Object-oriented implementations of the MPDATA advection equation solver in C++, Python and Fortran

• Published in: arXiv.org
• Main Authors: Arabas, Sylwester, Jarecka, Dorota, Jaruga, Anna, Fijałkowski, Maciej
• Format: Paper Journal Article
• Language: English
• Published: Ithaca Cornell University Library, arXiv.org 19.03.2013
• Subjects: Advection; Algorithms; C++ (programming language); Computer Science - Mathematical Software; Containers; FORTRAN; Maintainability; Object oriented programming; Physics - Atmospheric and Oceanic Physics; Physics - Computational Physics; Programming languages; Solvers; Source code
• ISSN: 2331-8422
• DOI: 10.48550/arxiv.1301.1334

Three object-oriented implementations of a prototype solver of the advection equation are introduced. The presented programs are based on Blitz++ (C++), NumPy (Python), and Fortran's built-in array containers. The solvers include an implementation of the Multidimensional Positive-Definite Advective Transport Algorithm (MPDATA). The introduced codes exemplify how the application of object-oriented programming (OOP) techniques allows to reproduce the mathematical notation used in the literature within the program code. A discussion on the tradeoffs of the programming language choice is presented. The main angles of comparison are code brevity and syntax clarity (and hence maintainability and auditability) as well as performance. In the case of Python, a significant performance gain is observed when switching from the standard interpreter (CPython) to the PyPy implementation of Python. Entire source code of all three implementations is embedded in the text and is licensed under the terms of the GNU GPL license.