Two tandemly repeated telomere-associated sequences in Nicotiana plumbaginifolia

• Published in: Chromosome research Vol. 5; no. 8; pp. 561 - 568
• Main Authors: Chen, C.M, Wang, C.T, Wang, C.J, Ho, C.H, Kao, Y.Y, Chen, C.C
• Format: Journal Article
• Language: English
• Published: Netherlands Springer Nature B.V 01.12.1997
• Subjects: Base Sequence; Chromosome Mapping; Chromosomes; Cloning, Molecular; DNA, Plant - genetics; Flowers & plants; Fluorescence in situ hybridization; genbank/u12624; genbank/u12625; genbank/u12626; genbank/u12627; genbank/u12628; genbank/u12629; genbank/u12630; genbank/u12631; genbank/y12621; genbank/y12622; genbank/y12623; Genomics; In Situ Hybridization, Fluorescence - methods; Molecular Sequence Data; Nicotiana - genetics; nucleotide sequences; Plants, Toxic; Repetitive Sequences, Nucleic Acid - genetics; Sequence Homology, Nucleic Acid; Telomere - genetics
• ISSN: 0967-3849; 1573-6849
• DOI: 10.1023/A:1018449920968

Two tandemly repeated telomere-associated sequences, NP3R and NP4R, have been isolated from Nicotiana plumbaginifolia. The length of a repeating unit for NP3R and NP4R is 165 and 180 nucleotides respectively. The abundance of NP3R, NP4R and telomeric repeats is, respectively, 8.4 x 10(4), 6 x 10(3) and 1.5 x 10(6) copies per haploid genome of N. plumbaginifolia. Fluorescence in situ hybridization revealed that NP3R is located at the ends and/or in interstitial regions of all 10 chromosomes and NP4R on the terminal regions of three chromosomes in the haploid genome of N. plumbaginifolia. Sequence homology search revealed that not only are NP3R and NP4R homologous to HRS60 and GRS, respectively, two tandem repeats isolated from N. tabacum, but that NP3R and NP4R are also related to each other, suggesting that they originated from a common ancestral sequence. The role of these repeated sequences in chromosome healing is discussed based on the observation that two to three copies of a telomere-similar sequence were present in each repeating unit of NP3R and NP4R.