Increased hsa-miR-100-5p Expression Improves Hepatocellular Carcinoma Prognosis in the Asian Population with PLK1 Variant rs27770A>G

• Published in: Cancers Vol. 16; no. 1; p. 129
• Main Authors: Liao, Zhouxiang, Zhang, Qi, Yang, Lichao, Li, Hui, Mo, Wanling, Song, Zhenyu, Huang, Xuejing, Wen, Sha, Cheng, Xiaojing, He, Min
• Format: Journal Article
• Language: English
• Published: Switzerland MDPI AG 27.12.2023; MDPI
• Subjects: 3' Untranslated regions; Alleles; Asian Americans; Asian people; Bioinformatics; Biomarkers; Cell culture; Cell cycle; Gene frequency; Genes; Genetic engineering; Genetic variability; Genomes; Genotype & phenotype; Hepatitis; Hepatocellular carcinoma; hsa-miR-100-5p; Kinases; Liver cancer; Medical prognosis; MicroRNAs; Minority & ethnic groups; miRNA; miRNAs; Mortality; mRNA; Mutation; Plasmids; PLK1; Polo-like kinase; Polo-like kinase 1; Polyclonal antibodies; Population; Population genetics; Prognosis; Protein structure; Proteins; Risk factors; rs27770; Secondary structure; Single-nucleotide polymorphism; Software; Transfection; United States > US; China; miRNAs; rs27770; hsa-miR-100-5p; prognosis; hepatocellular carcinoma; PLK1
• ISSN: 2072-6694; 2072-6694
• DOI: 10.3390/cancers16010129

Hepatocellular carcinoma (HCC) has the highest incidence and mortality in the Asian population, and race is an independent risk factor affecting survival time in liver cancer. Micro RNAs (miRNAs) are remarkably dysregulated in HCC and closely associated with HCC prognosis. Recent studies show that genetic variability between ethnic groups may result in differences in the specificity of HCC miRNA biomarkers. Here, we reveal a high expression level of hsa-miR-100-5p, an HCC prognosis-related miRNA, which improves HCC prognosis in the Asian Population with Polo-like kinase 1 (PLK1) variant rs27770A>G. In this study, we discovered that hsa-miR-100-5p was downregulated in various HCC cell lines. While mimics transient transfection and mouse liver cancer model confirmed the interaction between hsa-miR-100-5p and , a stratified analysis based on the Cancer Genome Atlas Liver Hepatocellular Carcinoma (TCGA-LIHC) data suggest both low hsa-miR-100-5p expression level and high expression level associated with poor HCC prognosis, especially in the Asian population. According to the 1000 Genomes Project database, the SNP rs27770 located in 3'UTR of had a significantly higher G allele frequency in the East Asian population. Bioinformatics analysis suggested that rs27770 A>G affects mRNA secondary structure and alters the hsa-miR-100-5p/ interaction by forming an additional seedless binding site. This racial variation caused to be more vulnerable to hsa-miR-100-5p inhibition, resulting in hsa-miR-100-5p being more favorable for HCC prognosis in the Asian population.