A responsive pure DNA hydrogel for label-free detection of lead ion

• Published in: Analytica chimica acta Vol. 1157; p. 338400
• Main Authors: Chu, Jian, Chen, Chun, Li, Xijian, Yu, Libing, Li, Wenjing, Cheng, Mengxi, Tang, Wei, Xiong, Zhonghua
• Format: Journal Article
• Language: English
• Published: Netherlands Elsevier B.V 01.05.2021
• Subjects: Biosensing Techniques; DNA; DNA hydrogel; DNA, Catalytic; DNAzyme; Hydrogels; Ions; Label-free detection; Lead; Limit of Detection; DNAzyme; Lead; DNA hydrogel; Label-free detection
• ISSN: 0003-2670; 1873-4324
• DOI: 10.1016/j.aca.2021.338400

It is of great significance to develop facile and economical strategies for on-site detection and treatment of toxic metal ions. Stimulus-responsive DNA hydrogel materials have been increasingly used for convenient detection of metal ions due to their advantages such as simplicity, portability, and ease of storage. However, these methods still require encapsulation of signal tags by labeling or embedding. In this paper, a one-step preparation of Pb2+-responsive pure DNA hydrogel material was designed to realize a new label-free strategy for Pb2+ biosensing. The Pb2+-dependent DNAzyme strand and substrate strand were introduced to fabricate the DNA hydrogel. The presence of Pb2+ in the sample activates the enzyme strand in the hydrogel skeleton and triggers the cleavage of the substrate, thereby destroy the hydrogel structure. DNA fragments released by the collapsed hydrogel were readily measured as signal output for quantifying Pb2+ concentrations with a minimum detection limit of 7.7 nM. We successfully eliminated the need for embedding or labeling of signal molecules by using the DNA molecules that construct hydrogels as the signal output. And the newly developed method for label-free detection of Pb2+ based on pure DNA hydrogel is simple, easy readout, and cost-effective. By adjusting the DNAzyme and substrate sequences, label-free analysis of other metal ions can also be achieved. We expect that our strategy can be applied to the field detection of toxic metal ions. [Display omitted] •A one-step preparation of Pb2+-responsive pure DNA hydrogel was designed to realize label-free detection of lead ion.•This strategy successfully eliminated the need for embedding or tagging extra signal molecules.•The developed label-free method based on pure DNA hydrogel is facile, easy readout, and cost-effective.