Structural insights into the Smirnoff-Wheeler pathway for vitamin C production in the Amazon fruit Camu-Camu
L-Ascorbic acid (AsA, vitamin C) is a pivotal dietary nutrient with multifaceted importance in living organisms. In plants, the Smirnoff-Wheeler (SW) pathway is the primary route for AsA biosynthesis and understanding the mechanistic details behind its component enzymes has implications for plant bi...
Saved in:
Published in | Journal of experimental botany Vol. 75; no. 9; pp. 2754 - 2771 |
---|---|
Main Authors | , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
England
03.05.2024
|
Subjects | |
Online Access | Get full text |
Cover
Loading…
Abstract | L-Ascorbic acid (AsA, vitamin C) is a pivotal dietary nutrient with multifaceted importance in living organisms. In plants, the Smirnoff-Wheeler (SW) pathway is the primary route for AsA biosynthesis and understanding the mechanistic details behind its component enzymes has implications for plant biology, nutritional science and biotechnology. As part of an initiative to determine the structures of all six core enzymes of the pathway, the present study focusses on three of them from the model system Myrciaria dubia (camu-camu): GDP-D-mannose 3',5'-epimerase (GME), L-galactose dehydrogenase (L-GalDH), and L-galactono-1,4-lactone dehydrogenase (L-GalLDH). We provide insights into substrate and cofactor binding and the conformational changes they induce. The MdGME structure reveals a distorted substrate in the active site, pertinent to the catalytic mechanism. MdL-GalDH shows that the way in which NAD+ association affects loop structure over the active site is not conserved when compared with its homologue from spinach. Finally, the structure of MdL-GalLDH is described for the first time. This allows for the rationalization of previously identified residues which play important roles in the active site or in the formation of the covalent bond with the FAD. In conclusion, this study enhances our understanding of AsA biosynthesis in plants and the information provided should prove useful for biotechnological applications. |
---|---|
AbstractList | l-Ascorbic acid (AsA, vitamin C) is a pivotal dietary nutrient with multifaceted importance in living organisms. In plants, the Smirnoff-Wheeler pathway is the primary route for AsA biosynthesis, and understanding the mechanistic details behind its component enzymes has implications for plant biology, nutritional science, and biotechnology. As part of an initiative to determine the structures of all six core enzymes of the pathway, the present study focuses on three of them in the model species Myrciaria dubia (camu-camu): GDP-d-mannose 3',5'-epimerase (GME), l-galactose dehydrogenase (l-GalDH), and l-galactono-1,4-lactone dehydrogenase (l-GalLDH). We provide insights into substrate and cofactor binding and the conformational changes they induce. The MdGME structure reveals a distorted substrate in the active site, pertinent to the catalytic mechanism. Mdl-GalDH shows that the way in which NAD+ association affects loop structure over the active site is not conserved when compared with its homologue in spinach. Finally, the structure of Mdl-GalLDH is described for the first time. This allows for the rationalization of previously identified residues which play important roles in the active site or in the formation of the covalent bond with FAD. In conclusion, this study enhances our understanding of AsA biosynthesis in plants, and the information provided should prove useful for biotechnological applications. L-Ascorbic acid (AsA, vitamin C) is a pivotal dietary nutrient with multifaceted importance in living organisms. In plants, the Smirnoff-Wheeler (SW) pathway is the primary route for AsA biosynthesis and understanding the mechanistic details behind its component enzymes has implications for plant biology, nutritional science and biotechnology. As part of an initiative to determine the structures of all six core enzymes of the pathway, the present study focusses on three of them from the model system Myrciaria dubia (camu-camu): GDP-D-mannose 3',5'-epimerase (GME), L-galactose dehydrogenase (L-GalDH), and L-galactono-1,4-lactone dehydrogenase (L-GalLDH). We provide insights into substrate and cofactor binding and the conformational changes they induce. The MdGME structure reveals a distorted substrate in the active site, pertinent to the catalytic mechanism. MdL-GalDH shows that the way in which NAD+ association affects loop structure over the active site is not conserved when compared with its homologue from spinach. Finally, the structure of MdL-GalLDH is described for the first time. This allows for the rationalization of previously identified residues which play important roles in the active site or in the formation of the covalent bond with the FAD. In conclusion, this study enhances our understanding of AsA biosynthesis in plants and the information provided should prove useful for biotechnological applications. Abstract l-Ascorbic acid (AsA, vitamin C) is a pivotal dietary nutrient with multifaceted importance in living organisms. In plants, the Smirnoff–Wheeler pathway is the primary route for AsA biosynthesis, and understanding the mechanistic details behind its component enzymes has implications for plant biology, nutritional science, and biotechnology. As part of an initiative to determine the structures of all six core enzymes of the pathway, the present study focuses on three of them in the model species Myrciaria dubia (camu-camu): GDP-d-mannose 3',5'-epimerase (GME), l-galactose dehydrogenase (l-GalDH), and l-galactono-1,4-lactone dehydrogenase (l-GalLDH). We provide insights into substrate and cofactor binding and the conformational changes they induce. The MdGME structure reveals a distorted substrate in the active site, pertinent to the catalytic mechanism. Mdl-GalDH shows that the way in which NAD+ association affects loop structure over the active site is not conserved when compared with its homologue in spinach. Finally, the structure of Mdl-GalLDH is described for the first time. This allows for the rationalization of previously identified residues which play important roles in the active site or in the formation of the covalent bond with FAD. In conclusion, this study enhances our understanding of AsA biosynthesis in plants, and the information provided should prove useful for biotechnological applications. |
Author | Pinto, Andressa P A Flores, Jhoao F Cobos, Marianela Vargas, Jhon A Mendes, Luis F S Sculaccio, Susana A Leonardo, Diego A Garratt, Richard C Castro, Juan C Pereira, Humberto D'Muniz |
Author_xml | – sequence: 1 givenname: Jhon A surname: Vargas fullname: Vargas, Jhon A organization: São Carlos Institute of Physics, University of São Paulo, Avenida João Dagnone 1100, São Carlos, SP 13563-120, Brazil – sequence: 2 givenname: Susana A surname: Sculaccio fullname: Sculaccio, Susana A organization: São Carlos Institute of Physics, University of São Paulo, Avenida João Dagnone 1100, São Carlos, SP 13563-120, Brazil – sequence: 3 givenname: Andressa P A surname: Pinto fullname: Pinto, Andressa P A organization: São Carlos Institute of Physics, University of São Paulo, Avenida João Dagnone 1100, São Carlos, SP 13563-120, Brazil – sequence: 4 givenname: Humberto D'Muniz surname: Pereira fullname: Pereira, Humberto D'Muniz organization: São Carlos Institute of Physics, University of São Paulo, Avenida João Dagnone 1100, São Carlos, SP 13563-120, Brazil – sequence: 5 givenname: Luis F S surname: Mendes fullname: Mendes, Luis F S organization: São Carlos Institute of Physics, University of São Paulo, Avenida João Dagnone 1100, São Carlos, SP 13563-120, Brazil – sequence: 6 givenname: Jhoao F surname: Flores fullname: Flores, Jhoao F organization: Institute of Biology, State University of Campinas, Rua Monteiro Lobato 255, Campinas, SP 13083-862, Brazil – sequence: 7 givenname: Marianela orcidid: 0000-0002-2935-2830 surname: Cobos fullname: Cobos, Marianela organization: Departamento de Ciencias Biomédicas y Biotecnología, Facultad de Ciencias Biológicas, Universidad Nacional de la Amazonia Peruana (UNAP), Zungarococha, Ciudad Universitaria. Iquitos, Perú – sequence: 8 givenname: Juan C surname: Castro fullname: Castro, Juan C organization: Departamento de Ciencias Biomédicas y Biotecnología, Facultad de Ciencias Biológicas, Universidad Nacional de la Amazonia Peruana (UNAP), Zungarococha, Ciudad Universitaria. Iquitos, Perú – sequence: 9 givenname: Richard C surname: Garratt fullname: Garratt, Richard C organization: São Carlos Institute of Physics, University of São Paulo, Avenida João Dagnone 1100, São Carlos, SP 13563-120, Brazil – sequence: 10 givenname: Diego A surname: Leonardo fullname: Leonardo, Diego A organization: São Carlos Institute of Physics, University of São Paulo, Avenida João Dagnone 1100, São Carlos, SP 13563-120, Brazil |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/38224521$$D View this record in MEDLINE/PubMed |
BookMark | eNo9kEtPwzAQhC1URFvgxB35iIQCfibxEVW8pEocAHGMnGRNXOVRbAcovx4XCpfZXWlmtPrmaNIPPSB0QskFJYpfrj7LS3AaCE330IyKlCRMcDpBM0IYS4iS2RTNvV8RQiSR8gBNec6YkIzOUPsY3FiF0ekW297b1yb4uIQBhwbwY2ddPxiTvDQALTi81qH50BtsBoffbdCd7fECr91QxxI79DH6E7zq9Fe8jBttwAvdjclWjtC-0a2H4908RM8310-Lu2T5cHu_uFomFRNZSIQsIZd5rUTNy7o2KuNGKVB1mmlWZTUxTOVRiWACqqyspABNjeFgTErKlB-is9_e-NjbCD4UnfUVtK3uYRh9wRSVMiO54NF6_mut3OC9A1Osne202xSUFFu8RcRb7PBG9-mueCw7qP-9fzz5N9ZSewA |
Cites_doi | 10.1016/j.abb.2017.06.022 10.1021/bi701886t 10.1007/s00425-011-1525-6 10.1016/j.bbagen.2018.01.009 10.7554/eLife.06369 10.1093/pcp/pch152 10.1107/S010876731809640X 10.1016/j.jmb.2007.05.022 10.1093/oxfordjournals.jbchem.a133467 10.1146/annurev-nutr-071714-034228 10.3389/fpls.2018.02006 10.1016/B978-0-12-803138-4.00014-9 10.1007/s00299-011-1009-y 10.1080/10408398.2020.1712674 10.1016/j.biopha.2022.114093 10.1042/BJ20070766 10.1021/ja056490i 10.1016/S0969-2126(97)00245-1 10.1007/s11240-008-9466-x 10.1186/s12864-020-07311-5 10.1038/s41467-020-18814-w 10.1002/pro.4519 10.1371/journal.pone.0125870 10.3390/plants10071291 10.1016/B978-0-323-90256-4.00016-3 10.3389/fpls.2023.1099829 10.1016/j.abb.2008.01.027 10.1038/s41586-021-03819-2 10.1016/j.tplants.2004.10.002 10.1074/jbc.M808202200 10.1007/s11103-016-0525-0 10.3389/fmolb.2021.784142 10.1073/pnas.0701625104 10.1104/pp.109.136929 10.1016/j.bbrep.2016.11.017 10.1038/s41592-022-01488-1 10.1111/odi.12446 10.1007/s11693-010-9062-3 10.1111/j.1742-4658.2007.06233.x 10.1074/jbc.M805538200 10.1016/j.plaphy.2015.11.017 10.1107/S0021889807021206 10.1042/bj3260625 10.1016/S0167-7799(02)01991-1 10.1016/j.biochi.2022.05.006 10.1186/s12864-015-2225-6 10.1016/S0968-0004(99)01533-9 10.1093/pcp/pcac090 10.1107/S0907444904019158 10.1017/S003358351000003X 10.1021/acsomega.2c07245 10.1073/pnas.0407453101 10.1074/jbc.M309135200 10.1007/s00299-010-0939-0 10.1110/ps.12801 10.1016/S0968-0004(98)01210-9 10.1093/jxb/ern327 10.1038/30728 10.1073/pnas.011578198 10.1016/j.freeradbiomed.2018.03.033 10.1046/j.1365-313X.2002.01315.x 10.1073/pnas.96.7.4198 10.1016/j.bbapap.2011.03.001 10.1107/S0907444909052925 10.1016/S0167-4838(00)00234-X 10.1016/j.febslet.2009.09.004 10.1074/jbc.272.48.30009 10.1074/jbc.M111.305144 |
ContentType | Journal Article |
Copyright | The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com. |
Copyright_xml | – notice: The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com. |
DBID | NPM AAYXX CITATION 7X8 |
DOI | 10.1093/jxb/erae016 |
DatabaseName | PubMed CrossRef MEDLINE - Academic |
DatabaseTitle | PubMed CrossRef MEDLINE - Academic |
DatabaseTitleList | MEDLINE - Academic PubMed CrossRef |
Database_xml | – sequence: 1 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Botany |
EISSN | 1460-2431 |
Editor | Smirnoff, Nick |
Editor_xml | – sequence: 1 givenname: Nick surname: Smirnoff fullname: Smirnoff, Nick |
EndPage | 2771 |
ExternalDocumentID | 10_1093_jxb_erae016 38224521 |
Genre | Journal Article |
GroupedDBID | --- -DZ -E4 -~X .2P .I3 0R~ 18M 1TH 29K 2WC 4.4 482 48X 5GY 5VS 5WA 5WD 70D AAHBH AAIMJ AAJKP AAMDB AAMVS AAOGV AAPQZ AAPXW AARHZ AAUAY AAVAP AAVLN AAXTN ABEJV ABEUO ABIXL ABJNI ABLJU ABMNT ABNKS ABPPZ ABPTD ABQLI ABWST ABXVV ABZBJ ACGFO ACGFS ACGOD ACIWK ACNCT ACPRK ACUFI ADBBV ADEYI ADEZT ADFTL ADGKP ADGZP ADHKW ADHZD ADIPN ADOCK ADQBN ADRIX ADRTK ADVEK ADYVW ADZTZ ADZXQ AEEJZ AEGPL AEGXH AEJOX AEKSI AELWJ AEMDU AENEX AENZO AEPUE AETBJ AEWNT AFFZL AFGWE AFIYH AFOFC AFRAH AFXEN AGINJ AGKEF AGQXC AGSYK AHMBA AHXPO AIAGR AIJHB AJEEA AKHUL AKWXX ALMA_UNASSIGNED_HOLDINGS ALUQC APIBT APWMN ARIXL ATGXG AXUDD AYOIW BAWUL BAYMD BCRHZ BEYMZ BHONS BQDIO BSWAC CDBKE CS3 CZ4 D-I DAKXR DILTD DU5 D~K E3Z EBS EE~ ESX F5P F9B FHSFR FLUFQ FOEOM FQBLK GAUVT GJXCC GX1 H5~ HAR HW0 HZ~ IOX J21 JXSIZ KAQDR KOP KQ8 KSI KSN M-Z M49 N9A NGC NLBLG NOMLY NPM NU- O9- OAWHX OBOKY ODMLO OJQWA OJZSN OK1 OWPYF P2P PAFKI PEELM PQQKQ Q1. Q5Y R44 RD5 RIG ROL ROX RUSNO RW1 RXO TLC TN5 TR2 UHB UPT WH7 WOQ X7H YAYTL YKOAZ YQT YXANX YZZ ZKX ~02 ~91 ~KM AASNB AAYXX CITATION 7X8 |
ID | FETCH-LOGICAL-c247t-45be858d94d3bddf973f99e9d67a2c7d0f298d0f0424ec7bc54ea1ff3eff60b63 |
ISSN | 0022-0957 |
IngestDate | Sat Oct 26 05:30:04 EDT 2024 Thu Sep 12 19:40:25 EDT 2024 Sat Nov 02 12:15:58 EDT 2024 |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 9 |
Keywords | L-galactono-1 5'-epimerase camu-camu 4-lactone dehydrogenase L-ascorbic acid vitamin C Smirnoff-Wheeler pathway Myrciaria dubia L-galactose dehydrogenase enzyme structure GDP-D-mannose 3 |
Language | English |
License | The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com. |
LinkModel | OpenURL |
MergedId | FETCHMERGED-LOGICAL-c247t-45be858d94d3bddf973f99e9d67a2c7d0f298d0f0424ec7bc54ea1ff3eff60b63 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
ORCID | 0000-0002-2935-2830 0000-0002-2237-421X 0000-0003-0794-3178 0000-0003-2657-0274 0000-0002-2016-3179 0000-0002-8652-6729 0000-0002-0362-4172 0000-0002-4946-1807 0009-0008-1495-4813 0000-0003-4264-3074 |
PMID | 38224521 |
PQID | 2915570843 |
PQPubID | 23479 |
PageCount | 18 |
ParticipantIDs | proquest_miscellaneous_2915570843 crossref_primary_10_1093_jxb_erae016 pubmed_primary_38224521 |
PublicationCentury | 2000 |
PublicationDate | 2024-05-03 |
PublicationDateYYYYMMDD | 2024-05-03 |
PublicationDate_xml | – month: 05 year: 2024 text: 2024-05-03 day: 03 |
PublicationDecade | 2020 |
PublicationPlace | England |
PublicationPlace_xml | – name: England |
PublicationTitle | Journal of experimental botany |
PublicationTitleAlternate | J Exp Bot |
PublicationYear | 2024 |
References | Castro (2024050309502546800_CIT0007) 2023; 14 Hancock (2024050309502546800_CIT0024) 2002; 20 Laing (2024050309502546800_CIT0032) 2007; 104 Major (2024050309502546800_CIT0041) 2005; 127 Krissinel (2024050309502546800_CIT0029) 2007; 372 Conklin (2024050309502546800_CIT0011) 1999; 96 Nur (2024050309502546800_CIT0050) 2021; 61 Wolucka (2024050309502546800_CIT0067) 2003; 278 Schertl (2024050309502546800_CIT0056) 2012; 287 Laing (2024050309502546800_CIT0031) 2004; 101 Zhang (2024050309502546800_CIT0069) 2011; 30 Gatzek (2024050309502546800_CIT0022) 2002; 30 Holm (2024050309502546800_CIT0025) 2023; 32 Mattevi (2024050309502546800_CIT0043) 1997; 5 Mieda (2024050309502546800_CIT0046) 2004; 45 Adams (2024050309502546800_CIT0002) 2010; 66 Leferink (2024050309502546800_CIT0033) 2009; 284 Leferink (2024050309502546800_CIT0036) 2008; 275 Padayatty (2024050309502546800_CIT0053) 2016; 22 Logan (2024050309502546800_CIT0040) 2007; 407 Gonzalez (2024050309502546800_CIT0023) 2023 Vargas (2024050309502546800_CIT0060) 2022; 63 Castro (2024050309502546800_CIT0009) 2018; 2018 Raab (2024050309502546800_CIT0054) 2010; 4 Young (2024050309502546800_CIT0068) 2015; 35 Dym (2024050309502546800_CIT0013) 2001; 10 Wheeler (2024050309502546800_CIT0064) 2015; 4 Leferink (2024050309502546800_CIT0034) 2008; 474 Soufari (2024050309502546800_CIT0058) 2020; 11 Wallace (2024050309502546800_CIT0062) 2009; 42 Sampaio (2024050309502546800_CIT0055) 2022; 200 García-Chacón (2024050309502546800_CIT0021) 2023; 8 Bulley (2024050309502546800_CIT0005) 2009; 60 Mendes (2024050309502546800_CIT0045) 2018; 1862 Wheeler (2024050309502546800_CIT0065) 1998; 393 Fraaije (2024050309502546800_CIT0019) 1998; 23 Valpuesta (2024050309502546800_CIT0059) 2004; 9 Caruso (2024050309502546800_CIT0006) 2021; 10 Bedhiafi (2024050309502546800_CIT0003) 2023; 158 Maruta (2024050309502546800_CIT0042) 2008; 283 Leferink (2024050309502546800_CIT0037) 2009; 150 Liao (2024050309502546800_CIT0039) 2021; 22 Emsley (2024050309502546800_CIT0014) 2004; 60 Jez (2024050309502546800_CIT0027) 1997; 326 Ewing (2024050309502546800_CIT0015) 2017; 632 Imai (2024050309502546800_CIT0026) 2009; 96 Mirdita (2024050309502546800_CIT0047) 2022; 19 Jumper (2024050309502546800_CIT0028) 2021; 596 Li (2024050309502546800_CIT0038) 2016; 92 Smirnoff (2024050309502546800_CIT0057) 2018; 122 Wolucka (2024050309502546800_CIT0066) 2001; 98 Østergaard (2024050309502546800_CIT0052) 1997; 272 Beerens (2024050309502546800_CIT0004) 2022; 8 Moore (2024050309502546800_CIT0048) 2023; 15 Castro (2024050309502546800_CIT0008) 2015; 16 Noguchi (2024050309502546800_CIT0049) 1981; 90 Cronje (2024050309502546800_CIT0012) 2012; 235 Zhang (2024050309502546800_CIT0070) 2022; 13 Forneris (2024050309502546800_CIT0017) 2008; 47 Vonrhein (2024050309502546800_CIT0061) 2018; 74 Wang (2024050309502546800_CIT0063) 2011; 30 Aboobucker (2024050309502546800_CIT0001) 2016; 98 Zhou (2024050309502546800_CIT0072) 2012 Zhang (2024050309502546800_CIT0071) 2015; 10 Ôba (2024050309502546800_CIT0051) 1995; 117 Ganesh (2024050309502546800_CIT0020) 2017; 9 Chotani (2024050309502546800_CIT0010) 2000; 1543 Fenech (2024050309502546800_CIT0016) 2019; 9 Fraaije (2024050309502546800_CIT0018) 2000; 25 Kudryashova (2024050309502546800_CIT0030) 2011; 1814 McCoy (2024050309502546800_CIT0044) 2007; 40 Leferink (2024050309502546800_CIT0035) 2009; 583 |
References_xml | – volume: 632 start-page: 104 year: 2017 ident: 2024050309502546800_CIT0015 article-title: The VAO/PCMH flavoprotein family publication-title: Archives of Biochemistry and Biophysics doi: 10.1016/j.abb.2017.06.022 contributor: fullname: Ewing – volume: 47 start-page: 978 year: 2008 ident: 2024050309502546800_CIT0017 article-title: Structural analysis of the catalytic mechanism and stereoselectivity in Streptomyces coelicolor alditol oxidase publication-title: Biochemistry doi: 10.1021/bi701886t contributor: fullname: Forneris – volume: 235 start-page: 553 year: 2012 ident: 2024050309502546800_CIT0012 article-title: Manipulation of publication-title: Planta doi: 10.1007/s00425-011-1525-6 contributor: fullname: Cronje – volume: 1862 start-page: 855 year: 2018 ident: 2024050309502546800_CIT0045 article-title: Disorder-to-order transitions in the molten globule-like Golgi reassembly and stacking protein publication-title: Biochimica et Biophysica Acta doi: 10.1016/j.bbagen.2018.01.009 contributor: fullname: Mendes – volume: 4 start-page: e06369 year: 2015 ident: 2024050309502546800_CIT0064 article-title: Evolution of alternative biosynthetic pathways for vitamin C following plastid acquisition in photosynthetic eukaryotes publication-title: eLife doi: 10.7554/eLife.06369 contributor: fullname: Wheeler – volume: 45 start-page: 1271 year: 2004 ident: 2024050309502546800_CIT0046 article-title: Feedback inhibition of spinach publication-title: Plant and Cell Physiology doi: 10.1093/pcp/pch152 contributor: fullname: Mieda – volume: 74 start-page: a360 year: 2018 ident: 2024050309502546800_CIT0061 article-title: Advances in automated data analysis and processing within autoPROC, combined with improved characterisation, mitigation and visualisation of the anisotropy of diffraction limits using STARANISO publication-title: Acta Crystallographica Section A Foundations and Advances doi: 10.1107/S010876731809640X contributor: fullname: Vonrhein – volume: 372 start-page: 774 year: 2007 ident: 2024050309502546800_CIT0029 article-title: Inference of macromolecular assemblies from crystalline state publication-title: Journal of Molecular Biology doi: 10.1016/j.jmb.2007.05.022 contributor: fullname: Krissinel – volume: 90 start-page: 33 year: 1981 ident: 2024050309502546800_CIT0049 article-title: Studies on the sulfhydryl group of publication-title: Journal of Biochemistry doi: 10.1093/oxfordjournals.jbchem.a133467 contributor: fullname: Noguchi – volume: 35 start-page: 545 year: 2015 ident: 2024050309502546800_CIT0068 article-title: Regulation of the epigenome by vitamin C publication-title: Annual Review of Nutrition doi: 10.1146/annurev-nutr-071714-034228 contributor: fullname: Young – volume: 9 start-page: 2006 year: 2019 ident: 2024050309502546800_CIT0016 article-title: Vitamin C content in fruits: biosynthesis and regulation publication-title: Frontiers in Plant Science doi: 10.3389/fpls.2018.02006 contributor: fullname: Fenech – volume: 2018 start-page: 97 year: 2018 ident: 2024050309502546800_CIT0009 article-title: Camu-camu—Myrciaria dubia (Kunth) McVaugh publication-title: Exotic Fruits doi: 10.1016/B978-0-12-803138-4.00014-9 contributor: fullname: Castro – volume: 30 start-page: 1029 year: 2011 ident: 2024050309502546800_CIT0063 article-title: Overexpression in tobacco of a tomato GMPase gene improves tolerance to both low and high temperature stress by enhancing antioxidation capacity publication-title: Plant Cell Reports doi: 10.1007/s00299-011-1009-y contributor: fullname: Wang – volume: 61 start-page: 1 year: 2021 ident: 2024050309502546800_CIT0050 article-title: Nutritive vitamins as epidrugs publication-title: Critical Reviews in Food Science and Nutrition doi: 10.1080/10408398.2020.1712674 contributor: fullname: Nur – volume: 158 start-page: 114093 year: 2023 ident: 2024050309502546800_CIT0003 article-title: Nano-vitamin C: a promising candidate for therapeutic applications publication-title: Biomedicine & Pharmacotherapy doi: 10.1016/j.biopha.2022.114093 contributor: fullname: Bedhiafi – volume: 407 start-page: 419 year: 2007 ident: 2024050309502546800_CIT0040 article-title: The terminal step in vitamin C biosynthesis in Trypanosoma cruzi is mediated by a FMN-dependent galactonolactone oxidase publication-title: The Biochemical Journal doi: 10.1042/BJ20070766 contributor: fullname: Logan – volume: 127 start-page: 18309 year: 2005 ident: 2024050309502546800_CIT0041 article-title: Structure and function of GDP-mannose-3',5'-epimerase: an enzyme which performs three chemical reactions at the same active site publication-title: Journal of the American Chemical Society doi: 10.1021/ja056490i contributor: fullname: Major – volume: 5 start-page: 907 year: 1997 ident: 2024050309502546800_CIT0043 article-title: Crystal structures and inhibitor binding in the octameric flavoenzyme vanillyl-alcohol oxidase: the shape of the active-site cavity controls substrate specificity publication-title: Structure doi: 10.1016/S0969-2126(97)00245-1 contributor: fullname: Mattevi – volume: 96 start-page: 105 year: 2009 ident: 2024050309502546800_CIT0026 article-title: Importance of the publication-title: Plant Cell, Tissue and Organ Culture doi: 10.1007/s11240-008-9466-x contributor: fullname: Imai – volume: 22 start-page: 13 year: 2021 ident: 2024050309502546800_CIT0039 article-title: Three metabolic pathways are responsible for the accumulation and maintenance of high AsA content in kiwifruit (Actinidia eriantha) publication-title: BMC Genomics doi: 10.1186/s12864-020-07311-5 contributor: fullname: Liao – volume: 11 start-page: 5195 year: 2020 ident: 2024050309502546800_CIT0058 article-title: Specific features and assembly of the plant mitochondrial complex I revealed by cryo-EM publication-title: Nature Communications doi: 10.1038/s41467-020-18814-w contributor: fullname: Soufari – volume: 15 start-page: e33740 year: 2023 ident: 2024050309502546800_CIT0048 article-title: The role of vitamin C in human immunity and its treatment potential against COVID-19: a review article publication-title: Cureus contributor: fullname: Moore – volume: 32 start-page: e4519 year: 2023 ident: 2024050309502546800_CIT0025 article-title: DALI shines a light on remote homologs: one hundred discoveries publication-title: Protein Science doi: 10.1002/pro.4519 contributor: fullname: Holm – volume: 10 start-page: e0125870 year: 2015 ident: 2024050309502546800_CIT0071 article-title: Manipulation of the rice publication-title: PLoS One doi: 10.1371/journal.pone.0125870 contributor: fullname: Zhang – volume: 10 start-page: 1291 year: 2021 ident: 2024050309502546800_CIT0006 article-title: A transcriptional analysis of the genes involved in the ascorbic acid pathways based on a comparison of the juice and leaves of navel and anthocyanin-rich sweet orange varieties publication-title: Plants doi: 10.3390/plants10071291 contributor: fullname: Caruso – start-page: 225 volume-title: Molecular nutrition and mitochondria year: 2023 ident: 2024050309502546800_CIT0023 article-title: Vitamin C and mitochondrial function in health and exercise doi: 10.1016/B978-0-323-90256-4.00016-3 contributor: fullname: Gonzalez – volume: 14 start-page: 1099829 year: 2023 ident: 2024050309502546800_CIT0007 article-title: Genetic and biochemical strategies for regulation of publication-title: Frontiers in Plant Science doi: 10.3389/fpls.2023.1099829 contributor: fullname: Castro – volume: 474 start-page: 292 year: 2008 ident: 2024050309502546800_CIT0034 article-title: The growing VAO flavoprotein family publication-title: Archives of Biochemistry and Biophysics doi: 10.1016/j.abb.2008.01.027 contributor: fullname: Leferink – volume: 596 start-page: 583 year: 2021 ident: 2024050309502546800_CIT0028 article-title: Highly accurate protein structure prediction with AlphaFold publication-title: Nature doi: 10.1038/s41586-021-03819-2 contributor: fullname: Jumper – volume: 9 start-page: 573 year: 2004 ident: 2024050309502546800_CIT0059 article-title: Biosynthesis of publication-title: Trends in Plant Science doi: 10.1016/j.tplants.2004.10.002 contributor: fullname: Valpuesta – volume: 284 start-page: 4392 year: 2009 ident: 2024050309502546800_CIT0033 article-title: Identification of a gatekeeper residue that prevents dehydrogenases from acting as oxidases publication-title: Journal of Biological Chemistry doi: 10.1074/jbc.M808202200 contributor: fullname: Leferink – volume: 92 start-page: 473 year: 2016 ident: 2024050309502546800_CIT0038 article-title: D27E mutation of VTC1 impairs the interaction with CSN5B and enhances ascorbic acid biosynthesis and seedling growth in Arabidopsis publication-title: Plant Molecular Biology doi: 10.1007/s11103-016-0525-0 contributor: fullname: Li – volume: 8 start-page: 784142 year: 2022 ident: 2024050309502546800_CIT0004 article-title: GDP-mannose 3,5-epimerase: a view on structure, mechanism, and industrial potential publication-title: Frontiers in Molecular Biosciences doi: 10.3389/fmolb.2021.784142 contributor: fullname: Beerens – volume: 104 start-page: 9534 year: 2007 ident: 2024050309502546800_CIT0032 article-title: The missing step of the publication-title: Proceedings of the National Academy of Sciences, USA doi: 10.1073/pnas.0701625104 contributor: fullname: Laing – volume: 150 start-page: 596 year: 2009 ident: 2024050309502546800_CIT0037 article-title: Galactonolactone dehydrogenase requires a redox-sensitive thiol for optimal production of vitamin C publication-title: Plant Physiology doi: 10.1104/pp.109.136929 contributor: fullname: Leferink – volume: 9 start-page: 121 year: 2017 ident: 2024050309502546800_CIT0020 article-title: Dynamic approach to predict pH profiles of biologically relevant buffers publication-title: Biochemistry and Biophysics Reports doi: 10.1016/j.bbrep.2016.11.017 contributor: fullname: Ganesh – volume: 19 start-page: 679 year: 2022 ident: 2024050309502546800_CIT0047 article-title: ColabFold: making protein folding accessible to all publication-title: Nature Methods doi: 10.1038/s41592-022-01488-1 contributor: fullname: Mirdita – volume: 22 start-page: 463 year: 2016 ident: 2024050309502546800_CIT0053 article-title: Vitamin C: the known and the unknown and Goldilocks publication-title: Oral Diseases doi: 10.1111/odi.12446 contributor: fullname: Padayatty – volume: 4 start-page: 215 year: 2010 ident: 2024050309502546800_CIT0054 article-title: The GeneOptimizer Algorithm: using a sliding window approach to cope with the vast sequence space in multiparameter DNA sequence optimization publication-title: Systems and Synthetic Biology doi: 10.1007/s11693-010-9062-3 contributor: fullname: Raab – volume: 275 start-page: 713 year: 2008 ident: 2024050309502546800_CIT0036 article-title: l-Galactono-γ-lactone dehydrogenase from Arabidopsis thaliana, a flavoprotein involved in vitamin C biosynthesis publication-title: The FEBS Journal doi: 10.1111/j.1742-4658.2007.06233.x contributor: fullname: Leferink – volume: 283 start-page: 28842 year: 2008 ident: 2024050309502546800_CIT0042 article-title: Arabidopsis phosphomannose isomerase 1, but not phosphomannose isomerase 2, is essential for ascorbic acid biosynthesis publication-title: Journal of Biological Chemistry doi: 10.1074/jbc.M805538200 contributor: fullname: Maruta – volume: 98 start-page: 171 year: 2016 ident: 2024050309502546800_CIT0001 article-title: Recent progress on the characterization of aldonolactone oxidoreductases publication-title: Plant Physiology and Biochemistry doi: 10.1016/j.plaphy.2015.11.017 contributor: fullname: Aboobucker – volume: 40 start-page: 658 year: 2007 ident: 2024050309502546800_CIT0044 article-title: Phaser crystallographic software publication-title: Journal of Applied Crystallography doi: 10.1107/S0021889807021206 contributor: fullname: McCoy – volume: 326 start-page: 625 year: 1997 ident: 2024050309502546800_CIT0027 article-title: Comparative anatomy of the aldo–keto reductase superfamily publication-title: The Biochemical Journal doi: 10.1042/bj3260625 contributor: fullname: Jez – volume: 20 start-page: 299 year: 2002 ident: 2024050309502546800_CIT0024 article-title: Biotechnological approaches for publication-title: Trends in Biotechnology doi: 10.1016/S0167-7799(02)01991-1 contributor: fullname: Hancock – volume: 200 start-page: 36 year: 2022 ident: 2024050309502546800_CIT0055 article-title: Modulation of beta-amyloid aggregation using ascorbic acid publication-title: Biochimie doi: 10.1016/j.biochi.2022.05.006 contributor: fullname: Sampaio – volume: 16 start-page: 997 year: 2015 ident: 2024050309502546800_CIT0008 article-title: De novo assembly and functional annotation of Myrciaria dubia fruit transcriptome reveals multiple metabolic pathways for publication-title: BMC Genomics doi: 10.1186/s12864-015-2225-6 contributor: fullname: Castro – volume: 25 start-page: 126 year: 2000 ident: 2024050309502546800_CIT0018 article-title: Flavoenzymes: diverse catalysts with recurrent features publication-title: Trends in Biochemical Sciences doi: 10.1016/S0968-0004(99)01533-9 contributor: fullname: Fraaije – volume: 63 start-page: 1140 year: 2022 ident: 2024050309502546800_CIT0060 article-title: Structural characterization of publication-title: Plant and Cell Physiology doi: 10.1093/pcp/pcac090 contributor: fullname: Vargas – volume: 13 start-page: 13 year: 2022 ident: 2024050309502546800_CIT0070 article-title: Crystal structures of Arabidopsis thaliana GDP-d-mannose pyrophosphorylase VITAMIN C DEFECTIVE publication-title: Frontiers in Plant Science contributor: fullname: Zhang – volume: 60 start-page: 2126 year: 2004 ident: 2024050309502546800_CIT0014 article-title: Coot: model-building tools for molecular graphics publication-title: Acta Crystallographica Section D Biological Crystallography doi: 10.1107/S0907444904019158 contributor: fullname: Emsley – volume: 42 start-page: 317 year: 2009 ident: 2024050309502546800_CIT0062 article-title: Protein characterisation by synchrotron radiation circular dichroism spectroscopy publication-title: Quarterly Reviews of Biophysics doi: 10.1017/S003358351000003X contributor: fullname: Wallace – volume: 8 start-page: 5169 year: 2023 ident: 2024050309502546800_CIT0021 article-title: Camu Camu (Myrciaria dubia (Kunth) McVaugh): an Amazonian fruit with biofunctional properties—a review publication-title: ACS Omega doi: 10.1021/acsomega.2c07245 contributor: fullname: García-Chacón – volume: 101 start-page: 16976 year: 2004 ident: 2024050309502546800_CIT0031 article-title: A highly specific publication-title: Proceedings of the National Academy of Sciences, USA doi: 10.1073/pnas.0407453101 contributor: fullname: Laing – volume: 278 start-page: 47483 year: 2003 ident: 2024050309502546800_CIT0067 article-title: GDP-mannose 3ʹ,5ʹ-epimerase forms GDP-l-gulose, a putative intermediate for the de novo biosynthesis of vitamin C in plants publication-title: Journal of Biological Chemistry doi: 10.1074/jbc.M309135200 contributor: fullname: Wolucka – volume: 30 start-page: 389 year: 2011 ident: 2024050309502546800_CIT0069 article-title: Overexpression of SlGMEs leads to ascorbate accumulation with enhanced oxidative stress, cold, and salt tolerance in tomato publication-title: Plant Cell Reports doi: 10.1007/s00299-010-0939-0 contributor: fullname: Zhang – volume: 10 start-page: 1712 year: 2001 ident: 2024050309502546800_CIT0013 article-title: Sequence–structure analysis of FAD-containing proteins publication-title: Protein Science doi: 10.1110/ps.12801 contributor: fullname: Dym – volume: 23 start-page: 206 year: 1998 ident: 2024050309502546800_CIT0019 article-title: A novel oxidoreductase family sharing a conserved FAD-binding domain publication-title: Trends in Biochemical Sciences doi: 10.1016/S0968-0004(98)01210-9 contributor: fullname: Fraaije – volume: 60 start-page: 765 year: 2009 ident: 2024050309502546800_CIT0005 article-title: Gene expression studies in kiwifruit and gene over-expression in Arabidopsis indicates that GDP-l-galactose guanyltransferase is a major control point of vitamin C biosynthesis publication-title: Journal of Experimental Botany doi: 10.1093/jxb/ern327 contributor: fullname: Bulley – volume: 393 start-page: 365 year: 1998 ident: 2024050309502546800_CIT0065 article-title: The biosynthetic pathway of vitamin C in higher plants publication-title: Nature doi: 10.1038/30728 contributor: fullname: Wheeler – volume: 98 start-page: 14843 year: 2001 ident: 2024050309502546800_CIT0066 article-title: Partial purification and identification of GDP-mannose 3'',5''-epimerase of Arabidopsis thaliana, a key enzyme of the plant vitamin C pathway publication-title: Proceedings of the National Academy of Sciences, USA doi: 10.1073/pnas.011578198 contributor: fullname: Wolucka – volume: 122 start-page: 116 year: 2018 ident: 2024050309502546800_CIT0057 article-title: Ascorbic acid metabolism and functions: a comparison of plants and mammals publication-title: Free Radical Biology and Medicine doi: 10.1016/j.freeradbiomed.2018.03.033 contributor: fullname: Smirnoff – volume: 30 start-page: 541 year: 2002 ident: 2024050309502546800_CIT0022 article-title: Antisense suppression of publication-title: The Plant Journal doi: 10.1046/j.1365-313X.2002.01315.x contributor: fullname: Gatzek – volume: 96 start-page: 4198 year: 1999 ident: 2024050309502546800_CIT0011 article-title: Genetic evidence for the role of GDP-mannose in plant ascorbic acid (vitamin C) biosynthesis publication-title: Proceedings of the National Academy of Sciences, USA doi: 10.1073/pnas.96.7.4198 contributor: fullname: Conklin – volume: 1814 start-page: 545 year: 2011 ident: 2024050309502546800_CIT0030 article-title: Galactonolactone oxidoreductase from Trypanosoma cruzi employs a FAD cofactor for the synthesis of vitamin C publication-title: Biochimica et Biophysica Acta doi: 10.1016/j.bbapap.2011.03.001 contributor: fullname: Kudryashova – start-page: 241 volume-title: Subcellular Biochemistry year: 2012 ident: 2024050309502546800_CIT0072 article-title: Metabolic engineering of microorganisms for vitamin C production contributor: fullname: Zhou – volume: 66 start-page: 213 year: 2010 ident: 2024050309502546800_CIT0002 article-title: PHENIX: a comprehensive Python-based system for macromolecular structure solution publication-title: Acta Crystallographica Section D Biological Crystallography doi: 10.1107/S0907444909052925 contributor: fullname: Adams – volume: 1543 start-page: 434 year: 2000 ident: 2024050309502546800_CIT0010 article-title: The commercial production of chemicals using pathway engineering publication-title: Biochimica et Biophysica Acta doi: 10.1016/S0167-4838(00)00234-X contributor: fullname: Chotani – volume: 583 start-page: 3199 year: 2009 ident: 2024050309502546800_CIT0035 article-title: Functional assignment of Glu386 and Arg388 in the active site of publication-title: FEBS Letters doi: 10.1016/j.febslet.2009.09.004 contributor: fullname: Leferink – volume: 272 start-page: 30009 year: 1997 ident: 2024050309502546800_CIT0052 article-title: Isolation of a cDNA coding for publication-title: Journal of Biological Chemistry doi: 10.1074/jbc.272.48.30009 contributor: fullname: Østergaard – volume: 117 start-page: 120 year: 1995 ident: 2024050309502546800_CIT0051 article-title: Purification and properties of publication-title: Journal of Biochemistry contributor: fullname: Ôba – volume: 287 start-page: 14412 year: 2012 ident: 2024050309502546800_CIT0056 article-title: l-Galactono-1,4-lactone dehydrogenase (l-GalLDH) forms part of three subcomplexes of mitochondrial complex I in Arabidopsis thaliana publication-title: Journal of Biological Chemistry doi: 10.1074/jbc.M111.305144 contributor: fullname: Schertl |
SSID | ssj0005055 |
Score | 2.493363 |
Snippet | L-Ascorbic acid (AsA, vitamin C) is a pivotal dietary nutrient with multifaceted importance in living organisms. In plants, the Smirnoff-Wheeler (SW) pathway... Abstract l-Ascorbic acid (AsA, vitamin C) is a pivotal dietary nutrient with multifaceted importance in living organisms. In plants, the Smirnoff–Wheeler... l-Ascorbic acid (AsA, vitamin C) is a pivotal dietary nutrient with multifaceted importance in living organisms. In plants, the Smirnoff-Wheeler pathway is the... |
SourceID | proquest crossref pubmed |
SourceType | Aggregation Database Index Database |
StartPage | 2754 |
Title | Structural insights into the Smirnoff-Wheeler pathway for vitamin C production in the Amazon fruit Camu-Camu |
URI | https://www.ncbi.nlm.nih.gov/pubmed/38224521 https://search.proquest.com/docview/2915570843 |
Volume | 75 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1bb9MwFLZgILQXxJ1yk5HGU2WWxs7Fj6OAJtDQUDdpb5HjCwsiyZSmgPrrObZz6QaVgBerimWnOt-n4-P4O8cI7SUQlaeGpQTWU0EYrACEUzkjNJKR5JJK7gppH32KD0_Zh7PobNSquuySNn8t13_MK_kfVOEZ4GqzZP8B2WFSeAC_AV9oAWFo_wrjhSv-2hXOWNpttlVXddHkoiyaqjaGgL-FtaWxJVTPfwgv0PxetKK0CX9WoKV8Bdle8nhQirXVHzarop3ORbkittkSxV66ISCv2963uDu8mi9dutg5zDdQZWGlr1IW9aAKEmPnsf3_g9JyuRTT441O3ejCXYxkDx-sJLyevn0VJkerqlhvfr8ImVMLep-mvc9lcUBC5heD3zy6r3b19WduEW6EDnxq5ga6F6WDl1o9bOTTra-U0O67rqMbIfgj6wg_fh6LykMQGHWpm_C2fXjXfvemXXSrH3s5btmyGXFByckddLvDAR94atxF13R1D91842C4j76N_MA9P7C1LwaY8VV-4I4fGPiBO37gOR75AUPdQM8P7PiBB348QKfv353MD0l3uwaRIUtawqJcp1GqOFM0V8rwhBrONVdxIkKZqMCEPIXWno1rmeQyYlrMjKHamDjIY_oQ7VR1pR8jzGWk7L48EjRnVMRcBoGReRqqmVLc8Ana622XXfgiKpkXP9AMrJ111p6gl71dM3By9uRKVLpeLbPQ3mKQBCmjE_TIG3yYqAfoydaep2h3JN4ztAO2188hlGzzF44IvwA6AHmq |
link.rule.ids | 315,783,787,27936,27937 |
linkProvider | Colorado Alliance of Research Libraries |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Structural+insights+into+the+Smirnoff-Wheeler+pathway+for+vitamin+C+production+in+the+Amazon+fruit+Camu-Camu&rft.jtitle=Journal+of+experimental+botany&rft.au=Vargas%2C+Jhon+A&rft.au=Sculaccio%2C+Susana+A&rft.au=Pinto%2C+Andressa+P+A&rft.au=Pereira%2C+Humberto+D%27Muniz&rft.date=2024-05-03&rft.eissn=1460-2431&rft_id=info:doi/10.1093%2Fjxb%2Ferae016&rft_id=info%3Apmid%2F38224521&rft.externalDocID=38224521 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0022-0957&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0022-0957&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0022-0957&client=summon |