Estimating robustness of the tileShuffle method with repeated probes

In this paper the TileShuffle method is evaluated as a search method for candidate lncRNAs at 8q24.2. The method is run on three microarrays. Microarrays which all contained the same sample and repeated copies of tiled probes. This allows the coherence of the selection method within and between micr...

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Main Authors Lund, Sigrun Helga, Sigurdsson, Asgeir, Gudjonsson, Sigurjon Axel, Gudmundsson, Julius, Gudbjartsson, Daniel Fannar, Rafnar, Thorunn, Stefansson, Kari, Stefansson, Gunnar
Format Journal Article
LanguageEnglish
Published 12.03.2014
Subjects
Quantitative Biology - Quantitative Methods
Statistics - Applications
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Summary:In this paper the TileShuffle method is evaluated as a search method for candidate lncRNAs at 8q24.2. The method is run on three microarrays. Microarrays which all contained the same sample and repeated copies of tiled probes. This allows the coherence of the selection method within and between microarrays to be estimated by Monte Carlo simulations on the repeated probes.
DOI:10.48550/arxiv.1403.3028