Evaluation of a Novel MAGEC1 Variant and Susceptibility to Ovarian Cancer in the North Indian Population

To check the correlation between the MAGE Family Member C1 ( gene variant rs176036 and ovarian cancer risk among the Jammu and Kashmir population. A case-control association study of the gene variant rs176036 (G > A) and ovarian cancer. The variation was identified through whole exome sequencing,...

Full description

Saved in:
Bibliographic Details
Published inGenetic testing and molecular biomarkers Vol. 29; no. 7; p. 179
Main Authors Sharma, Minerva, Verma, Sonali, Bhagat, Vanshika, Tufail, Ziya, Jamwal, Rajeshwer Singh, Sharma, Bhawani, Chander, Gresh, Shah, Ruchi, Bhat, Audesh, Dhar, Manushi, Singh, Supinder, Kumar, Rakesh
Format Journal Article
LanguageEnglish
Published United States 01.07.2025
Subjects
Online AccessGet more information

Cover

Loading…
Abstract To check the correlation between the MAGE Family Member C1 ( gene variant rs176036 and ovarian cancer risk among the Jammu and Kashmir population. A case-control association study of the gene variant rs176036 (G > A) and ovarian cancer. The variation was identified through whole exome sequencing, and the selected variant was genotyped in 111 patients with ovarian cancer and 107 healthy controls belonging to the Jammu and Kashmir region of North India using Sanger sequencing to confirm its association with the ovarian cancer. Odds ratio (OR) and other statistical values were calculated using standard tools. The allelic frequency distribution was found to be similar between cases and controls, with the dominant allele (G) present in 89.6% of cases and 90.2% of controls ( = 0.84). The allelic OR for the dominant allele was 1.08 (0.55-2.11), which is nonsignificant ( = 0.83). The present study suggests that the rs176036 variant does not confer any increased risk of ovarian cancer among population of Jammu and Kashmir.
AbstractList To check the correlation between the MAGE Family Member C1 ( gene variant rs176036 and ovarian cancer risk among the Jammu and Kashmir population. A case-control association study of the gene variant rs176036 (G > A) and ovarian cancer. The variation was identified through whole exome sequencing, and the selected variant was genotyped in 111 patients with ovarian cancer and 107 healthy controls belonging to the Jammu and Kashmir region of North India using Sanger sequencing to confirm its association with the ovarian cancer. Odds ratio (OR) and other statistical values were calculated using standard tools. The allelic frequency distribution was found to be similar between cases and controls, with the dominant allele (G) present in 89.6% of cases and 90.2% of controls ( = 0.84). The allelic OR for the dominant allele was 1.08 (0.55-2.11), which is nonsignificant ( = 0.83). The present study suggests that the rs176036 variant does not confer any increased risk of ovarian cancer among population of Jammu and Kashmir.
Author Singh, Supinder
Bhagat, Vanshika
Jamwal, Rajeshwer Singh
Kumar, Rakesh
Verma, Sonali
Bhat, Audesh
Chander, Gresh
Dhar, Manushi
Sharma, Minerva
Tufail, Ziya
Shah, Ruchi
Sharma, Bhawani
Author_xml – sequence: 1
  givenname: Minerva
  surname: Sharma
  fullname: Sharma, Minerva
  organization: School of Biotechnology, Shri Mata Vaishno Devi University, Katra, India
– sequence: 2
  givenname: Sonali
  surname: Verma
  fullname: Verma, Sonali
  organization: Indian Council of Medical Research-Centre for Advance Research, Shri Mata Vaishno Devi University, Katra, India
– sequence: 3
  givenname: Vanshika
  surname: Bhagat
  fullname: Bhagat, Vanshika
  organization: School of Biotechnology, Shri Mata Vaishno Devi University, Katra, India
– sequence: 4
  givenname: Ziya
  surname: Tufail
  fullname: Tufail, Ziya
  organization: School of Biotechnology, Shri Mata Vaishno Devi University, Katra, India
– sequence: 5
  givenname: Rajeshwer Singh
  surname: Jamwal
  fullname: Jamwal, Rajeshwer Singh
  organization: School of Biotechnology, Shri Mata Vaishno Devi University, Katra, India
– sequence: 6
  givenname: Bhawani
  surname: Sharma
  fullname: Sharma, Bhawani
  organization: School of Biotechnology, Shri Mata Vaishno Devi University, Katra, India
– sequence: 7
  givenname: Gresh
  surname: Chander
  fullname: Chander, Gresh
  organization: Indian Council of Medical Research-Centre for Advance Research, Shri Mata Vaishno Devi University, Katra, India
– sequence: 8
  givenname: Ruchi
  surname: Shah
  fullname: Shah, Ruchi
  organization: School of Biotechnology, Shri Mata Vaishno Devi University, Katra, India
– sequence: 9
  givenname: Audesh
  surname: Bhat
  fullname: Bhat, Audesh
  organization: Centre for Molecular Biology, Central University of Jammu, Jammu & Kashmir, India
– sequence: 10
  givenname: Manushi
  surname: Dhar
  fullname: Dhar, Manushi
  organization: Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal, India
– sequence: 11
  givenname: Supinder
  surname: Singh
  fullname: Singh, Supinder
  organization: Department of Medicine, ASCOMS, Jammu, India
– sequence: 12
  givenname: Rakesh
  orcidid: 0000-0002-0741-3663
  surname: Kumar
  fullname: Kumar, Rakesh
  organization: Indian Council of Medical Research-Centre for Advance Research, Shri Mata Vaishno Devi University, Katra, India
BackLink https://www.ncbi.nlm.nih.gov/pubmed/40626660$$D View this record in MEDLINE/PubMed
BookMark eNo1j11LwzAYRoMo7kNvvZT3D3QmaZY2l6PMOZhO8ON2vEkTF-nS0qaD_fvNqVcPhwMHnhG5DHWwhNwxOmE0Vw9fcacnnPLphFKuLsiQKTFNTpwNyKjrvimVIs3lNRkIKrmUkg7Jdr7Hqsfo6wC1A4SXem8reJ4t5gWDT2w9hggYSnjrO2Ob6LWvfDxArGG9P2soMBjbgg8Qt_YUaOMWlqH8Ua9101fn-g25clh19vZvx-Tjcf5ePCWr9WJZzFaJ4SqLiWCO5cqYVKDQTglUjqXaUqZLO8XUUZayUkirUCrkFiWTJjNcyBw1U5njY3L_2216vbPlpmn9DtvD5v8yPwJTPljj
ContentType Journal Article
DBID CGR
CUY
CVF
ECM
EIF
NPM
DOI 10.1089/gtmb.2025.0029
DatabaseName Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
DatabaseTitle MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
DatabaseTitleList MEDLINE
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
DeliveryMethod no_fulltext_linktorsrc
Discipline Medicine
Biology
EISSN 1945-0257
ExternalDocumentID 40626660
Genre Journal Article
GeographicLocations India
GeographicLocations_xml – name: India
GroupedDBID ---
0R~
29H
4.4
53G
ABBKN
ABJNI
ACGFS
ACIWK
ACPRK
ADBBV
AENEX
AFRAH
ALMA_UNASSIGNED_HOLDINGS
BNQNF
CAG
CGR
COF
CUY
CVF
DU5
EBS
ECM
EIF
EJD
F5P
IAO
IER
IGS
IHR
IM4
ITC
NPM
O9-
RML
UE5
ID FETCH-LOGICAL-c297t-41f189cc34a4bf94a9f13be01bde5a3f0131d46e9a69a2ea616c7c2468ab197f2
IngestDate Wed Jul 16 06:55:08 EDT 2025
IsPeerReviewed true
IsScholarly true
Issue 7
Keywords MAGEC1
Jammu and Kashmir
Sanger sequencing
Language English
LinkModel OpenURL
MergedId FETCHMERGED-LOGICAL-c297t-41f189cc34a4bf94a9f13be01bde5a3f0131d46e9a69a2ea616c7c2468ab197f2
ORCID 0000-0002-0741-3663
PMID 40626660
ParticipantIDs pubmed_primary_40626660
PublicationCentury 2000
PublicationDate 2025-07-01
PublicationDateYYYYMMDD 2025-07-01
PublicationDate_xml – month: 07
  year: 2025
  text: 2025-07-01
  day: 01
PublicationDecade 2020
PublicationPlace United States
PublicationPlace_xml – name: United States
PublicationTitle Genetic testing and molecular biomarkers
PublicationTitleAlternate Genet Test Mol Biomarkers
PublicationYear 2025
SSID ssj0064386
Score 2.3767674
Snippet To check the correlation between the MAGE Family Member C1 ( gene variant rs176036 and ovarian cancer risk among the Jammu and Kashmir population. A...
SourceID pubmed
SourceType Index Database
StartPage 179
SubjectTerms Adult
Aged
Alleles
Antigens, Neoplasm - genetics
Antigens, Neoplasm - metabolism
Case-Control Studies
Female
Gene Frequency - genetics
Genetic Predisposition to Disease - genetics
Genotype
Humans
India
Middle Aged
Neoplasm Proteins - genetics
Neoplasm Proteins - metabolism
Odds Ratio
Ovarian Neoplasms - genetics
Polymorphism, Single Nucleotide - genetics
Title Evaluation of a Novel MAGEC1 Variant and Susceptibility to Ovarian Cancer in the North Indian Population
URI https://www.ncbi.nlm.nih.gov/pubmed/40626660
Volume 29
hasFullText
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV3fb9MwELY6ENNeEAwY45f8wFuVUTuOEz9OVWEgbSC1qyZeJjuxtwk1nSCdtP0r_LPc2U7ajh8CXqLKrtsq99W-u3z3HSGvM6ROQdyRyEqliZCsTCDO0ongrlJllanUW_rwSB4ciw8n2Umv932FtbRozF5588u6kv-xKoyBXbFK9h8s230oDMBrsC9cwcJw_Ssbjzqp7lDmeDS_QqLq_rvRkPWnEAXrSCAfL755-opnwnp_8-OVn-4P0epfO7ajf4rzvvZ6BZ-63l6rHizqVKPIa4PyHLHAcdb22O1jNT8SfpbPiMZeGzsw9GvMALcTUxvHxz4Y6PIC5_pM-5NhqpFK9qVbMFk4HTLWny-u9Wq6gmcdtRVOm7DFKoE14UGWut2DY9YjYC1f2VBZaDXz00Y_KFAn9ayZmT38FsyLrb0RDHU582YHjwWckNC04M-zt4S326kNsgEhCPZUxURQOOTBjytkqwFaqDfrP2SLbLaLb0Ur3muZPCD3Y7hB9wN2HpKerbfJvdCA9HqbbB5GasUjcr4EE507qqkHEw1gohFMFKxN18FEmzmNYKIBTPSipgAm6sFEA5joEkyPyfHb0WR4kMQ2HEnJVd4kgjlWqLJMhRbGKaGVY6mxA2Yqm-nUoWJTJaRVWirNrZZMlnnJhSy0YSp3_Am5U89r-5TQrOLccJdzWCZk5lQ1UAORV4VmTltrdslOuFunl0Fr5bS9j89-O_OcbC1x9oLcdfDnti_BU2zMK2-zH1rgag8
linkProvider National Library of Medicine
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Evaluation+of+a+Novel+MAGEC1+Variant+and+Susceptibility+to+Ovarian+Cancer+in+the+North+Indian+Population&rft.jtitle=Genetic+testing+and+molecular+biomarkers&rft.au=Sharma%2C+Minerva&rft.au=Verma%2C+Sonali&rft.au=Bhagat%2C+Vanshika&rft.au=Tufail%2C+Ziya&rft.date=2025-07-01&rft.eissn=1945-0257&rft.volume=29&rft.issue=7&rft.spage=179&rft_id=info:doi/10.1089%2Fgtmb.2025.0029&rft_id=info%3Apmid%2F40626660&rft_id=info%3Apmid%2F40626660&rft.externalDocID=40626660