Introducing third-generation periodic table descriptors for nano-qRASTR modeling of zebrafish toxicity of metal oxide nanoparticles

• Published in: Beilstein journal of nanotechnology Vol. 15; no. 1; pp. 1142 - 1152
• Main Authors: Kar, Supratik, Yang, Siyun
• Format: Journal Article
• Language: English
• Published: Germany Beilstein-Institut 10.09.2024
• Subjects: Full Research Paper; metal nanoparticles; metal oxide nanoparticles; nano-qrastr; Nanoscience; Nanotechnology; periodic table descriptors; qsar; zebrafish; metal oxide nanoparticles; nano-qRASTR; zebrafish; metal nanoparticles; QSAR; periodic table descriptors
• ISSN: 2190-4286; 2190-4286
• DOI: 10.3762/bjnano.15.93

Metal oxide nanoparticles (MONPs) are widely used in medicine and environmental remediation because of their unique properties. However, their size, surface area, and reactivity can cause toxicity, potentially leading to oxidative stress, inflammation, and cellular or DNA damage. In this study, a nano-quantitative structure-toxicity relationship (nano-QSTR) model was initially developed to assess zebrafish toxicity for 24 MONPs. Previously established 23 first- and second-generation periodic table descriptors, along with five newly proposed third-generation descriptors derived from the periodic table, were employed. Subsequently, to enhance the quality and predictive capability of the nano-QSTR model, a nano-quantitative read across structure-toxicity relationship (nano-qRASTR) model was created. This model integrated read-across descriptors with modeled descriptors from the nano-QSTR approach. The nano-qRASTR model, featuring three attributes, outperformed the previously reported simple QSTR model, despite having one less MONP. This study highlights the effective utilization of the nano-qRASTR algorithm in situations with limited data for modeling, demonstrating superior goodness-of-fit, robustness, and predictability ( = 0.81, = 0.70, / = 0.76) compared to simple QSTR models. Finally, the developed nano-qRASTR model was applied to predict toxicity data for an external dataset comprising 35 MONPs, addressing gaps in zebrafish toxicity assessment.