Disruption of a potential disulfide bond of Cys65-Cys141 on the structure and stability of globin X from zebrafish

• Published in: Physical chemistry chemical physics : PCCP Vol. 27; no. 5; pp. 2828 - 2833
• Main Authors: Pan, Aiqun, Liu, Xichun, Han, Hui, Gao, Shu-Qin, Lin, Ying-Wu
• Format: Journal Article
• Language: English
• Published: England Royal Society of Chemistry 29.01.2025
• Subjects: Animals; Chemical bonds; Circular Dichroism; Cysteine - chemistry; Dichroism; Disulfides - chemistry; Electron paramagnetic resonance; Electron spin; Electron Spin Resonance Spectroscopy; Globins - chemistry; Globins - genetics; Globins - metabolism; Heme - chemistry; Hydrogen peroxide; Molecular dynamics; Molecular Dynamics Simulation; Protein Stability; Proteins; Stability; Zebrafish; Zebrafish Proteins - chemistry; Zebrafish Proteins - genetics; Zebrafish Proteins - metabolism
• ISSN: 1463-9076; 1463-9084; 1463-9084
• DOI: 10.1039/d4cp04253k

Globin X is a newly discovered member of the globin family, while its structure and function are not fully understood. In this study, we performed protein modelling studies using Alphafold3 and molecular dynamics simulations, which suggested that the protein adopts a typical globin fold, with the formation of a potential disulfide bond of Cys65 and Cys141. To elucidate the role of this unique disulfide in protein structure and stability, we constructed a double mutant of C65S/C141S by mutating the two cysteine residues to serine. As suggested by protein mass, ultraviolet-visible (UV-Vis) and circular dichroism (CD) spectroscopy analyses, the potential disulfide bond has minimal effect on the overall protein structure, but its absence reduces the protein stability. Electron paramagnetic resonance (EPR) analysis also revealed an increase in the proportion of high-spin state heme iron, which accelerates the rate of heme degradation in reaction with H 2 O 2 . This study highlights the critical role of the Cys65-Cys141 in maintaining the stability of globin X and the bis-His heme coordination state, providing insights into the structure-function relationship of the newly discovered globin. Removal of the disulfide bond of Cys65-Cys14 in a newly discovered globin X was shown to alter the heme coordination state and protein reactivity, highlighting the critical role of the disulfide bond.