Microssatellite markers for plant variety protection of clonally propagated forest trees: a case study in teak (Tectona grandis L.f.)

• Published in: Silvae genetica Vol. 72; no. 1; pp. 189 - 199
• Main Authors: Queiroz, Mariana de M., Arriel, Daniele A.A., Caldeira, Sidney F., Higa, Antônio R., Araújo, Stefânia P., Sebbenn, Alexandre M., Grattapaglia, Dario
• Format: Journal Article
• Language: English
• Published: Sciendo 01.01.2023
• Subjects: microsatellites; paternity test; plant variety protection; probability of identity; relatedness; Tectona grandis
• ISSN: 2509-8934; 2509-8934
• DOI: 10.2478/sg-2023-0019

Forest trees cultivars developed by breeders have been increasingly deployed as clones, following long generations of breeding and testing. An established protocol for distinctiveness, uniformity and stability (DUS) testing becomes an essential element for protecting the intellectual property rights associated with these clones. DUS testing with morphological descriptors has, however, shown limitations in categorically distinguishing cultivars, especially with narrow genetic base. DNA fingerprinting based on microsatellite markers has been a powerful tool to discriminate clones. Teak ( ) is an economically valuable exotic timber species planted in Brazil. We assessed the individual and combined performance of a selected set of 21 teak microsatellites for identity analysis and parentage testing in a sample of 50 clones planted in Brazil. The clones displayed high genetic diversity attributable to their wide provenance origin. The 21 microsatellites combined provide high power of individual identification with a combined probability of identity of 1.84E-23 for unrelated individuals, and 4.82E-09 for full-sibs, and a power of paternity exclusion higher than 99.99999 % in all testing scenarios. Variable subsets of these 21 markers still provide abundant power of discrimination, although a recommended set should include a minimum of 12 markers with higher information content and reliable genotyping performance. Relatedness and genetic distance analyses revealed unexpected identities or significant recent shared ancestry among otherwise considered unique clones. These results advocate for the importance of including DNA markers, at least as discretionary complementary descriptors to the 22 morphological traits currently adopted for plant variety protection of teak cultivars in Brazil.