Immersed boundary simulations of cell-cell interactions in whole blood

• Published in: Journal of computational physics Vol. 469; p. 111499
• Main Authors: Kassen, Andrew, Barrett, Aaron, Shankar, Varun, Fogelson, Aaron L.
• Format: Journal Article
• Language: English
• Published: Cambridge Elsevier Inc 15.11.2022; Elsevier Science Ltd
• Subjects: Blood; Blood platelets; Blood vessels; Computational physics; Endothelium; Erythrocytes; Image reconstruction; Immersed boundary; Meshless methods; Platelets; Radial basis function; RBFs; Simulation; Whole blood; Whole blood; RBFs; Immersed boundary; Endothelium
• ISSN: 0021-9991; 1090-2716
• DOI: 10.1016/j.jcp.2022.111499

We present a new method for the geometric reconstruction of elastic surfaces simulated by the immersed boundary method with the goal of simulating the motion and interactions of cells in whole blood. Our method uses parameter-free radial basis functions for high-order meshless parametric reconstruction of point clouds and the elastic force computations required by the immersed boundary method. This numerical framework allows us to consider the effect of endothelial geometry and red blood cell motion on the motion of platelets. We find red blood cells to be crucial for understanding the motion of platelets, to the point that the geometry of the vessel wall has a negligible effect in the presence of RBCs. We describe certain interactions that force the platelets to remain near the endothelium for extended periods, including a novel platelet motion that can be seen only in 3-dimensional simulations that we term “unicycling.” We also observe red blood cell-mediated interactions between platelets and the endothelium for which the platelet has reduced speed. We suggest that these behaviors serve as mechanisms that allow platelets to better maintain vascular integrity. •R radial basis function-based modeling of blood cells in 3-dimensional immersed boundary whole blood simulations.•R simulations of blood flow over physiologically inspired endothelium.•R observation and characterization of novel interactions between red blood cells, platelets, and endothelium.