The RNA Binding Proteins YTHDC1 and FMRP Regulate the Nuclear Export of N 6 -Methyladenosine-Modified Hepatitis B Virus Transcripts and Affect the Viral Life Cycle

• Published in: Journal of virology Vol. 95; no. 13; p. e0009721
• Main Authors: Kim, Geon-Woo, Imam, Hasan, Siddiqui, Aleem
• Format: Journal Article
• Language: English
• Published: United States 10.06.2021
• Subjects: Active Transport, Cell Nucleus - genetics; Adenosine - analogs & derivatives; Adenosine - chemistry; Carrier Proteins - metabolism; Cell Line, Tumor; Cell Nucleus - metabolism; DNA Replication - genetics; DNA, Viral - chemistry; Fragile X Mental Retardation Protein - genetics; Fragile X Mental Retardation Protein - metabolism; Gene Expression Regulation, Viral - genetics; Hepatitis B virus - genetics; Humans; Nerve Tissue Proteins - genetics; Nerve Tissue Proteins - metabolism; RNA Splicing Factors - genetics; RNA Splicing Factors - metabolism; RNA Stability - genetics; Transcription, Genetic - genetics; Virus Replication - genetics; N6-methyladenosine; HBV life cycle; FMRP; YTHDC1; nuclear export; hepatitis B virus
• ISSN: 0022-538X; 1098-5514
• DOI: 10.1128/JVI.00097-21

YTHDC1 and fragile X mental retardation protein (FMRP) bind -methyladenosine (m A)-modified RNAs and facilitate their transport to the cytoplasm. Here, we investigated the role of these proteins in hepatitis B virus (HBV) gene expression and life cycle. We have previously reported that HBV transcripts are m A methylated, and this modification regulates the viral life cycle. HBV is particularly interesting, as its DNA genome upon transcription gives rise to a pregenomic RNA (pgRNA), which serves as a template for reverse transcription to produce the relaxed circular DNA that transforms into a covalently closed circular DNA (cccDNA). While m A modification negatively affects RNA stability and translation of viral transcripts, our current results revealed the possibility that it positively affects pgRNA encapsidation in the cytoplasm. Thus, it plays a differential dual role in the virus life cycle. YTHDC1 as well as FMRP recognize m A-methylated HBV transcripts and facilitate their transport to the cytoplasm. In cells depleted with YTHDC1 or FMRP, viral transcripts accumulate in the nucleus to affect the viral life cycle. Most importantly, the core-associated DNA and subsequent cccDNA syntheses are dramatically affected in FMRP- or YTHDC1-silenced cells. This study highlights the functional relevance of YTHDC1 and FMRP in the HBV life cycle with the potential to arrest liver disease pathogenesis. YTHDC1 and FMRP have been recently implicated in the nuclear export of m A modified mRNAs. Here, we show that FMRP and YTHDC1 proteins bind with m A-modified HBV transcripts and facilitate their nuclear export. In the absence of FMRP and YTHDC1, HBV transcripts accumulate in the nucleus to reduce reverse transcription in HBV core particles and subsequently the cccDNA synthesis. Our study shows how m A binding proteins can regulate the HBV life cycle by facilitating the nuclear export of m A-modified HBV RNA.