer probes publication-title: Anal. Biochem. contributor: fullname: Tang – volume: 65 start-page: 103 year: 2015 end-page: 107 ident: bib95 article-title: Labeling-free fluorescent detection of DNA hybridization through FRET from pyrene excimer to DNA intercalator SYBR green I publication-title: Biosens. Bioelectron. contributor: fullname: Wang – volume: 106 start-page: 927 year: 2002 end-page: 932 ident: bib21 article-title: Elevated levels of oxidative DNA damage and DNA repair enzymes in human atherosclerotic plaques publication-title: Circulation contributor: fullname: Kockx – volume: 100 start-page: 5541 year: 1996 end-page: 5553 ident: bib61 article-title: Nucleobase-specific quenching of fluorescent dyes. 1. Nucleobase one-electron redox potentials and their correlation with static and dynamic quenching efficiencies publication-title: J. Phys. Chem. contributor: fullname: Sauer – volume: 99 start-page: 451 year: 2008 end-page: 458 ident: bib9 article-title: DNA repair dysfunction in gastrointestinal tract cancers publication-title: Cancer Sci. contributor: fullname: Tsuzuki – volume: 130 start-page: 5038 year: 2008 end-page: 5039 ident: bib33 article-title: Oligonucleotide-stabilized Ag nanocluster fluorophores publication-title: J. Am. Chem. Soc. contributor: fullname: Dickson – volume: 42 start-page: 193 year: 2013 end-page: 197 ident: bib93 article-title: A universal and label-free aptasensor for fluorescent detection of ATP and thrombin based on SYBR Green I dye publication-title: Biosens. Bioelectron. contributor: fullname: Chai – volume: 9 start-page: 144 year: 2010 end-page: 152 ident: bib59 article-title: Use of a molecular beacon to track the activity of base excision repair protein OGG1 in live cells publication-title: DNA Repair contributor: fullname: Hodges – volume: 130 start-page: 336 year: 2008 end-page: 342 ident: bib161 article-title: Pyrene excimer signaling molecular beacons for probing nucleic acids publication-title: J. Am. Chem. Soc. contributor: fullname: Turro – volume: 63 start-page: 3427 year: 2007 end-page: 3433 ident: bib192 article-title: Oligodeoxyfluorosides: strong sequence dependence of fluorescence emission publication-title: Tetrahedron contributor: fullname: Kool – volume: 126 start-page: 8498 year: 2014 end-page: 8502 ident: bib79 article-title: A supercharged fluorescent protein as a versatile probe for homogeneous DNA detection and methylation analysis publication-title: Angew. Chem. Int. Ed. contributor: fullname: Yao – volume: 84 start-page: 9981 year: 2012 end-page: 9987 ident: bib44 article-title: Expanding targets of DNAzyme-based sensors through deactivation and activation of DNAzymes by single uracil removal: sensitive fluorescent assay of uracil-DNA glycosylase publication-title: Anal. Chem. contributor: fullname: Lu – volume: 272 start-page: 645 year: 1997 end-page: 664 ident: bib47 article-title: Structure, recognition and adaptive binding in RNA aptamer complexes publication-title: J. Mol. Biol. contributor: fullname: Nonin – volume: 13 year: 2017 ident: bib148 article-title: Abasic site-assisted inhibition of nicking endonuclease activity for the sensitive determination of uracil DNA glycosylase publication-title: Biotechnol. J. contributor: fullname: Park – volume: 125 start-page: 7168 year: 2003 end-page: 7169 ident: bib189 article-title: Bioconjugated nanoparticles for DNA protection from cleavage publication-title: J. Am. Chem. Soc. contributor: fullname: Li – volume: 50 start-page: 3751 year: 2011 end-page: 3754 ident: bib131 article-title: Fluorogenic DNAzyme probes as bacterial indicators publication-title: Angew. Chem. Int. Ed. contributor: fullname: Li – volume: 109 start-page: 1948 year: 2009 end-page: 1998 ident: bib27 article-title: Functional nucleic acid sensors publication-title: Chem. Rev. contributor: fullname: Lu – volume: 45 start-page: e45 year: 2016 ident: bib186 article-title: A specific DNA-nanoprobe for tracking the activities of human apurinic/apyrimidinic endonuclease 1 in living cells publication-title: Nucleic Acids Res. contributor: fullname: Zhao – volume: 138 start-page: 3647 year: 2016 end-page: 3650 ident: bib187 article-title: Fluorescence monitoring of the oxidative repair of DNA alkylation damage by ALKBH3, a prostate cancer marker publication-title: J. Am. Chem. Soc. contributor: fullname: Kool – volume: 8 start-page: 4319 year: 2016 end-page: 4323 ident: bib113 article-title: Simple and sensitive detection of uracil-DNA glycosylase activity using dsDNA-templated copper nanoclusters as fluorescent probes publication-title: Anal. Methods contributor: fullname: Li – volume: 17 start-page: 4680 year: 2011 end-page: 4698 ident: bib121 article-title: Bioinspired catalyst design and artificial metalloenzymes publication-title: Chem. Eur J. contributor: fullname: Kamer – volume: 43 start-page: 159 year: 2010 end-page: 183 ident: bib89 article-title: Fluorescent nucleic acid base analogues publication-title: Q. Rev. Biophys. contributor: fullname: Wilhelmsson – volume: 68 start-page: 228 year: 2003 end-page: 235 ident: bib138 article-title: Influence of DNA aptamer structure on the specificity of binding to publication-title: Biochemistry (Mosc.) contributor: fullname: Lunin – volume: 41 start-page: 220 year: 2012 end-page: 228 ident: bib91 article-title: Quadruplex formation as a molecular switch to turn on intrinsically fluorescent nucleotide analogs publication-title: Nucleic Acids Res. contributor: fullname: Kankia – volume: 102 start-page: 179 year: 2017 end-page: 188 ident: bib135 article-title: Nucleic acid aptamer-based methods for diagnosis of infections publication-title: Biosens. Bioelectron. contributor: fullname: Park – volume: 12 start-page: 620 year: 2013 end-page: 636 ident: bib12 article-title: DNA repair mechanisms in dividing and non-dividing cells publication-title: DNA Repair contributor: fullname: Wilson – volume: 14 start-page: 303 year: 1996 end-page: 308 ident: bib56 article-title: Molecular beacons: probes that fluoresce upon hybridization publication-title: Nat. Biotechnol. contributor: fullname: Kramer – volume: 10 start-page: 272 year: 2006 end-page: 281 ident: bib40 article-title: Nucleic acid aptamers and enzymes as sensors publication-title: Curr. Opin. Chem. Biol. contributor: fullname: Li – volume: 4 start-page: 105 year: 2011 end-page: 128 ident: bib39 article-title: Metal ion sensors based on DNAzymes and related DNA molecules publication-title: Annu. Rev. Anal. Chem. contributor: fullname: Lu – volume: 185 start-page: 53 year: 2018 ident: bib154 article-title: Determination of RNase H activity via real-time monitoring of target-triggered rolling circle amplification publication-title: Microchim. Acta contributor: fullname: Park – volume: 92 start-page: 4641 year: 1995 end-page: 4645 ident: bib149 article-title: Rolling replication of short DNA circles publication-title: Proc. Natl. Acad. Sci. U.S.A. contributor: fullname: Xu – volume: 2 start-page: 275 year: 2007 end-page: 284 ident: bib28 article-title: DNA nanomachines publication-title: Nat. Nanotechnol. contributor: fullname: Turberfield – volume: 51 start-page: 929 year: 2015 end-page: 932 ident: bib108 article-title: A label-free and sensitive fluorescent method for the detection of uracil-DNA glycosylase activity publication-title: Chem. Commun. contributor: fullname: Xiang – volume: 3 start-page: 103 year: 2011 end-page: 113 ident: bib157 article-title: Dynamic DNA nanotechnology using strand-displacement reactions publication-title: Nat. Chem. contributor: fullname: Seelig – volume: 51 start-page: 13744 year: 2015 end-page: 13747 ident: bib84 article-title: A fluorescent G-quadruplex probe for the assay of base excision repair enzyme activity publication-title: Chem. Commun. contributor: fullname: Park – volume: 53 start-page: 12878 year: 2017 end-page: 12881 ident: bib172 article-title: A C-HCR assembly of branched DNA nanostructures for amplified uracil-DNA glycosylase assays publication-title: Chem. Commun. contributor: fullname: Wang – volume: 50 start-page: 11879 year: 2014 end-page: 11882 ident: bib167 article-title: A novel graphene oxide based fluorescent nanosensing strategy with hybridization chain reaction signal amplification for highly sensitive biothiol detection publication-title: Chem. Commun. contributor: fullname: Chu – volume: 49 start-page: 5630 year: 2013 end-page: 5632 ident: bib99 article-title: Detection of base excision repair enzyme activity using a luminescent G-quadruplex selective switch-on probe publication-title: Chem. Commun. contributor: fullname: Ma – volume: 50 start-page: 2273 year: 2017 end-page: 2283 ident: bib123 article-title: Discovery and biosensing applications of diverse RNA-cleaving DNAzymes publication-title: Acc. Chem. Res. contributor: fullname: Li – volume: 58 start-page: 81 year: 2014 end-page: 84 ident: bib175 article-title: A multiplex assay based on encoded microbeads conjugated to DNA NanoBeacons to monitor base excision repair activities by flow cytometry publication-title: Biosens. Bioelectron. contributor: fullname: Gasparutto – volume: 127 start-page: 17412 year: 2005 end-page: 17420 ident: bib184 article-title: Uracil-directed ligand tethering: an efficient strategy for uracil DNA glycosylase (UNG) inhibitor development publication-title: J. Am. Chem. Soc. contributor: fullname: Stivers – volume: 68 start-page: 654 year: 2015 end-page: 659 ident: bib163 article-title: A DNA machine-based fluorescence amplification strategy for sensitive detection of uracil-DNA glycosylase activity publication-title: Biosens. Bioelectron. contributor: fullname: Jiang – volume: 10 year: 2015 ident: bib53 article-title: A fluorescent probe to measure DNA damage and repair publication-title: PLoS One contributor: fullname: Wang – volume: 8 start-page: 8202 year: 2016 end-page: 8209 ident: bib71 article-title: A cobalt oxyhydroxide nanoflake-based nanoprobe for the sensitive fluorescence detection of T4 polynucleotide kinase activity and inhibition publication-title: Nanoscale contributor: fullname: Chu – volume: 10 start-page: 2334 year: 2015 end-page: 2343 ident: bib178 article-title: Small molecule inhibitors of 8-oxoguanine DNA glycosylase-1 (OGG1) publication-title: ACS Chem. Biol. contributor: fullname: Lloyd – volume: 18 start-page: 240 year: 2006 end-page: 246 ident: bib5 article-title: DNA damage repair: anytime, anywhere? publication-title: Curr. Opin. Cell Biol. contributor: fullname: Houtsmuller – volume: 131 start-page: 2433 year: 2012 end-page: 2444 ident: bib182 article-title: Synthetic lethal targeting of DNA double-strand break repair deficient cells by human apurinic/apyrimidinic endonuclease inhibitors publication-title: Int. J. Canc. contributor: fullname: Patel – volume: 39 year: 2011 ident: bib156 article-title: Rational, modular adaptation of enzyme-free DNA circuits to multiple detection methods publication-title: Nucleic Acids Res. contributor: fullname: Chen – volume: 11 start-page: 1336 year: 2010 end-page: 1340 ident: bib14 article-title: Targeting synthetic lethality in DNA damage repair pathways as an anti-cancer strategy publication-title: Curr. Drug Targets contributor: fullname: Pasqualini – volume: 137 start-page: 1713 year: 2012 end-page: 1717 ident: bib97 article-title: Label-free fluorescent assay for real-time monitoring site-specific DNA cleavage by EcoRI endonuclease publication-title: Analyst contributor: fullname: Wang – volume: 284 start-page: 29725 year: 2009 end-page: 29734 ident: bib23 article-title: Aryl hydrocarbon receptor facilitates DNA strand breaks and 8-oxo-2′-deoxyguanosine formation by the aldo-keto reductase product benzo [a] pyrene-7, 8-dione publication-title: J. Biol. Chem. contributor: fullname: Penning – volume: 83 start-page: 8913 year: 2011 end-page: 8918 ident: bib174 article-title: Intermolecular and intramolecular quencher based quantum dot nanoprobes for multiplexed detection of endonuclease activity and inhibition publication-title: Anal. Chem. contributor: fullname: Liang – volume: 17 start-page: 479 year: 2005 end-page: 490 ident: bib15 article-title: HIV-1-associated uracil DNA glycosylase activity controls dUTP misincorporation in viral DNA and is essential to the HIV-1 life cycle publication-title: Mol. Cell. contributor: fullname: Sire – volume: 28 start-page: 433 year: 2013 end-page: 440 ident: bib24 article-title: Effect of hOGG1 over-expression on cisplatin resistance in esophageal squamous carcinoma cells publication-title: Cancer Biother. Radiopharm. contributor: fullname: Hong – volume: 52 start-page: 9719 year: 2013 end-page: 9722 ident: bib29 article-title: Poly (thymine)-templated selective formation of fluorescent copper nanoparticles publication-title: Angew. Chem. Int. Ed. contributor: fullname: Yang – volume: 80 start-page: 91 year: 2016 end-page: 97 ident: bib159 article-title: Cyclic up-regulation fluorescence of pyrene excimer for studying polynucleotide kinase activity based on dual amplification publication-title: Biosens. Bioelectron. contributor: fullname: Jin – volume: 25 start-page: 463 year: 2010 end-page: 471 ident: bib10 article-title: Oxidative stress and 8-oxoguanine repair are enhanced in colon adenoma and carcinoma patients publication-title: Mutagenesis contributor: fullname: Jawien – volume: 280 start-page: 1066 year: 1998 end-page: 1069 ident: bib22 article-title: Inducible repair of thymine glycol detected by an ultrasensitive assay for DNA damage publication-title: Science contributor: fullname: Weinfeld – volume: 4 start-page: 2606 year: 2018 end-page: 2613 ident: bib36 article-title: A smart magnetic nanoaptamer: construction, subcellular distribution and silencing HIF for cancer gene therapy publication-title: ACS Biomater. Sci. Eng. contributor: fullname: Gao – volume: 406 start-page: 605 year: 2000 end-page: 608 ident: bib158 article-title: A DNA-fuelled molecular machine made of DNA publication-title: Nature contributor: fullname: Neumann – volume: 403 start-page: 859 year: 2000 end-page: 866 ident: bib11 article-title: Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA publication-title: Nature contributor: fullname: Verdine – volume: 130 start-page: 350 year: 2005 end-page: 357 ident: bib63 article-title: Using molecular beacon to monitor activity of publication-title: Analyst contributor: fullname: Ma – volume: 131 start-page: 116 year: 2015 end-page: 120 ident: bib115 article-title: A new label-free and turn-on strategy for endonuclease detection using a DNA-silver nanocluster probe publication-title: Talanta contributor: fullname: Chu – volume: 409 start-page: 59 year: 2011 end-page: 65 ident: bib92 article-title: Self-dissociative primers for nucleic acid amplification and detection based on DNA quadruplexes with intrinsic fluorescence publication-title: Anal. Biochem. contributor: fullname: Kankia – volume: 264 start-page: 268 year: 1996 end-page: 278 ident: bib136 article-title: Oligonucleotide inhibitors of publication-title: J. Mol. Biol. contributor: fullname: Jayasena – volume: 104 start-page: 12616 year: 2007 end-page: 12621 ident: bib32 article-title: Strongly emissive individual DNA-encapsulated Ag nanoclusters as single-molecule fluorophores publication-title: Proc. Natl. Acad. Sci. U.S.A. contributor: fullname: Dickson – volume: 518 start-page: 35 year: 2017 end-page: 45 ident: bib50 article-title: Aptamer-based electrochemical biosensor by using Au-Pt nanoparticles, carbon nanotubes and acriflavine platform publication-title: Anal. Biochem. contributor: fullname: Azadbakht – year: 2018 ident: bib73 article-title: ExoAPP: exosome-oriented, aptamer nanoprobe-enabled surface proteins profiling and detection publication-title: Anal. Chem. contributor: fullname: Zhang – volume: 18 start-page: 833 year: 2011 end-page: 838 ident: bib78 article-title: A class of human proteins that deliver functional proteins into mammalian cells in vitro and in vivo publication-title: Chem. Biol. contributor: fullname: Kung – volume: 88 start-page: 48 year: 2017 end-page: 54 ident: bib142 article-title: Aptamer-mediated universal enzyme assay based on target-triggered DNA polymerase activity publication-title: Biosens. Bioelectron. contributor: fullname: Park – volume: 344 start-page: 467 year: 1990 end-page: 468 ident: bib119 article-title: Selection publication-title: Nature contributor: fullname: Joyce – volume: 49 start-page: 5498 year: 2010 end-page: 5501 ident: bib143 article-title: Ultrasensitive detection of microRNAs by exponential isothermal amplification publication-title: Angew. Chem. Int. Ed. contributor: fullname: Cheng – volume: 86 start-page: 336 year: 2013 end-page: 339 ident: bib145 article-title: Exponential strand-displacement amplification for detection of microRNAs publication-title: Anal. Chem. contributor: fullname: Zhong – volume: 32 start-page: 8284 year: 1993 end-page: 8290 ident: bib18 article-title: Evidence for an imino intermediate in the T4 endonuclease V reaction publication-title: Biochemistry contributor: fullname: Lloyd – volume: 53 start-page: 10596 year: 2017 end-page: 10599 ident: bib67 article-title: Sensitive detection of microRNAs by duplex specific nuclease-assisted target recycling and pyrene excimer switching publication-title: Chem. Commun. contributor: fullname: Zhang – volume: 25 start-page: 301 year: 2009 end-page: 305 ident: bib62 article-title: Singly labeled smart probes for real-time monitoring of the kinetics of dNTP misincorporation and single nucleotide extension in DNA intra-molecular polymerization publication-title: Biosens. Bioelectron. contributor: fullname: Zhao – volume: 408 start-page: 3275 year: 2016 end-page: 3280 ident: bib101 article-title: Label-free molecular beacon for real-time monitoring of DNA polymerase activity publication-title: Anal. Bioanal. Chem. contributor: fullname: Wang – volume: 408 start-page: 4311 year: 2016 end-page: 4318 ident: bib110 article-title: Rapid restriction enzyme free detection of DNA methyltransferase activity based on DNA-templated silver nanoclusters publication-title: Anal. Bioanal. Chem. contributor: fullname: Ganjali – volume: 8 start-page: 1662 year: 2007 end-page: 1666 ident: bib139 article-title: Controlling DNA polymerization with a switchable aptamer publication-title: Chembiochem contributor: fullname: Simmel – volume: 32 start-page: 659 year: 2012 end-page: 683 ident: bib19 article-title: Recognition of damaged DNA: structure and dynamic markers publication-title: Med. Res. Rev. contributor: fullname: Spring – volume: 57 start-page: 7051 year: 2018 end-page: 7055 ident: bib38 article-title: Bottom-up synthesis and self-assembly of copper clusters into permanent excimer supramolecular nanostructures publication-title: Angew. Chem. Int. Ed. contributor: fullname: Brovelli – volume: 6 start-page: 3692 year: 2015 end-page: 3696 ident: bib122 article-title: A general approach to the design of allosteric, transcription factor-regulated DNAzymes publication-title: Chem. Sci. contributor: fullname: Ricci – volume: 117 start-page: 8272 year: 2017 end-page: 8325 ident: bib41 article-title: Metal sensing by DNA publication-title: Chem. Rev. contributor: fullname: Liu – volume: 26 start-page: 2431 year: 2011 end-page: 2435 ident: bib118 article-title: One-pot synthesis of fluorescent oligonucleotide Ag nanoclusters for specific and sensitive detection of DNA publication-title: Biosens. Bioelectron. contributor: fullname: Chang – volume: 451 start-page: 318 year: 2008 end-page: 322 ident: bib155 article-title: Programming biomolecular self-assembly pathways publication-title: Nature contributor: fullname: Pierce – volume: 7 start-page: 301 year: 2016 end-page: 307 ident: bib185 article-title: Protein sensing in living cells by molecular rotor-based fluorescence-switchable chemical probes publication-title: Chem. Sci. contributor: fullname: Tan – volume: 10 start-page: 4607 year: 2018 end-page: 4641 ident: bib42 article-title: Programmable DNA switches and their applications publication-title: Nanoscale contributor: fullname: Vallée-Bélisle – volume: 11 start-page: 57 year: 2004 end-page: 67 ident: bib134 article-title: Dinucleotide junction cleavage versatility of 8-17 deoxyribozyme publication-title: Chem. Biol. contributor: fullname: Li – volume: 24 start-page: 14500 year: 2018 end-page: 14505 ident: bib46 article-title: A DNA as a substrate and an enzyme: direct profiling of methyltransferase activity by cytosine methylation of a DNAzyme publication-title: Chem. Eur J. contributor: fullname: Liu – volume: 41 start-page: 359 year: 2013 end-page: 365 ident: bib74 article-title: Graphene oxide-hairpin probe nanocomposite as a homogeneous assay platform for DNA base excision repair screening publication-title: Biosens. Bioelectron. contributor: fullname: Jiang – volume: 140 start-page: 6124 year: 2015 end-page: 6130 ident: bib171 article-title: A label-free cyclic assembly of G-quadruplex nanowires for cascade amplification detection of T4 polynucleotide kinase activity and inhibition publication-title: Analyst contributor: fullname: Jin – volume: 6 start-page: 74 year: 2013 ident: bib25 article-title: The significance of the alteration of 8-OHdG in serous ovarian carcinoma publication-title: J. Ovarian Res. contributor: fullname: Liu – volume: 151 start-page: 22 year: 2015 end-page: 26 ident: bib96 article-title: Label-free fluorescence strategy for sensitive detection of exonuclease activity using SYBR Green I as probe publication-title: Spectrochim. Acta contributor: fullname: Li – volume: 47 start-page: 4346 year: 2008 end-page: 4350 ident: bib125 article-title: A highly selective DNAzyme sensor for mercuric ions publication-title: Angew. Chem. Int. Ed. contributor: fullname: Perrin – volume: 131 start-page: 10320 year: 2009 end-page: 10333 ident: bib129 article-title: Colorimetric split G-quadruplex probes for nucleic acid sensing: improving reconstituted DNAzyme's catalytic efficiency via probe remodeling publication-title: J. Am. Chem. Soc. contributor: fullname: Sintim – volume: 4 start-page: 329 year: 1997 end-page: 334 ident: bib3 article-title: How do DNA repair proteins locate damaged bases in the genome? publication-title: Chem. Biol. contributor: fullname: Bruner – volume: 69 start-page: 3271 year: 2004 end-page: 3275 ident: bib64 article-title: Unambiguous detection of target DNAs by excimer−monomer switching molecular beacons publication-title: J. Org. Chem. contributor: fullname: Inouye – volume: 86 start-page: 4934 year: 2014 end-page: 4939 ident: bib65 article-title: Target-catalyzed dynamic assembly-based pyrene excimer switching for enzyme-free nucleic acid amplified detection publication-title: Anal. Chem. contributor: fullname: He – start-page: 1569 year: 2008 end-page: 1571 ident: bib126 article-title: A DNAzyme cascade for the amplified detection of Pb publication-title: Chem. Commun. contributor: fullname: Willner – volume: 7 start-page: 47143 year: 2017 end-page: 47147 ident: bib147 article-title: Rapid and label-free strategy for the sensitive detection of Hg publication-title: RSC Adv. contributor: fullname: Park – volume: 141 start-page: 1789 year: 2016 end-page: 1795 ident: bib153 article-title: A unique dual recognition hairpin probe mediated fluorescence amplification method for sensitive detection of uracil-DNA glycosylase and endonuclease IV activities publication-title: Analyst contributor: fullname: Jiang – volume: 25 year: 2014 ident: bib117 article-title: Effect of salts, solvents and buffer on miRNA detection using DNA silver nanocluster (DNA/AgNCs) probes publication-title: Nanotechnology contributor: fullname: Yang – volume: 89 start-page: 11014 year: 2017 end-page: 11020 ident: bib43 article-title: Fluorescence assay for ribonuclease H based on nonlabeled substrate and DNAzyme assisted cascade amplification publication-title: Anal. Chem. contributor: fullname: Tong – year: 2015 ident: bib48 article-title: Single-stranded DNA aptamers against pathogens and toxins: identification and biosensing applications publication-title: BioMed Res. Int. contributor: fullname: Sooter – volume: 411 start-page: 366 year: 2001 end-page: 374 ident: bib7 article-title: Genome maintenance mechanisms for preventing cancer publication-title: Nature contributor: fullname: Hoeijmakers – volume: 40 start-page: 179 year: 2010 end-page: 204 ident: bib2 article-title: The DNA damage response: making it safe to play with knives publication-title: Mol. Cell. contributor: fullname: Elledge – volume: 83 start-page: 463 year: 2010 end-page: 466 ident: bib98 article-title: Simple and convenient G-quadruplex-based turn-on fluorescence assay for 3′→5′ exonuclease activity publication-title: Anal. Chem. contributor: fullname: Ma – volume: 140 start-page: 5450 year: 2015 end-page: 5453 ident: bib105 article-title: Label-free fluorescence light-up detection of T4 polynucleotide kinase activity using the split-to-intact G-quadruplex strategy by ligation-triggered and toehold-mediated strand displacement release publication-title: Analyst contributor: fullname: Pei – volume: 6 start-page: 6866 year: 2014 end-page: 6872 ident: bib77 article-title: A WS publication-title: Nanoscale contributor: fullname: Chu – volume: 262 start-page: 1001 year: 2018 end-page: 1005 ident: bib146 article-title: A simple, sensitive, and label-free assay for alkaline phosphatase activity based on target-promoted exponential strand displacement amplification publication-title: Sensor. Actuator. B Chem. contributor: fullname: Park – volume: 86 start-page: 3209 year: 2014 end-page: 3215 ident: bib166 article-title: Graphene oxide-based amplified fluorescent biosensor for Hg publication-title: Anal. Chem. contributor: fullname: Li – volume: 47 start-page: 4017 year: 2018 end-page: 4072 ident: bib37 article-title: DNA metallization: principles, methods, structures, and applications publication-title: Chem. Soc. Rev. contributor: fullname: Qu – volume: 13 start-page: 1721 year: 2017 end-page: 1733 ident: bib51 article-title: Fluorescent probes of DNA repair publication-title: ACS Chem. Biol. contributor: fullname: Kool – volume: 126 start-page: 5207 year: 2004 end-page: 5212 ident: bib35 article-title: DNA-templated Ag nanocluster formation publication-title: J. Am. Chem. Soc. contributor: fullname: Dickson – volume: 90 start-page: 103 year: 2017 end-page: 109 ident: bib75 article-title: An end-point method based on graphene oxide for RNase H analysis and inhibitors screening publication-title: Biosens. Bioelectron. contributor: fullname: Liu – volume: 63 start-page: 3585 year: 2007 end-page: 3590 ident: bib90 article-title: Monitoring G-quadruplex structures and G-quadruplex-ligand complex using 2-aminopurine modified oligonucleotides publication-title: Tetrahedron contributor: fullname: Majima – volume: 555 start-page: 55 year: 2018 end-page: 58 ident: bib104 article-title: Label-free detection of exonuclease III activity and its inhibition based on DNA hairpin probe publication-title: Anal. Biochem. contributor: fullname: Chen – volume: 17 start-page: 235 year: 2010 end-page: 248 ident: bib183 article-title: DNA polymerases as potential therapeutic targets for cancers deficient in the DNA mismatch repair proteins MSH2 or MLH1 publication-title: Cancer Cell contributor: fullname: Ashworth – volume: 140 start-page: 3500 year: 2015 end-page: 3506 ident: bib170 article-title: Enzyme-free and label-free signal amplification for monitoring endonuclease activity and inhibition via hybridization chain reaction publication-title: Analyst contributor: fullname: Jin – volume: 98 start-page: 1221 year: 1998 end-page: 1262 ident: bib13 article-title: Chemistry of glycosylases and endonucleases involved in base-excision repair publication-title: Chem. Rev. contributor: fullname: Williams – volume: 50 start-page: 5313 year: 2014 end-page: 5315 ident: bib107 article-title: Label-free luminescence switch-on detection of T4 polynucleotide kinase activity using a G-quadruplex-selective probe publication-title: Chem. Commun. contributor: fullname: Ma – volume: 141 start-page: 6208 year: 2016 end-page: 6216 ident: bib173 article-title: A DNA array based on clickable lesion-containing hairpin probes for multiplexed detection of base excision repair activities publication-title: Analyst contributor: fullname: Gasparutto – volume: 102 start-page: 11539 year: 2005 end-page: 11544 ident: bib191 article-title: Organically modified silica nanoparticles: a nonviral vector for publication-title: Proc. Natl. Acad. Sci. U.S.A. contributor: fullname: Stachowiak – volume: 362 start-page: 709 year: 1993 end-page: 715 ident: bib1 article-title: Instability and decay of the primary structure of DNA publication-title: Nature contributor: fullname: Lindahl – volume: 12 start-page: 801 year: 2012 end-page: 817 ident: bib180 article-title: DNA repair dysregulation from cancer driver to therapeutic target publication-title: Nat. Rev. Canc. contributor: fullname: Curtin – volume: 9 start-page: 3055 year: 2017 end-page: 3060 ident: bib106 article-title: Label-free fluorescence assay for rapid detection of RNase H activity based on Tb publication-title: Anal. Methods contributor: fullname: Wang – volume: 87 start-page: 6470 year: 2015 end-page: 6474 ident: bib165 article-title: Structure-switching aptamer triggering hybridization chain reaction on the cell surface for activatable theranostics publication-title: Anal. Chem. contributor: fullname: Chu – volume: 53 start-page: 3878 year: 2017 end-page: 3881 ident: bib54 article-title: Cyclic enzymatic repairing-mediated dual-signal amplification for real-time monitoring of thymine DNA glycosylase publication-title: Chem. Commun. contributor: fullname: Zhang – volume: 95 start-page: 288 year: 1998 end-page: 293 ident: bib20 article-title: DNA oxidation matters: the HPLC-electrochemical detection assay of 8-oxo-deoxyguanosine and 8-oxo-guanine publication-title: Proc. Natl. Acad. Sci. U.S.A. contributor: fullname: Ames – volume: 23 start-page: 17379 year: 2017 end-page: 17383 ident: bib124 article-title: Enzyme-free colorimetric detection of Cu publication-title: Chem. Eur J. contributor: fullname: Park – volume: 271 start-page: 100 year: 1997 end-page: 111 ident: bib137 article-title: Inhibition of multiple thermostable DNA polymerases by a heterodimeric aptamer publication-title: J. Mol. Biol. contributor: fullname: Jayasena – volume: 134 start-page: 20601 year: 2012 end-page: 20604 ident: bib57 article-title: Using distal-site mutations and allosteric inhibition to tune, extend, and narrow the useful dynamic range of aptamer-based sensors publication-title: J. Am. Chem. Soc. contributor: fullname: Ricci – volume: 50 start-page: 401 year: 2011 end-page: 404 ident: bib160 article-title: Pyrene-excimer probes based on the hybridization chain reaction for the detection of nucleic acids in complex biological fluids publication-title: Angew. Chem. Int. Ed. contributor: fullname: Tan – volume: 127 start-page: 11348 year: 2005 end-page: 11351 ident: bib140 article-title: Boolean control of aptamer binding states publication-title: J. Am. Chem. Soc. contributor: fullname: Stojanovic – volume: 102 start-page: 279 year: 2005 end-page: 284 ident: bib190 article-title: Optical tracking of organically modified silica nanoparticles as DNA carriers: a nonviral, nanomedicine approach for gene delivery publication-title: Proc. Natl. Acad. Sci. U.S.A. contributor: fullname: Prasad – volume: 51 start-page: 15940 year: 2015 end-page: 15943 ident: bib72 article-title: Enzyme-free and DNA-based multiplexer and demultiplexer publication-title: Chem. Commun. contributor: fullname: Wang – volume: 182 start-page: 142 year: 2018 end-page: 147 ident: bib102 article-title: Label-free and nicking enzyme-assisted fluorescence signal amplification for RNase H determination based on a G-quadruplexe/thioflavin T complex publication-title: Talanta contributor: fullname: Wang – volume: 135 start-page: 13238 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib58 article-title: Allosterically tunable, DNA-based switches triggered by heavy metals publication-title: J. Am. Chem. Soc. doi: 10.1021/ja404653q contributor: fullname: Porchetta – volume: 88 start-page: 48 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib142 article-title: Aptamer-mediated universal enzyme assay based on target-triggered DNA polymerase activity publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2016.07.038 contributor: fullname: Park – volume: 84 start-page: 9981 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib44 article-title: Expanding targets of DNAzyme-based sensors through deactivation and activation of DNAzymes by single uracil removal: sensitive fluorescent assay of uracil-DNA glycosylase publication-title: Anal. Chem. doi: 10.1021/ac302424f contributor: fullname: Xiang – volume: 58 start-page: 81 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib175 article-title: A multiplex assay based on encoded microbeads conjugated to DNA NanoBeacons to monitor base excision repair activities by flow cytometry publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2014.02.040 contributor: fullname: Gines – volume: 39 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib156 article-title: Rational, modular adaptation of enzyme-free DNA circuits to multiple detection methods publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkr504 contributor: fullname: Li – volume: 127 start-page: 11348 year: 2005 ident: 10.1016/j.aca.2018.12.055_bib140 article-title: Boolean control of aptamer binding states publication-title: J. Am. Chem. Soc. doi: 10.1021/ja051362f contributor: fullname: Kolpashchikov – volume: 141 start-page: 1789 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib153 article-title: A unique dual recognition hairpin probe mediated fluorescence amplification method for sensitive detection of uracil-DNA glycosylase and endonuclease IV activities publication-title: Analyst doi: 10.1039/C5AN02483H contributor: fullname: Wu – volume: 117 start-page: 8272 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib41 article-title: Metal sensing by DNA publication-title: Chem. Rev. doi: 10.1021/acs.chemrev.7b00063 contributor: fullname: Zhou – volume: 134 start-page: 20601 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib57 article-title: Using distal-site mutations and allosteric inhibition to tune, extend, and narrow the useful dynamic range of aptamer-based sensors publication-title: J. Am. Chem. Soc. doi: 10.1021/ja310585e contributor: fullname: Porchetta – volume: 41 start-page: 220 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib91 article-title: Quadruplex formation as a molecular switch to turn on intrinsically fluorescent nucleotide analogs publication-title: Nucleic Acids Res. doi: 10.1093/nar/gks975 contributor: fullname: Johnson – volume: 63 start-page: 3427 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib192 article-title: Oligodeoxyfluorosides: strong sequence dependence of fluorescence emission publication-title: Tetrahedron doi: 10.1016/j.tet.2006.07.113 contributor: fullname: Wilson – volume: 98 start-page: 210 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib85 article-title: Pyrrolo-dC modified duplex DNA as a novel probe for the sensitive assay of base excision repair enzyme activity publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2017.06.052 contributor: fullname: Lee – volume: 9 start-page: 3055 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib106 article-title: Label-free fluorescence assay for rapid detection of RNase H activity based on Tb3+-induced G-quadruplex conjugates publication-title: Anal. Methods doi: 10.1039/C7AY00709D contributor: fullname: Wu – volume: 277 start-page: 273 year: 2019 ident: 10.1016/j.aca.2018.12.055_bib144 article-title: Sensitive aptamer-based fluorescene assay for ochratoxin A based on RNase H signal amplification publication-title: Food Chem. doi: 10.1016/j.foodchem.2018.10.130 contributor: fullname: Wu – volume: 409 start-page: 59 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib92 article-title: Self-dissociative primers for nucleic acid amplification and detection based on DNA quadruplexes with intrinsic fluorescence publication-title: Anal. Biochem. doi: 10.1016/j.ab.2010.10.011 contributor: fullname: Kankia – volume: 84 start-page: 5059 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib60 article-title: In situ, real-time monitoring of the 3′ to 5′ exonucleases secreted by living cells publication-title: Anal. Chem. doi: 10.1021/ac300745f contributor: fullname: Su – volume: 411 start-page: 366 year: 2001 ident: 10.1016/j.aca.2018.12.055_bib7 article-title: Genome maintenance mechanisms for preventing cancer publication-title: Nature doi: 10.1038/35077232 contributor: fullname: Hoeijmakers – volume: 100 start-page: 5541 year: 1996 ident: 10.1016/j.aca.2018.12.055_bib61 article-title: Nucleobase-specific quenching of fluorescent dyes. 1. Nucleobase one-electron redox potentials and their correlation with static and dynamic quenching efficiencies publication-title: J. Phys. Chem. doi: 10.1021/jp951507c contributor: fullname: Seidel – volume: 130 start-page: 336 year: 2008 ident: 10.1016/j.aca.2018.12.055_bib161 article-title: Pyrene excimer signaling molecular beacons for probing nucleic acids publication-title: J. Am. Chem. Soc. doi: 10.1021/ja076411y contributor: fullname: Conlon – volume: 53 start-page: 12878 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib172 article-title: A C-HCR assembly of branched DNA nanostructures for amplified uracil-DNA glycosylase assays publication-title: Chem. Commun. doi: 10.1039/C7CC07057H contributor: fullname: Wang – volume: 403 start-page: 859 year: 2000 ident: 10.1016/j.aca.2018.12.055_bib11 article-title: Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA publication-title: Nature doi: 10.1038/35002510 contributor: fullname: Bruner – volume: 9 start-page: 144 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib59 article-title: Use of a molecular beacon to track the activity of base excision repair protein OGG1 in live cells publication-title: DNA Repair doi: 10.1016/j.dnarep.2009.11.009 contributor: fullname: Mirbahai – volume: 406 start-page: 605 year: 2000 ident: 10.1016/j.aca.2018.12.055_bib158 article-title: A DNA-fuelled molecular machine made of DNA publication-title: Nature doi: 10.1038/35020524 contributor: fullname: Yurke – volume: 518 start-page: 35 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib50 article-title: Aptamer-based electrochemical biosensor by using Au-Pt nanoparticles, carbon nanotubes and acriflavine platform publication-title: Anal. Biochem. doi: 10.1016/j.ab.2016.10.001 contributor: fullname: Beiranvand – volume: 46 start-page: 3271 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib87 article-title: Pyrrolo-dC based fluorescent aptasensors for the molecular recognition of targets publication-title: Chem. Commun. doi: 10.1039/b923462d contributor: fullname: Li – volume: 87 start-page: 439 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib49 article-title: Simple and rapid chemiluminescence aptasensor for Hg2+ in contaminated samples: a new signal amplification mechanism publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2016.08.022 contributor: fullname: Qi – volume: 68 start-page: 228 year: 2003 ident: 10.1016/j.aca.2018.12.055_bib138 article-title: Influence of DNA aptamer structure on the specificity of binding to Taq DNA polymerase publication-title: Biochemistry (Mosc.) doi: 10.1023/A:1022609714768 contributor: fullname: Yakimovich – volume: 49 start-page: 5630 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib99 article-title: Detection of base excision repair enzyme activity using a luminescent G-quadruplex selective switch-on probe publication-title: Chem. Commun. doi: 10.1039/c3cc41129j contributor: fullname: Leung – volume: 280 start-page: 1066 year: 1998 ident: 10.1016/j.aca.2018.12.055_bib22 article-title: Inducible repair of thymine glycol detected by an ultrasensitive assay for DNA damage publication-title: Science doi: 10.1126/science.280.5366.1066 contributor: fullname: Le – volume: 27 start-page: 883 year: 2006 ident: 10.1016/j.aca.2018.12.055_bib4 article-title: DNA damage responses and their many interactions with the replication fork publication-title: Carcinogenesis doi: 10.1093/carcin/bgi319 contributor: fullname: Andreassen – volume: 47 start-page: 1201 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib69 article-title: A graphene oxide-based nano-beacon for DNA phosphorylation analysis publication-title: Chem. Commun. doi: 10.1039/C0CC04312E contributor: fullname: Wu – volume: 130 start-page: 5038 year: 2008 ident: 10.1016/j.aca.2018.12.055_bib33 article-title: Oligonucleotide-stabilized Ag nanocluster fluorophores publication-title: J. Am. Chem. Soc. doi: 10.1021/ja8005644 contributor: fullname: Richards – volume: 30 start-page: 2 year: 2008 ident: 10.1016/j.aca.2018.12.055_bib8 article-title: Base excision repair of oxidative DNA damage and association with cancer and aging publication-title: Carcinogenesis doi: 10.1093/carcin/bgn250 contributor: fullname: Maynard – volume: 13 start-page: 1721 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib51 article-title: Fluorescent probes of DNA repair publication-title: ACS Chem. Biol. doi: 10.1021/acschembio.7b00919 contributor: fullname: Wilson – volume: 51 start-page: 9942 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib141 article-title: Target DNA induced switches of DNA polymerase activity publication-title: Chem. Commun. doi: 10.1039/C5CC02060C contributor: fullname: Park – volume: 25 start-page: 463 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib10 article-title: Oxidative stress and 8-oxoguanine repair are enhanced in colon adenoma and carcinoma patients publication-title: Mutagenesis doi: 10.1093/mutage/geq028 contributor: fullname: Obtułowicz – volume: 42 start-page: 31 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib112 article-title: Double-strand DNA-templated formation of copper nanoparticles as fluorescent probe for label free nuclease enzymedetection publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2012.10.037 contributor: fullname: Hu – volume: 86 start-page: 3209 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib166 article-title: Graphene oxide-based amplified fluorescent biosensor for Hg2+ detection through hybridization chain reactions publication-title: Anal. Chem. doi: 10.1021/ac500192r contributor: fullname: Huang – volume: 90 start-page: 103 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib75 article-title: An end-point method based on graphene oxide for RNase H analysis and inhibitors screening publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2016.11.032 contributor: fullname: Zhao – volume: 104 start-page: 12616 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib32 article-title: Strongly emissive individual DNA-encapsulated Ag nanoclusters as single-molecule fluorophores publication-title: Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.0610677104 contributor: fullname: Vosch – volume: 105 start-page: 370 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib181 article-title: Targeting DNA damage response in cancer therapy publication-title: Cancer Sci. doi: 10.1111/cas.12366 contributor: fullname: Hosoya – volume: 4 start-page: 183 year: 2002 ident: 10.1016/j.aca.2018.12.055_bib16 article-title: Uncovering the complexities of retroviral ribonuclease H reveals its potential as a therapeutic target publication-title: AIDS Rev. contributor: fullname: Klarmann – volume: 1 start-page: 223 year: 1994 ident: 10.1016/j.aca.2018.12.055_bib120 article-title: A DNA enzyme that cleaves RNA publication-title: Chem. Biol. doi: 10.1016/1074-5521(94)90014-0 contributor: fullname: Breaker – volume: 4 start-page: 329 year: 1997 ident: 10.1016/j.aca.2018.12.055_bib3 article-title: How do DNA repair proteins locate damaged bases in the genome? publication-title: Chem. Biol. doi: 10.1016/S1074-5521(97)90123-X contributor: fullname: Verdine – volume: 69 start-page: 3271 year: 2004 ident: 10.1016/j.aca.2018.12.055_bib64 article-title: Unambiguous detection of target DNAs by excimer−monomer switching molecular beacons publication-title: J. Org. Chem. doi: 10.1021/jo049824f contributor: fullname: Fujimoto – volume: 49 start-page: 5498 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib143 article-title: Ultrasensitive detection of microRNAs by exponential isothermal amplification publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.201001375 contributor: fullname: Jia – volume: 92 start-page: 4641 year: 1995 ident: 10.1016/j.aca.2018.12.055_bib149 article-title: Rolling replication of short DNA circles publication-title: Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.92.10.4641 contributor: fullname: Fire – volume: 51 start-page: 15940 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib72 article-title: Enzyme-free and DNA-based multiplexer and demultiplexer publication-title: Chem. Commun. doi: 10.1039/C5CC05565B contributor: fullname: Wu – volume: 50 start-page: 5313 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib107 article-title: Label-free luminescence switch-on detection of T4 polynucleotide kinase activity using a G-quadruplex-selective probe publication-title: Chem. Commun. doi: 10.1039/C3CC47444E contributor: fullname: He – volume: 49 start-page: 7553 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib133 article-title: Probing the function of nucleotides in the catalytic cores of the 8-17 and 10-23 DNAzymes by abasic nucleotide and C3 spacer substitutions publication-title: Biochemistry doi: 10.1021/bi100304b contributor: fullname: Wang – volume: 272 start-page: 645 year: 1997 ident: 10.1016/j.aca.2018.12.055_bib47 article-title: Structure, recognition and adaptive binding in RNA aptamer complexes publication-title: J. Mol. Biol. doi: 10.1006/jmbi.1997.1281 contributor: fullname: Patel – volume: 6 start-page: 74 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib25 article-title: The significance of the alteration of 8-OHdG in serous ovarian carcinoma publication-title: J. Ovarian Res. doi: 10.1186/1757-2215-6-74 contributor: fullname: Xu – volume: 122 start-page: 10466 year: 2000 ident: 10.1016/j.aca.2018.12.055_bib128 article-title: A highly sensitive and selective catalytic DNA biosensor for lead ions publication-title: J. Am. Chem. Soc. doi: 10.1021/ja0021316 contributor: fullname: Li – volume: 89 start-page: 4488 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib52 article-title: Excision repair-initiated enzyme-assisted bicyclic cascade signal amplification for ultrasensitive detection of uracil-DNA glycosylase publication-title: Anal. Chem. doi: 10.1021/acs.analchem.6b04673 contributor: fullname: Wang – volume: 130 start-page: 350 year: 2005 ident: 10.1016/j.aca.2018.12.055_bib63 article-title: Using molecular beacon to monitor activity of E. coli DNA ligase publication-title: Analyst doi: 10.1039/b413959c contributor: fullname: Liu – volume: 6 start-page: 3692 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib122 article-title: A general approach to the design of allosteric, transcription factor-regulated DNAzymes publication-title: Chem. Sci. doi: 10.1039/C5SC00228A contributor: fullname: Adornetto – start-page: 1569 year: 2008 ident: 10.1016/j.aca.2018.12.055_bib126 article-title: A DNAzyme cascade for the amplified detection of Pb2+ ions or L-histidine publication-title: Chem. Commun. doi: 10.1039/b716774a contributor: fullname: Elbaz – volume: 48 start-page: 5316 year: 2009 ident: 10.1016/j.aca.2018.12.055_bib177 article-title: Fluorescence logic-signal-based multiplex detection of nucleases with the assembly of a cationic conjugated polymer and branched DNA publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.200901555 contributor: fullname: Feng – volume: 10 start-page: 4607 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib42 article-title: Programmable DNA switches and their applications publication-title: Nanoscale doi: 10.1039/C7NR07348H contributor: fullname: Harroun – volume: 344 start-page: 467 year: 1990 ident: 10.1016/j.aca.2018.12.055_bib119 article-title: Selection in vitro of an RNA enzyme that specifically cleaves single-stranded DNA publication-title: Nature doi: 10.1038/344467a0 contributor: fullname: Robertson – volume: 140 start-page: 5450 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib105 article-title: Label-free fluorescence light-up detection of T4 polynucleotide kinase activity using the split-to-intact G-quadruplex strategy by ligation-triggered and toehold-mediated strand displacement release publication-title: Analyst doi: 10.1039/C5AN01032B contributor: fullname: Zhou – volume: 181 start-page: 382 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib150 article-title: Sensitive and specific HBV genomic DNA detection using RCA-based QCM biosensor publication-title: Sensor. Actuator. B Chem. doi: 10.1016/j.snb.2013.01.063 contributor: fullname: Yao – volume: 32 start-page: 659 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib19 article-title: Recognition of damaged DNA: structure and dynamic markers publication-title: Med. Res. Rev. doi: 10.1002/med.20226 contributor: fullname: Germann – volume: 52 start-page: 9719 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib29 article-title: Poly (thymine)-templated selective formation of fluorescent copper nanoparticles publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.201304631 contributor: fullname: Qing – volume: 98 start-page: 1221 year: 1998 ident: 10.1016/j.aca.2018.12.055_bib13 article-title: Chemistry of glycosylases and endonucleases involved in base-excision repair publication-title: Chem. Rev. doi: 10.1021/cr980321h contributor: fullname: David – volume: 86 start-page: 4934 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib65 article-title: Target-catalyzed dynamic assembly-based pyrene excimer switching for enzyme-free nucleic acid amplified detection publication-title: Anal. Chem. doi: 10.1021/ac500834g contributor: fullname: Qing – volume: 137 start-page: 6829 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib168 article-title: Electrostatic nucleic acid nanoassembly enables hybridization chain reaction in living cells for ultrasensitive mRNA imaging publication-title: J. Am. Chem. Soc. doi: 10.1021/jacs.5b01778 contributor: fullname: Wu – volume: 6 start-page: 6866 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib77 article-title: A WS2 nanosheet based sensing platform for highly sensitive detection of T4 polynucleotide kinase and its inhibitors publication-title: Nanoscale doi: 10.1039/C4NR00944D contributor: fullname: Ge – volume: 182 start-page: 142 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib102 article-title: Label-free and nicking enzyme-assisted fluorescence signal amplification for RNase H determination based on a G-quadruplexe/thioflavin T complex publication-title: Talanta doi: 10.1016/j.talanta.2018.01.075 contributor: fullname: Wu – volume: 17 start-page: 479 year: 2005 ident: 10.1016/j.aca.2018.12.055_bib15 article-title: HIV-1-associated uracil DNA glycosylase activity controls dUTP misincorporation in viral DNA and is essential to the HIV-1 life cycle publication-title: Mol. Cell. doi: 10.1016/j.molcel.2005.01.016 contributor: fullname: Priet – volume: 10 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib53 article-title: A fluorescent probe to measure DNA damage and repair publication-title: PLoS One doi: 10.1371/journal.pone.0131330 contributor: fullname: Condie – volume: 41 start-page: 359 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib74 article-title: Graphene oxide-hairpin probe nanocomposite as a homogeneous assay platform for DNA base excision repair screening publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2012.08.053 contributor: fullname: Zhou – volume: 23 start-page: 17379 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib124 article-title: Enzyme-free colorimetric detection of Cu2+ by utilizing target-triggered DNAzymes and toehold-mediated DNA strand displacement events publication-title: Chem. Eur J. doi: 10.1002/chem.201704346 contributor: fullname: Park – volume: 99 start-page: 451 year: 2008 ident: 10.1016/j.aca.2018.12.055_bib9 article-title: DNA repair dysfunction in gastrointestinal tract cancers publication-title: Cancer Sci. doi: 10.1111/j.1349-7006.2007.00671.x contributor: fullname: Maehara – volume: 14 start-page: 303 year: 1996 ident: 10.1016/j.aca.2018.12.055_bib56 article-title: Molecular beacons: probes that fluoresce upon hybridization publication-title: Nat. Biotechnol. doi: 10.1038/nbt0396-303 contributor: fullname: Tyagi – volume: 22 start-page: 2108 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib66 article-title: Recent advances in nucleic acid targeting probes and supramolecular constructs based on pyrene-modified oligonucleotides publication-title: Molecules doi: 10.3390/molecules22122108 contributor: fullname: Krasheninina – volume: 9 start-page: 355 year: 2008 ident: 10.1016/j.aca.2018.12.055_bib68 article-title: Light-switching excimer beacon assays for ribonuclease H kinetic study publication-title: Chembiochem doi: 10.1002/cbic.200700542 contributor: fullname: Chen – volume: 126 start-page: 5207 year: 2004 ident: 10.1016/j.aca.2018.12.055_bib35 article-title: DNA-templated Ag nanocluster formation publication-title: J. Am. Chem. Soc. doi: 10.1021/ja031931o contributor: fullname: Petty – volume: 68 start-page: 736 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib111 article-title: DNA methyltransferase activity detection based on fluorescent silver nanocluster hairpin-shaped DNA probe with 5’-C-rich/G-rich-3’ tails publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2015.02.005 contributor: fullname: Liu – volume: 151 start-page: 22 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib96 article-title: Label-free fluorescence strategy for sensitive detection of exonuclease activity using SYBR Green I as probe publication-title: Spectrochim. Acta doi: 10.1016/j.saa.2015.06.052 contributor: fullname: Xu – volume: 8 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib179 article-title: Inhibition of DNA glycosylases via small molecule purine analogs publication-title: PLoS One doi: 10.1371/journal.pone.0081667 contributor: fullname: Jacobs – start-page: 4872 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib127 article-title: Colorimetric Cu2+ detection with a ligation DNAzyme and nanoparticles publication-title: Chem. Commun. doi: 10.1039/b712421j contributor: fullname: Liu – volume: 50 start-page: 401 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib160 article-title: Pyrene-excimer probes based on the hybridization chain reaction for the detection of nucleic acids in complex biological fluids publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.201005375 contributor: fullname: Huang – volume: 53 start-page: 10596 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib67 article-title: Sensitive detection of microRNAs by duplex specific nuclease-assisted target recycling and pyrene excimer switching publication-title: Chem. Commun. doi: 10.1039/C7CC06290G contributor: fullname: Ma – volume: 3 start-page: 103 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib157 article-title: Dynamic DNA nanotechnology using strand-displacement reactions publication-title: Nat. Chem. doi: 10.1038/nchem.957 contributor: fullname: Zhang – volume: 28 start-page: 17 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib31 article-title: Technological applications arising from the interactions of DNA bases with metal ions publication-title: Curr. Opin. Biotechnol. doi: 10.1016/j.copbio.2013.10.013 contributor: fullname: Park – volume: 284 start-page: 29725 year: 2009 ident: 10.1016/j.aca.2018.12.055_bib23 article-title: Aryl hydrocarbon receptor facilitates DNA strand breaks and 8-oxo-2′-deoxyguanosine formation by the aldo-keto reductase product benzo [a] pyrene-7, 8-dione publication-title: J. Biol. Chem. doi: 10.1074/jbc.M109.042143 contributor: fullname: Park – volume: 63 start-page: 3585 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib90 article-title: Monitoring G-quadruplex structures and G-quadruplex-ligand complex using 2-aminopurine modified oligonucleotides publication-title: Tetrahedron doi: 10.1016/j.tet.2006.08.108 contributor: fullname: Kimura – volume: 271 start-page: 100 year: 1997 ident: 10.1016/j.aca.2018.12.055_bib137 article-title: Inhibition of multiple thermostable DNA polymerases by a heterodimeric aptamer publication-title: J. Mol. Biol. doi: 10.1006/jmbi.1997.1165 contributor: fullname: Lin – volume: 7 start-page: 47143 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib147 article-title: Rapid and label-free strategy for the sensitive detection of Hg2+ based on target-triggered exponential strand displacement amplification publication-title: RSC Adv. doi: 10.1039/C7RA09226A contributor: fullname: Lee – volume: 7 start-page: 301 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib185 article-title: Protein sensing in living cells by molecular rotor-based fluorescence-switchable chemical probes publication-title: Chem. Sci. doi: 10.1039/C5SC02808F contributor: fullname: Yu – volume: 51 start-page: 13744 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib84 article-title: A fluorescent G-quadruplex probe for the assay of base excision repair enzyme activity publication-title: Chem. Commun. doi: 10.1039/C5CC05010C contributor: fullname: Lee – volume: 65 start-page: 103 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib95 article-title: Labeling-free fluorescent detection of DNA hybridization through FRET from pyrene excimer to DNA intercalator SYBR green I publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2014.10.029 contributor: fullname: Zhou – volume: 10 start-page: 3106 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib114 article-title: A DNA-silver nanocluster probe that fluoresces upon hybridization publication-title: Nano Lett. doi: 10.1021/nl101773c contributor: fullname: Yeh – volume: 451 start-page: 318 year: 2008 ident: 10.1016/j.aca.2018.12.055_bib155 article-title: Programming biomolecular self-assembly pathways publication-title: Nature doi: 10.1038/nature06451 contributor: fullname: Yin – volume: 408 start-page: 4311 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib110 article-title: Rapid restriction enzyme free detection of DNA methyltransferase activity based on DNA-templated silver nanoclusters publication-title: Anal. Bioanal. Chem. doi: 10.1007/s00216-016-9522-z contributor: fullname: Kermani – volume: 50 start-page: 295 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib130 article-title: Amplified detection of DNA through an autocatalytic and catabolic DNAzyme-mediated process publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.201005246 contributor: fullname: Wang – volume: 141 start-page: 6208 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib173 article-title: A DNA array based on clickable lesion-containing hairpin probes for multiplexed detection of base excision repair activities publication-title: Analyst doi: 10.1039/C6AN01165A contributor: fullname: Flaender – volume: 47 start-page: 4017 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib37 article-title: DNA metallization: principles, methods, structures, and applications publication-title: Chem. Soc. Rev. doi: 10.1039/C8CS00011E contributor: fullname: Chen – volume: 53 start-page: 3878 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib54 article-title: Cyclic enzymatic repairing-mediated dual-signal amplification for real-time monitoring of thymine DNA glycosylase publication-title: Chem. Commun. doi: 10.1039/C7CC00946A contributor: fullname: Wang – volume: 131 start-page: 116 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib115 article-title: A new label-free and turn-on strategy for endonuclease detection using a DNA-silver nanocluster probe publication-title: Talanta doi: 10.1016/j.talanta.2014.07.092 contributor: fullname: Tian – volume: 18 start-page: 240 year: 2006 ident: 10.1016/j.aca.2018.12.055_bib5 article-title: DNA damage repair: anytime, anywhere? publication-title: Curr. Opin. Cell Biol. doi: 10.1016/j.ceb.2006.03.004 contributor: fullname: Essers – volume: 131 start-page: 2433 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib182 article-title: Synthetic lethal targeting of DNA double-strand break repair deficient cells by human apurinic/apyrimidinic endonuclease inhibitors publication-title: Int. J. Canc. doi: 10.1002/ijc.27512 contributor: fullname: Sultana – volume: 109 start-page: 1 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib103 article-title: Thioflavin T as a fluorescence probe for biosensing applications publication-title: TrAC Trends Anal. Chem. (Reference Ed.) doi: 10.1016/j.trac.2018.09.013 contributor: fullname: Khusbu – volume: 86 start-page: 336 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib145 article-title: Exponential strand-displacement amplification for detection of microRNAs publication-title: Anal. Chem. doi: 10.1021/ac4038043 contributor: fullname: Shi – volume: 95 start-page: 288 year: 1998 ident: 10.1016/j.aca.2018.12.055_bib20 article-title: DNA oxidation matters: the HPLC-electrochemical detection assay of 8-oxo-deoxyguanosine and 8-oxo-guanine publication-title: Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.95.1.288 contributor: fullname: Helbock – volume: 17 start-page: 235 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib183 article-title: DNA polymerases as potential therapeutic targets for cancers deficient in the DNA mismatch repair proteins MSH2 or MLH1 publication-title: Cancer Cell doi: 10.1016/j.ccr.2009.12.046 contributor: fullname: Martin – volume: 49 start-page: 5665 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib30 article-title: Selective dsDNA-templated formation of copper nanoparticles in solution publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.200907256 contributor: fullname: Rotaru – volume: 949 start-page: 83 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib45 article-title: Coupling hybridization chain reaction with DNAzyme recycling for enzyme-free and dual amplified sensitive fluorescent detection of methyltransferase activity publication-title: Anal. Chim. Acta doi: 10.1016/j.aca.2016.11.003 contributor: fullname: Jiang – volume: 121 start-page: 8826 year: 2009 ident: 10.1016/j.aca.2018.12.055_bib70 article-title: Gold-nanoparticle-based multicolor nanobeacons for sequence-specific DNA analysis publication-title: Angew. Chem. Int. Ed. doi: 10.1002/ange.200901887 contributor: fullname: Song – volume: 18 start-page: 833 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib78 article-title: A class of human proteins that deliver functional proteins into mammalian cells in vitro and in vivo publication-title: Chem. Biol. doi: 10.1016/j.chembiol.2011.07.003 contributor: fullname: Cronican – volume: 68 start-page: 654 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib163 article-title: A DNA machine-based fluorescence amplification strategy for sensitive detection of uracil-DNA glycosylase activity publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2015.01.069 contributor: fullname: Wu – volume: 2 start-page: 275 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib28 article-title: DNA nanomachines publication-title: Nat. Nanotechnol. doi: 10.1038/nnano.2007.104 contributor: fullname: Bath – volume: 45 start-page: e45 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib186 article-title: A specific DNA-nanoprobe for tracking the activities of human apurinic/apyrimidinic endonuclease 1 in living cells publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkw1205 contributor: fullname: Zhai – volume: 4 start-page: 105 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib39 article-title: Metal ion sensors based on DNAzymes and related DNA molecules publication-title: Annu. Rev. Anal. Chem. doi: 10.1146/annurev.anchem.111808.073617 contributor: fullname: Zhang – volume: 137 start-page: 1713 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib97 article-title: Label-free fluorescent assay for real-time monitoring site-specific DNA cleavage by EcoRI endonuclease publication-title: Analyst doi: 10.1039/c2an16287c contributor: fullname: Deng – volume: 102 start-page: 179 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib135 article-title: Nucleic acid aptamer-based methods for diagnosis of infections publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2017.11.028 contributor: fullname: Park – volume: 24 start-page: 14500 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib46 article-title: A DNA as a substrate and an enzyme: direct profiling of methyltransferase activity by cytosine methylation of a DNAzyme publication-title: Chem. Eur J. doi: 10.1002/chem.201802822 contributor: fullname: Li – volume: 13 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib148 article-title: Abasic site-assisted inhibition of nicking endonuclease activity for the sensitive determination of uracil DNA glycosylase publication-title: Biotechnol. J. contributor: fullname: Ahn – volume: 138 start-page: 3647 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib187 article-title: Fluorescence monitoring of the oxidative repair of DNA alkylation damage by ALKBH3, a prostate cancer marker publication-title: J. Am. Chem. Soc. doi: 10.1021/jacs.6b00986 contributor: fullname: Beharry – volume: 40 start-page: 179 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib2 article-title: The DNA damage response: making it safe to play with knives publication-title: Mol. Cell. doi: 10.1016/j.molcel.2010.09.019 contributor: fullname: Ciccia – volume: 106 start-page: 927 year: 2002 ident: 10.1016/j.aca.2018.12.055_bib21 article-title: Elevated levels of oxidative DNA damage and DNA repair enzymes in human atherosclerotic plaques publication-title: Circulation doi: 10.1161/01.CIR.0000026393.47805.21 contributor: fullname: Martinet – volume: 140 start-page: 3500 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib170 article-title: Enzyme-free and label-free signal amplification for monitoring endonuclease activity and inhibition via hybridization chain reaction publication-title: Analyst doi: 10.1039/C5AN00304K contributor: fullname: Zhang – volume: 89 start-page: 11014 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib43 article-title: Fluorescence assay for ribonuclease H based on nonlabeled substrate and DNAzyme assisted cascade amplification publication-title: Anal. Chem. doi: 10.1021/acs.analchem.7b02899 contributor: fullname: Wang – volume: 5 start-page: 398 year: 2009 ident: 10.1016/j.aca.2018.12.055_bib17 article-title: Inhibition of HIV-1 ribonuclease H activity by novel frangula-emodine derivatives publication-title: Med. Chem. doi: 10.2174/157340609789117840 contributor: fullname: Tatyana – volume: 277 start-page: 2725 year: 2002 ident: 10.1016/j.aca.2018.12.055_bib88 article-title: Promoter clearance by T7 RNA polymerase initial bubble collapse and transcript dissociation monitored by base analog fluorescence publication-title: J. Biol. Chem. doi: 10.1074/jbc.M108856200 contributor: fullname: Liu – volume: 83 start-page: 8913 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib174 article-title: Intermolecular and intramolecular quencher based quantum dot nanoprobes for multiplexed detection of endonuclease activity and inhibition publication-title: Anal. Chem. doi: 10.1021/ac2013114 contributor: fullname: Huang – volume: 16 start-page: 2605 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib100 article-title: A quadruplex-based, label-free, and real-time fluorescence assay for RNase H activity and inhibition publication-title: Chem. Eur J. doi: 10.1002/chem.200902166 contributor: fullname: Hu – volume: 4 start-page: 2606 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib36 article-title: A smart magnetic nanoaptamer: construction, subcellular distribution and silencing HIF for cancer gene therapy publication-title: ACS Biomater. Sci. Eng. doi: 10.1021/acsbiomaterials.8b00204 contributor: fullname: Yang – volume: 48 start-page: 4549 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib86 article-title: Mismatched pyrrolo-dC-modified duplex DNA as a novel probe for sensitive detection of silver ions publication-title: Chem. Commun. doi: 10.1039/c2cc17148a contributor: fullname: Park – volume: 26 start-page: 2431 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib118 article-title: One-pot synthesis of fluorescent oligonucleotide Ag nanoclusters for specific and sensitive detection of DNA publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2010.10.026 contributor: fullname: Lan – volume: 64 start-page: 505 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib152 article-title: A dumbell probe-mediated rolling circle amplification strategy for highly sensitive transcription factor detection publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2014.09.068 contributor: fullname: Li – volume: 89 start-page: 7684 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib176 article-title: Homogeneously sensitive detection of multiple DNA glycosylases with intrinsically fluorescent nucleotides publication-title: Anal. Chem. doi: 10.1021/acs.analchem.7b01655 contributor: fullname: Zhang – volume: 555 start-page: 55 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib104 article-title: Label-free detection of exonuclease III activity and its inhibition based on DNA hairpin probe publication-title: Anal. Biochem. doi: 10.1016/j.ab.2018.06.014 contributor: fullname: Jiang – volume: 94 start-page: 456 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib116 article-title: Dumbbell DNA-templated CuNPs as a nano-fluorescent probe for detection of enzymes involved in ligase-mediated DNA repair publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2017.03.035 contributor: fullname: Qing – volume: 50 start-page: 3751 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib131 article-title: Fluorogenic DNAzyme probes as bacterial indicators publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.201100477 contributor: fullname: Ali – volume: 141 start-page: 96 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib169 article-title: A highly sensitive strategy for base excision repair enzyme activity detection based on graphene oxide mediated fluorescence quenching and hybridization chain reaction publication-title: Analyst doi: 10.1039/C5AN02255J contributor: fullname: Xi – volume: 4 start-page: 3781 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib26 article-title: Luminescent oligonucleotide-based detection of enzymes involved with DNA repair publication-title: Chem. Sci. doi: 10.1039/c3sc51228b contributor: fullname: Leung – volume: 50 start-page: 11879 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib167 article-title: A novel graphene oxide based fluorescent nanosensing strategy with hybridization chain reaction signal amplification for highly sensitive biothiol detection publication-title: Chem. Commun. doi: 10.1039/C4CC05309E contributor: fullname: Ge – volume: 85 start-page: 8455 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib109 article-title: DNA-templated silver nanoclusters for fluorescence turn-on assay of acetylcholinesterase activity publication-title: Anal. Chem. doi: 10.1021/ac401966d contributor: fullname: Zhang – volume: 262 start-page: 1001 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib146 article-title: A simple, sensitive, and label-free assay for alkaline phosphatase activity based on target-promoted exponential strand displacement amplification publication-title: Sensor. Actuator. B Chem. doi: 10.1016/j.snb.2018.02.054 contributor: fullname: Lee – volume: 5 start-page: 564 year: 2005 ident: 10.1016/j.aca.2018.12.055_bib6 article-title: Cancer in xeroderma pigmentosum and related disorders of DNA repair publication-title: Nat. Rev. Canc. doi: 10.1038/nrc1652 contributor: fullname: Cleaver – volume: 109 start-page: 1948 year: 2009 ident: 10.1016/j.aca.2018.12.055_bib27 article-title: Functional nucleic acid sensors publication-title: Chem. Rev. doi: 10.1021/cr030183i contributor: fullname: Liu – volume: 25 start-page: 301 year: 2009 ident: 10.1016/j.aca.2018.12.055_bib62 article-title: Singly labeled smart probes for real-time monitoring of the kinetics of dNTP misincorporation and single nucleotide extension in DNA intra-molecular polymerization publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2009.07.002 contributor: fullname: Song – volume: 408 start-page: 3275 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib101 article-title: Label-free molecular beacon for real-time monitoring of DNA polymerase activity publication-title: Anal. Bioanal. Chem. doi: 10.1007/s00216-016-9398-y contributor: fullname: Ma – volume: 51 start-page: 1689 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib188 article-title: Direct fluorescence monitoring of DNA base excision repair publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.201108135 contributor: fullname: Ono – volume: 11 start-page: 1336 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib14 article-title: Targeting synthetic lethality in DNA damage repair pathways as an anti-cancer strategy publication-title: Curr. Drug Targets doi: 10.2174/1389450111007011336 contributor: fullname: Moeller – volume: 50 start-page: 2935 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib151 article-title: A rolling circle amplification-based DNA machine for miRNA screening coupling catalytic hairpin assembly with DNAzyme formation publication-title: Chem. Commun. doi: 10.1039/c3cc49873e contributor: fullname: Zhuang – volume: 25 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib117 article-title: Effect of salts, solvents and buffer on miRNA detection using DNA silver nanocluster (DNA/AgNCs) probes publication-title: Nanotechnology doi: 10.1088/0957-4484/25/4/045101 contributor: fullname: Shah – volume: 131 start-page: 10320 year: 2009 ident: 10.1016/j.aca.2018.12.055_bib129 article-title: Colorimetric split G-quadruplex probes for nucleic acid sensing: improving reconstituted DNAzyme's catalytic efficiency via probe remodeling publication-title: J. Am. Chem. Soc. doi: 10.1021/ja902951b contributor: fullname: Nakayama – volume: 8 start-page: 4319 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib113 article-title: Simple and sensitive detection of uracil-DNA glycosylase activity using dsDNA-templated copper nanoclusters as fluorescent probes publication-title: Anal. Methods doi: 10.1039/C6AY00900J contributor: fullname: Cao – year: 2018 ident: 10.1016/j.aca.2018.12.055_bib73 article-title: ExoAPP: exosome-oriented, aptamer nanoprobe-enabled surface proteins profiling and detection publication-title: Anal. Chem. doi: 10.1021/acs.analchem.8b03959 contributor: fullname: Jin – volume: 57 start-page: 7051 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib38 article-title: Bottom-up synthesis and self-assembly of copper clusters into permanent excimer supramolecular nanostructures publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.201801806 contributor: fullname: Santiago-Gonzalez – volume: 129 start-page: 10110 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib80 article-title: Supercharging proteins can impart unusual resilience publication-title: J. Am. Chem. Soc. doi: 10.1021/ja071641y contributor: fullname: Lawrence – volume: 11 start-page: 57 year: 2004 ident: 10.1016/j.aca.2018.12.055_bib134 article-title: Dinucleotide junction cleavage versatility of 8-17 deoxyribozyme publication-title: Chem. Biol. doi: 10.1016/j.chembiol.2003.12.012 contributor: fullname: Cruz – volume: 12 start-page: 801 year: 2012 ident: 10.1016/j.aca.2018.12.055_bib180 article-title: DNA repair dysregulation from cancer driver to therapeutic target publication-title: Nat. Rev. Canc. doi: 10.1038/nrc3399 contributor: fullname: Curtin – volume: 126 start-page: 8498 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib79 article-title: A supercharged fluorescent protein as a versatile probe for homogeneous DNA detection and methylation analysis publication-title: Angew. Chem. Int. Ed. doi: 10.1002/ange.201403615 contributor: fullname: Lei – volume: 102 start-page: 11539 year: 2005 ident: 10.1016/j.aca.2018.12.055_bib191 article-title: Organically modified silica nanoparticles: a nonviral vector for in vivo gene delivery and expression in the brain publication-title: Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.0504926102 contributor: fullname: Bharali – volume: 10 start-page: 2334 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib178 article-title: Small molecule inhibitors of 8-oxoguanine DNA glycosylase-1 (OGG1) publication-title: ACS Chem. Biol. doi: 10.1021/acschembio.5b00452 contributor: fullname: Donley – volume: 51 start-page: 13373 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib81 article-title: DNA-mediated supercharged fluorescent protein/graphene oxide interaction for label-free fluorescence assay of base excision repair enzyme activity publication-title: Chem. Commun. doi: 10.1039/C5CC04759E contributor: fullname: Wang – volume: 51 start-page: 929 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib108 article-title: A label-free and sensitive fluorescent method for the detection of uracil-DNA glycosylase activity publication-title: Chem. Commun. doi: 10.1039/C4CC06170E contributor: fullname: Tao – volume: 101 start-page: 15275 year: 2004 ident: 10.1016/j.aca.2018.12.055_bib164 article-title: Triggered amplification by hybridization chain reaction publication-title: Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.0407024101 contributor: fullname: Dirks – volume: 127 start-page: 17412 year: 2005 ident: 10.1016/j.aca.2018.12.055_bib184 article-title: Uracil-directed ligand tethering: an efficient strategy for uracil DNA glycosylase (UNG) inhibitor development publication-title: J. Am. Chem. Soc. doi: 10.1021/ja055846n contributor: fullname: Jiang – volume: 44 start-page: 8636 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib34 article-title: Metal nanoclusters: novel probes for diagnostic and therapeutic applications publication-title: Chem. Soc. Rev. doi: 10.1039/C5CS00607D contributor: fullname: Tao – volume: 140 start-page: 6124 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib171 article-title: A label-free cyclic assembly of G-quadruplex nanowires for cascade amplification detection of T4 polynucleotide kinase activity and inhibition publication-title: Analyst doi: 10.1039/C5AN00968E contributor: fullname: Shi – volume: 991 start-page: 127 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib55 article-title: A label-free and highly sensitive strategy for uracil-DNA glycosylase activity detection based on stem-loop primer-mediated exponential amplification (SPEA) publication-title: Anal. Chim. Acta doi: 10.1016/j.aca.2017.08.042 contributor: fullname: Du – volume: 47 start-page: 4346 year: 2008 ident: 10.1016/j.aca.2018.12.055_bib125 article-title: A highly selective DNAzyme sensor for mercuric ions publication-title: Angew. Chem. Int. Ed. doi: 10.1002/anie.200800960 contributor: fullname: Hollenstein – volume: 42 start-page: 193 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib93 article-title: A universal and label-free aptasensor for fluorescent detection of ATP and thrombin based on SYBR Green I dye publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2012.10.064 contributor: fullname: Kong – volume: 28 start-page: 433 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib24 article-title: Effect of hOGG1 over-expression on cisplatin resistance in esophageal squamous carcinoma cells publication-title: Cancer Biother. Radiopharm. doi: 10.1089/cbr.2012.1287 contributor: fullname: Gao – volume: 185 start-page: 53 year: 2018 ident: 10.1016/j.aca.2018.12.055_bib154 article-title: Determination of RNase H activity via real-time monitoring of target-triggered rolling circle amplification publication-title: Microchim. Acta doi: 10.1007/s00604-017-2610-8 contributor: fullname: Lee – volume: 86 start-page: 6758 year: 2014 ident: 10.1016/j.aca.2018.12.055_bib94 article-title: Label-free fluorescence strategy for sensitive detection of adenosine triphosphate using a loop DNA probe with low background noise publication-title: Anal. Chem. doi: 10.1021/ac501730u contributor: fullname: Lin – volume: 102 start-page: 279 year: 2005 ident: 10.1016/j.aca.2018.12.055_bib190 article-title: Optical tracking of organically modified silica nanoparticles as DNA carriers: a nonviral, nanomedicine approach for gene delivery publication-title: Proc. Natl. Acad. Sci. U.S.A. doi: 10.1073/pnas.0408039101 contributor: fullname: Roy – volume: 8 start-page: 8202 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib71 article-title: A cobalt oxyhydroxide nanoflake-based nanoprobe for the sensitive fluorescence detection of T4 polynucleotide kinase activity and inhibition publication-title: Nanoscale doi: 10.1039/C6NR01427E contributor: fullname: Cen – start-page: 4342 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib76 article-title: Specific and sensitive detection of nucleic acids and RNases using gold nanoparticle-RNA-fluorescent dye conjugates publication-title: Chem. Commun. doi: 10.1039/b710306a contributor: fullname: Kim – volume: 87 start-page: 6470 year: 2015 ident: 10.1016/j.aca.2018.12.055_bib165 article-title: Structure-switching aptamer triggering hybridization chain reaction on the cell surface for activatable theranostics publication-title: Anal. Chem. doi: 10.1021/acs.analchem.5b01634 contributor: fullname: Wang – volume: 366 start-page: 237 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib82 article-title: Real-time monitoring of uracil removal by uracil–DNA glycosylase using fluorescent resonance energy transfer probes publication-title: Anal. Biochem. doi: 10.1016/j.ab.2007.04.049 contributor: fullname: Liu – volume: 12 start-page: 620 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib12 article-title: DNA repair mechanisms in dividing and non-dividing cells publication-title: DNA Repair doi: 10.1016/j.dnarep.2013.04.015 contributor: fullname: Iyama – volume: 32 start-page: 8284 year: 1993 ident: 10.1016/j.aca.2018.12.055_bib18 article-title: Evidence for an imino intermediate in the T4 endonuclease V reaction publication-title: Biochemistry doi: 10.1021/bi00083a032 contributor: fullname: Dodson – year: 2015 ident: 10.1016/j.aca.2018.12.055_bib48 article-title: Single-stranded DNA aptamers against pathogens and toxins: identification and biosensing applications publication-title: BioMed Res. Int. doi: 10.1155/2015/419318 contributor: fullname: Hong – volume: 8 start-page: 1662 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib139 article-title: Controlling DNA polymerization with a switchable aptamer publication-title: Chembiochem doi: 10.1002/cbic.200700296 contributor: fullname: Friedrichs – volume: 125 start-page: 7168 year: 2003 ident: 10.1016/j.aca.2018.12.055_bib189 article-title: Bioconjugated nanoparticles for DNA protection from cleavage publication-title: J. Am. Chem. Soc. doi: 10.1021/ja034450d contributor: fullname: He – volume: 85 start-page: 4321 year: 2013 ident: 10.1016/j.aca.2018.12.055_bib83 article-title: Chimeric RNA–DNA molecular beacons for quantification of nucleic acids, single nucleotide polymophisms, and nucleic acid damage publication-title: Anal. Chem. doi: 10.1021/ac301669y contributor: fullname: El-Yazbi – volume: 80 start-page: 91 year: 2016 ident: 10.1016/j.aca.2018.12.055_bib159 article-title: Cyclic up-regulation fluorescence of pyrene excimer for studying polynucleotide kinase activity based on dual amplification publication-title: Biosens. Bioelectron. doi: 10.1016/j.bios.2016.01.046 contributor: fullname: Xu – volume: 17 start-page: 4680 year: 2011 ident: 10.1016/j.aca.2018.12.055_bib121 article-title: Bioinspired catalyst design and artificial metalloenzymes publication-title: Chem. Eur J. doi: 10.1002/chem.201003646 contributor: fullname: Deuss – volume: 10 start-page: 272 year: 2006 ident: 10.1016/j.aca.2018.12.055_bib40 article-title: Nucleic acid aptamers and enzymes as sensors publication-title: Curr. Opin. Chem. Biol. doi: 10.1016/j.cbpa.2006.04.003 contributor: fullname: Navani – volume: 9 start-page: 16149 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib162 article-title: A label-free and enzyme-free signal amplification strategy for a sensitive RNase H activity assay publication-title: Nanoscale doi: 10.1039/C7NR04060A contributor: fullname: Lee – volume: 83 start-page: 463 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib98 article-title: Simple and convenient G-quadruplex-based turn-on fluorescence assay for 3′→5′ exonuclease activity publication-title: Anal. Chem. doi: 10.1021/ac1025896 contributor: fullname: Leung – volume: 264 start-page: 268 year: 1996 ident: 10.1016/j.aca.2018.12.055_bib136 article-title: Oligonucleotide inhibitors of Taq DNA polymerase facilitate detection of low copy number targets by PCR publication-title: J. Mol. Biol. doi: 10.1006/jmbi.1996.0640 contributor: fullname: Dang – volume: 43 start-page: 159 year: 2010 ident: 10.1016/j.aca.2018.12.055_bib89 article-title: Fluorescent nucleic acid base analogues publication-title: Q. Rev. Biophys. doi: 10.1017/S0033583510000090 contributor: fullname: Wilhelmsson – volume: 362 start-page: 709 year: 1993 ident: 10.1016/j.aca.2018.12.055_bib1 article-title: Instability and decay of the primary structure of DNA publication-title: Nature doi: 10.1038/362709a0 contributor: fullname: Lindahl – volume: 107 start-page: 3715 year: 2007 ident: 10.1016/j.aca.2018.12.055_bib132 article-title: Functional aptamers and aptazymes in biotechnology, diagnostics, and therapy publication-title: Chem. Rev. doi: 10.1021/cr0306743 contributor: fullname: Famulok – volume: 50 start-page: 2273 year: 2017 ident: 10.1016/j.aca.2018.12.055_bib123 article-title: Discovery and biosensing applications of diverse RNA-cleaving DNAzymes publication-title: Acc. Chem. 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Snippet | DNA repair pathways are closely associated with the maintenance of genomic integrity, disease outbreak, and the development of therapeutics. Owing to these... |
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SubjectTerms | Analytical methods Deoxyribonucleic acid Disease DNA DNA - chemistry DNA damage DNA Repair DNA repair enzyme DNA Repair Enzymes - analysis DNA Repair Enzymes - metabolism Drug development Enzymatic activity Enzymes Fluorescence Fluorescent biosensor Inhibitor Nucleic acid Outbreaks Repair Reviews |
Title | Nucleic acid-based fluorescent methods for the determination of DNA repair enzyme activities: A review |
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