Angio-Net: deep learning-based label-free detection and morphometric analysis of in vitro angiogenesis

• Published in: Lab on a chip Vol. 24; no. 4; pp. 751 - 763
• Main Authors: Kim, Suryong, Lee, Jungseub, Ko, Jihoon, Park, Seonghyuk, Lee, Seung-Ryeol, Kim, Youngtaek, Lee, Taeseung, Choi, Sunbeen, Kim, Jiho, Kim, Wonbae, Chung, Yoojin, Kwon, Oh-Heum, Jeon, Noo Li
• Format: Journal Article
• Language: English
• Published: England Royal Society of Chemistry 13.02.2024
• Subjects: Angiogenesis; Blood vessels; Cell culture; Cell Culture Techniques; Data analysis; Deep Learning; Labels; Microfluidic devices; Quantitative analysis
• ISSN: 1473-0197; 1473-0189
• DOI: 10.1039/d3lc00935a

Despite significant advancements in three-dimensional (3D) cell culture technology and the acquisition of extensive data, there is an ongoing need for more effective and dependable data analysis methods. These concerns arise from the continued reliance on manual quantification techniques. In this study, we introduce a microphysiological system (MPS) that seamlessly integrates 3D cell culture to acquire large-scale imaging data and employs deep learning-based virtual staining for quantitative angiogenesis analysis. We utilize a standardized microfluidic device to obtain comprehensive angiogenesis data. Introducing Angio-Net, a novel solution that replaces conventional immunocytochemistry, we convert brightfield images into label-free virtual fluorescence images through the fusion of SegNet and cGAN. Moreover, we develop a tool capable of extracting morphological blood vessel features and automating their measurement, facilitating precise quantitative analysis. This integrated system proves to be invaluable for evaluating drug efficacy, including the assessment of anticancer drugs on targets such as the tumor microenvironment. Additionally, its unique ability to enable live cell imaging without the need for cell fixation promises to broaden the horizons of pharmaceutical and biological research. Our study pioneers a powerful approach to high-throughput angiogenesis analysis, marking a significant advancement in MPS.