Lipopolysaccharides from six strains of Acetobacter diazotrophicus
Lipopolysaccharides from six nitrogen-fixing strains of Acetobacter diazotrophicus (PR2, PAL3, PAL5, PR4, PR14, PR20), isolated from sugarcane, were purified by phenol-water extraction and ultracentrifugation. The relatively large molecular mass observed by SDS-PAGE indicated that the lipopolysaccha...
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| Published in | FEMS microbiology letters Vol. 132; no. 1/2; pp. 45 - 50 |
|---|---|
| Main Authors | , , , , |
| Format | Journal Article |
| Language | English |
| Published |
Oxford, UK
Blackwell Publishing Ltd
01.10.1995
Blackwell Wiley-Blackwell |
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| Abstract | Lipopolysaccharides from six nitrogen-fixing strains of Acetobacter diazotrophicus (PR2, PAL3, PAL5, PR4, PR14, PR20), isolated from sugarcane, were purified by phenol-water extraction and ultracentrifugation. The relatively large molecular mass observed by SDS-PAGE indicated that the lipopolysaccharides of each strain possessed an O-side chain. Analysis of each lipopolysaccharide by colorimetric assays and by gas liquid chromatography/mass spectrometry combination showed that the core and lipid A composition was similar for all strains, containing 3-deoxy-D-manno-2-octulosonic acid, glucosamine and fatty acid (16-0, 3-OH-14, 2-OH-16:0, 3-OH-16:0). The neutral sugar composition showed the predominance of 6-deoxy-hexose (rhamnose and fucose) and ribose, in comparison with hexose (glucose, galactose, mannose). The presence of 6-deoxy-hexose and ribose containing O-side chains is discussed as a way of discriminating A. diazatrophicus from other Acetobacter species. |
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| AbstractList | Lipopolysaccharides from six nitrogen-fixing strains of Acetobacter diazotrophicus (PR2, PAL3, PAL5, PR4, PR14, PR20), isolated from sugarcane, were purified by phenol-water extraction and Ultracentrifugation. The relatively large molecular mass observed by SDS-PAGE indicated that the lipopolysaccharides of each strain possessed an O-side chain. Analysis of each lipopolysaccharide by colorimetric assays and by gas liquid chromatography/mass spectrometry combination showed that the core and lipid A composition was similar for all strains, containing 3-deoxy-D-manno-2-octulosonic acid, glucosamine and fatty acid (16-0, 3-OH-14, 2-OH-16:0, 3-OH-16:0). The neutral sugar composition showed the predominance of 6-deoxy-hexose (rhamnose and fucose) and ribose, in comparison with hexose (glucose, galactose, mamnose). The presence of 6-deoxy-hexose and ribose containing O-side chains is discussed as a way of discriminating A. diazotrophicus from other Acetobacter species. Lipopolysaccharides from six nitrogen-fixing strains of Acetobacter diazotrophicus (PR2, PAW, PALS, PR4, PR14, PR20), isolated from sugarcane, were purified by phenol-water extraction and ultracentrifugation. The relatively large molecular mass observed by SDS-PAGE indicated that the lipopolysaccharides of each strain possessed an O-side chain. Analysis of each lipopolysaccharide by calorimetric assays and by gas liquid chromatography/mass spectrometry combination showed that the core and lipid A composition was similar for all strains, containing 3-deoxy-D-manno-2-octulosonic acid, glucosamine and fatty acid (16-0, 3-OH-14, 2-OH-16:0, 3-OH-16:O). The neutral sugar composition showed the predominance of 6-deoxy-hexose (rhamnose and fucose) and ribose, in comparison with hexose (glucose, galactose, mannose). The presence of 6-deoxy-hexose and ribose containing O-side chains is discussed as a way of discriminating A. diazotrophicus from other Acetobacter species. Lipopolysaccharides from six nitrogen-fixing strains of Acetobacter diazotrophicus (PR2, PAL3, PAL5, PR4, PR14, PR20), isolated from sugarcane, were purified by phenol-water extraction and ultracentrifugation. The relatively large molecular mass observed by SDS-PAGE indicated that the lipopolysaccharides of each strain possessed an O-side chain. Analysis of each lipopolysaccharide by colorimetric assays and by gas liquid chromatography/mass spectrometry combination showed that the core and lipid A composition was similar for all strains, containing 3-deoxy-D-manno-2-octulosonic acid, glucosamine and fatty acid (16-0, 3-OH-14, 2-OH-16:0, 3-OH-16:0). The neutral sugar composition showed the predominance of 6-deoxy-hexose (rhamnose and fucose) and ribose, in comparison with hexose (glucose, galactose, mannose). The presence of 6-deoxy-hexose and ribose containing O-side chains is discussed as a way of discriminating A. diazatrophicus from other Acetobacter species. Lipopolysaccharides from six nitrogen‐fixing strains of Acetobacter diazotrophicus (PR2, PAL3, PAL5, PR4, PR14, PR20), isolated from sugarcane, were purified by phenol‐water extraction and ultracentrifugation. The relatively large molecular mass observed by SDS‐PAGE indicated that the lipopolysaccharides of each strain possessed an O‐side chain. Analysis of each lipopolysaccharide by colorimetric assays and by gas liquid chromatography/mass spectrometry combination showed that the core and lipid A composition was similar for all strains, containing 3‐deoxy‐d‐manno‐2‐octulosonic acid, glucosamine and fatty acid (16‐0, 3‐OH‐14, 2‐OH‐16:0, 3‐OH‐16:0). The neutral sugar composition showed the predominance of 6‐deoxy‐hexose (rhamnose and fucose) and ribose, in comparison with hexose (glucose, galactose, mannose). The presence of 6‐deoxy‐hexose and ribose containing O‐side chains is discussed as a way of discriminating A. diazotrophicus from other Acetobacter species. |
| Author | Stephan, M.P Debarbieux, L Fontaine, T Mendonca-Previato, L Previato, J.O |
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| Cites_doi | 10.1128/jb.171.2.1143-1150.1989 10.1021/ac60231a048 10.1007/BF02370096 10.1016/0005-2760(76)90094-1 10.1016/0076-6879(66)08014-5 10.1007/BF00446463 10.1128/jb.173.17.5371-5384.1991 10.1038/227680a0 10.1111/j.1432-1033.1983.tb07517.x 10.1128/JB.154.1.269-277.1983 10.1099/00207713-39-3-361 10.1111/j.1574-6968.1993.tb05942.x 10.1016/0008-6215(91)80014-E 10.1016/0003-2697(78)90260-9 10.1128/MMBR.50.2.193-225.1986 10.1042/bj1510491 |
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| Keywords | Acetobacteraceae Purification Structure activity relation Ribose Chemotaxonomy Lipopolysaccharide Bacteria Chemical composition Acetobacter Strain Acetobacter diazotrophicus Sugarcane 6-Deoxy-hexose |
| Language | English |
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| References | 1991; 220 1979; 29 1991; 173 1976; 450 1993; 106 1986; 50 1983; 133 1983; 154 1989; 135 1978; 85 1966; 8 1965; 5 1975; 151 1989; 171 1992; 13 1977; 115 1967; 37 1988; 108 1970; 227 1989; 39 Whestphal (10.1111/j.1574-6968.1995.tb07808.x-BIB9) 1965; 5 Maagd (10.1111/j.1574-6968.1995.tb07808.x-BIB7) 1989; 171 Karkhanis (10.1111/j.1574-6968.1995.tb07808.x-BIB12) 1978; 85 Tahara (10.1111/j.1574-6968.1995.tb07808.x-BIB18) 1976; 450 Halverson (10.1111/j.1574-6968.1995.tb07808.x-BIB5) 1986; 50 Dazzo (10.1111/j.1574-6968.1995.tb07808.x-BIB6) 1991; 173 Kumada (10.1111/j.1574-6968.1995.tb07808.x-BIB19) 1989; 135 Stephan (10.1111/j.1574-6968.1995.tb07808.x-BIB3) 1992; 13 Galanos (10.1111/j.1574-6968.1995.tb07808.x-BIB4) 1979; 29 Grimmecke (10.1111/j.1574-6968.1995.tb07808.x-BIB20) 1991; 220 Laemmli (10.1111/j.1574-6968.1995.tb07808.x-BIB10) 1970; 227 Hitchcock (10.1111/j.1574-6968.1995.tb07808.x-BIB11) 1983; 154 Cavalcante (10.1111/j.1574-6968.1995.tb07808.x-BIB1) 1988; 108 Sawardeker (10.1111/j.1574-6968.1995.tb07808.x-BIB14) 1967; 37 Kamerling (10.1111/j.1574-6968.1995.tb07808.x-BIB15) 1975; 151 Hitchcock (10.1111/j.1574-6968.1995.tb07808.x-BIB16) 1983; 133 Gillis (10.1111/j.1574-6968.1995.tb07808.x-BIB2) 1989; 39 Dekker (10.1111/j.1574-6968.1995.tb07808.x-BIB17) 1977; 115 Puohiniemi (10.1111/j.1574-6968.1995.tb07808.x-BIB8) 1993; 106 Ames (10.1111/j.1574-6968.1995.tb07808.x-BIB13) 1966; 8 |
| References_xml | – volume: 227 start-page: 680 year: 1970 end-page: 685 article-title: Cleavage of structural proteins during the assembly of the head of bacteriophage T4 publication-title: Nature (Lond.) – volume: 135 start-page: 1017 year: 1989 end-page: 1025 article-title: Chemical and biological properties of lipopolysaccharide, lipid A and degraded polysaccha ride from ATCC 33238 publication-title: J. Gen. Microbiol. – volume: 29 start-page: 321 year: 1979 end-page: 332 article-title: Chemical, physiochemical and biological properties of bacterial lipopolysaccharides publication-title: Progr. Clin. Biol. Res. – volume: 39 start-page: 361 year: 1989 end-page: 364 article-title: sp. nov, a nitrogen‐fixing acetic acid bacterium associated with sugarcane publication-title: Int. J. Syst. Bacteriol. – volume: 13 start-page: 207 year: 1992 end-page: 216 article-title: Characterization of capsular antigens in publication-title: Symbiosis – volume: 37 start-page: 1602 year: 1967 end-page: 1604 article-title: Quantitative determination of monosaccharides as their alditol acetates by gas liquid chromatography publication-title: Anal. Chem. – volume: 154 start-page: 269 year: 1983 end-page: 277 article-title: Morphological heterogeneity among lipopolysaccharide chemotype in silver‐stained polyacrylamide gels publication-title: J. Bacteriol. – volume: 5 start-page: 83 year: 1965 end-page: 91 article-title: Bacterial lipopolysaccharides: extraction with phenol‐water and further applications of the procedure publication-title: Methods Carbohydr. Chem. – volume: 106 start-page: 105 year: 1993 end-page: 110 article-title: Conformation of outer membrane protein OmpA produced in : influence of lipopolysaccharide publication-title: FEMS Microbiol. 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Chem. doi: 10.1021/ac60231a048 contributor: fullname: Sawardeker – volume: 108 start-page: 23 year: 1988 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB1 article-title: A new acid tolerant nitrogen-fixing bacterium associated with sugarcane publication-title: Plant Soil doi: 10.1007/BF02370096 contributor: fullname: Cavalcante – volume: 450 start-page: 225 year: 1976 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB18 article-title: An omithine containing lipid isolated from Gluconobacter cerinus publication-title: Biochem. Biophys. Acta doi: 10.1016/0005-2760(76)90094-1 contributor: fullname: Tahara – volume: 135 start-page: 1017 year: 1989 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB19 article-title: Chemical and biological properties of lipopolysaccharide, lipid A and degraded polysaccha ride from Wolinella recta ATCC 33238 publication-title: J. Gen. Microbiol. contributor: fullname: Kumada – volume: 8 start-page: 115 year: 1966 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB13 article-title: Assay of inorganic phosphate, total phosphate and phosphatases publication-title: Methods Enzymol. doi: 10.1016/0076-6879(66)08014-5 contributor: fullname: Ames – volume: 115 start-page: 353 year: 1977 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB17 article-title: Isolation of α-glucan and lipopolysaccharide fractions from Acetobacter xylinum publication-title: Arch. Microbiol. doi: 10.1007/BF00446463 contributor: fullname: Dekker – volume: 173 start-page: 5371 year: 1991 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB6 article-title: Rhizobium lipopolysaccharide modulates infestion thread development in white cover root hairs publication-title: J. Bacteriol. doi: 10.1128/jb.173.17.5371-5384.1991 contributor: fullname: Dazzo – volume: 13 start-page: 207 year: 1992 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB3 article-title: Characterization of capsular antigens in Acetobacter diazotrophicus publication-title: Symbiosis contributor: fullname: Stephan – volume: 227 start-page: 680 year: 1970 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB10 article-title: Cleavage of structural proteins during the assembly of the head of bacteriophage T4 publication-title: Nature (Lond.) doi: 10.1038/227680a0 contributor: fullname: Laemmli – volume: 133 start-page: 685 year: 1983 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB16 article-title: Aberrant migration of lipopolysaccharides in sodium dodecyl sulfate polyacrylamide gel electrophoresis publication-title: Eur. J. Biochem. doi: 10.1111/j.1432-1033.1983.tb07517.x contributor: fullname: Hitchcock – volume: 154 start-page: 269 year: 1983 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB11 article-title: Morphological heterogeneity among Salmonella lipopolysaccharide chemotype in silver-stained polyacrylamide gels publication-title: J. Bacteriol. doi: 10.1128/JB.154.1.269-277.1983 contributor: fullname: Hitchcock – volume: 39 start-page: 361 year: 1989 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB2 article-title: Acetobacter diazotrophicus sp. nov, a nitrogen-fixing acetic acid bacterium associated with sugarcane publication-title: Int. J. Syst. Bacteriol. doi: 10.1099/00207713-39-3-361 contributor: fullname: Gillis – volume: 106 start-page: 105 year: 1993 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB8 article-title: Conformation of Escherichia coli outer membrane protein OmpA produced in Bacillus subtilis: influence of lipopolysaccharide publication-title: FEMS Microbiol. Lett. doi: 10.1111/j.1574-6968.1993.tb05942.x contributor: fullname: Puohiniemi – volume: 5 start-page: 83 year: 1965 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB9 article-title: Bacterial lipopolysaccharides: extraction with phenol-water and further applications of the procedure publication-title: Methods Carbohydr. Chem. contributor: fullname: Whestphal – volume: 220 start-page: 165 year: 1991 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB20 article-title: Structure of the capsular polysaccharide and the O-side chain of the lipopolysaccharide from Acetobacter methanolicus MB 58/4 (IMET 10945), and of oligosaccharides resulting from their degradation by the bacteriophage Acm 1 publication-title: Carbohydr. Res doi: 10.1016/0008-6215(91)80014-E contributor: fullname: Grimmecke – volume: 85 start-page: 595 year: 1978 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB12 article-title: A new and improved microassay to determine 2-keto-3-deoxyoctonate in lipopolysaccharide of Gram negative bacteria publication-title: Anal. Biochem. doi: 10.1016/0003-2697(78)90260-9 contributor: fullname: Karkhanis – volume: 50 start-page: 193 year: 1986 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB5 article-title: Signal exchange in plant-microbe interactions publication-title: Microbiol. Rev. doi: 10.1128/MMBR.50.2.193-225.1986 contributor: fullname: Halverson – volume: 151 start-page: 491 year: 1975 ident: 10.1111/j.1574-6968.1995.tb07808.x-BIB15 article-title: Characterisation by gas liquid chromatography-mass spectrometry and proton magnetic resonance spectroscopy of pertrimethylsilyl glycosides obtained in methanolysis of glycoproteins and glycolipids publication-title: Biochem. J. doi: 10.1042/bj1510491 contributor: fullname: Kamerling |
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| Snippet | Lipopolysaccharides from six nitrogen-fixing strains of Acetobacter diazotrophicus (PR2, PAL3, PAL5, PR4, PR14, PR20), isolated from sugarcane, were purified... Lipopolysaccharides from six nitrogen‐fixing strains of Acetobacter diazotrophicus (PR2, PAL3, PAL5, PR4, PR14, PR20), isolated from sugarcane, were purified... Lipopolysaccharides from six nitrogen-fixing strains of Acetobacter diazotrophicus (PR2, PAW, PALS, PR4, PR14, PR20), isolated from sugarcane, were purified by... |
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| SubjectTerms | 6‐Deoxy‐hexose Acetobacter Acetobacter diazotrophicus Bacteriology Biological and medical sciences chemical composition chemotaxonomy Fundamental and applied biological sciences. Psychology Life Sciences Lipopolysaccharide lipopolysaccharides Microbiology Morphology, structure, chemical composition nitrogen-fixing bacteria Ribose Saccharum officinarum strain differences strains Sugarcane |
| Title | Lipopolysaccharides from six strains of Acetobacter diazotrophicus |
| URI | https://onlinelibrary.wiley.com/doi/abs/10.1111%2Fj.1574-6968.1995.tb07808.x https://search.proquest.com/docview/16988563 https://pasteur.hal.science/pasteur-03165709 |
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