When Paul Berg meets Donald Crothers: an achiral connection through protein biosynthesis

• Published in: Nucleic acids research Vol. 52; no. 5; pp. 2130 - 2141
• Main Authors: Kumar, Pradeep, Sankaranarayanan, Rajan
• Format: Journal Article
• Language: English
• Published: England Oxford University Press 21.03.2024
• Subjects: Amino Acids - genetics; Aminoacyltransferases - genetics; Biochemistry; Critical Reviews and s; Eukaryota - chemistry; Eukaryota - genetics; Glycine - genetics; Protein Biosynthesis; RNA, Transfer, Amino Acyl - metabolism
• ISSN: 0305-1048; 1362-4962; 1362-4962
• DOI: 10.1093/nar/gkae117

Outliers in scientific observations are often ignored and mostly remain unreported. However, presenting them is always beneficial since they could reflect the actual anomalies that might open new avenues. Here, we describe two examples of the above that came out of the laboratories of two of the pioneers of nucleic acid research in the area of protein biosynthesis, Paul Berg and Donald Crothers. Their work on the identification of D-aminoacyl-tRNA deacylase (DTD) and ‘Discriminator hypothesis’, respectively, were hugely ahead of their time and were partly against the general paradigm at that time. In both of the above works, the smallest and the only achiral amino acid turned out to be an outlier as DTD can act weakly on glycine charged tRNAs with a unique discriminator base of ‘Uracil’. This peculiar nature of glycine remained an enigma for nearly half a century. With a load of available information on the subject by the turn of the century, our work on ‘chiral proofreading’ mechanisms during protein biosynthesis serendipitously led us to revisit these findings. Here, we describe how we uncovered an unexpected connection between them that has implications for evolution of different eukaryotic life forms. Graphical Abstract Graphical Abstract