ORFeome Phage Display

• Published in: Methods in molecular biology (Clifton, N.J.) Vol. 1701; p. 477
• Main Authors: Zantow, Jonas, Moreira, Gustavo Marçal Schmidt Garcia, Dübel, Stefan, Hust, Michael
• Format: Journal Article
• Language: English
• Published: United States 2018
• Subjects: Animals; Cloning, Molecular - methods; Gene Library; Humans; Immunoglobulins - genetics; Open Reading Frames; Peptide Library; Antigen; Open reading frame (ORF) selection; Genomic libraries; Biomarker identification; ORFeome phage display; cDNA libraries; Oligopeptide phage display; Immunogenic proteins
• ISSN: 1940-6029
• DOI: 10.1007/978-1-4939-7447-4_27

ORFeome phage display allows the efficient functional screening of entire proteomes or even metaproteomes to identify immunogenic proteins. For this purpose, randomly fragmented, whole genomes or metagenomes are cloned into a phage-display vector allowing positive selection for open reading frames (ORF) to improve the library quality. These libraries display all possible proteins encoded by a pathogen or a microbiome on the phage surface. Consequently, immunogenic proteins can be selected from these libraries using disease-related immunoglobulins from patient serum. ORFeome phage display in particular allows the identification of immunogenic proteins that are only expressed in the host-pathogen interaction but not in cultivation, as well as the detection of very low expressed and very small immunogens and immunogenic proteins of non-cultivable organisms. The identified immunogenic proteins are potential biomarkers for the development of diagnostic assays or vaccines. These articles will give an introduction to ORFeome phage-display technology and give detailed protocols to identify immunogenic proteins by phage display.