Rapid Salmonella detection using an acoustic wave device combined with the RCA isothermal DNA amplification method

• Published in: Sensing and Bio-Sensing Research Vol. 11; pp. 121 - 127
• Main Authors: Kordas, Antonis, Papadakis, George, Milioni, Dimitra, Champ, Jerome, Descroix, Stephanie, Gizeli, Electra
• Format: Journal Article
• Language: English
• Published: Elsevier 01.12.2016
• ISSN: 2214-1804; 2214-1804
• DOI: 10.1016/j.sbsr.2016.10.010

Salmonella enterica serovar Typhimurium is a major foodborne pathogen that causes Salmonellosis, posing a serious threat for public health and economy; thus, the development of fast and sensitive methods is of paramount importance for food quality control and safety management. In the current work, we are presenting a new approach where an isothermal amplification method is combined with an acoustic wave device for the development of a label free assay for bacteria detection. Specifically, our method utilizes a Love wave biosensor based on a Surface Acoustic Wave (SAW) device combined with the isothermal Rolling Circle Amplification (RCA) method; various protocols were tested regarding the DNA amplification and detection, including off-chip amplification at two different temperatures (30 °C and room temperature) followed by acoustic detection and on-chip amplification and detection at room temperature, with the current detection limit being as little as 100 Bacteria Cell Equivalents (BCE)/sample. Our acoustic results showed that the acoustic ratio, i.e., the amplitude over phase change observed during DNA binding, provided the only sensitive means for product detection while the measurement of amplitude or phase alone could not discriminate positive from negative samples. The method's fast analysis time together with other inherent advantages i.e., portability, potential for multi-analysis, lower sample volumes and reduced power consumption, hold great promise for employing the developed assay in a Lab on Chip (LoC) platform for the integrated analysis of Salmonella in food samples. Keywords: Foodborne pathogen detection, Salmonella analysis, Rolling Circle Amplification, DNA biosensor, Lab-on-a-chip